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BioLiP
Download all results in tab-seperated text for 14664 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    11801 7b04:U (2.97) BS01 HEM ? GO:0020037 ... Q1PZD4 N/A
    11802 7b04:V (2.97) BS05 HEM 1.7.99.4 GO:0009055 ... Q1PZD5 N/A
    11803 7b04:X (2.97) BS01 HEM ? GO:0020037 ... Q1PZD4 N/A
    11804 7bi1:A (1.5) BS01 HEM 1.11.1.11 GO:0004601 ... Q43758 33826799
    11805 7bok:A (3.7) BS01 HEM 1.11.1.7 GO:0004601 ... A0R4G9 33853951
    11806 7bok:B (3.7) BS01 HEM 1.11.1.7 GO:0004601 ... A0R4G9 33853951
    11807 7bok:C (3.7) BS01 HEM 1.11.1.7 GO:0004601 ... A0R4G9 33853951
    11808 7bok:D (3.7) BS01 HEM 1.11.1.7 GO:0004601 ... A0R4G9 33853951
    11809 7bok:E (3.7) BS01 HEM 1.11.1.7 GO:0004601 ... A0R4G9 33853951
    11810 7bok:F (3.7) BS01 HEM 1.11.1.7 GO:0004601 ... A0R4G9 33853951
    11811 7bwh:A (1.4) BS01 HEM ? N/A A0A1D1VNB4 32483879
    11812 7c52:C (2.89) BS01 HEM ? GO:0005506 ... D2Z0P5 33597527
    11813 7c52:C (2.89) BS02 HEM ? GO:0005506 ... D2Z0P5 33597527
    11814 7c52:C (2.89) BS03 HEM ? GO:0005506 ... D2Z0P5 33597527
    11815 7c52:C (2.89) BS04 HEM ? GO:0005506 ... D2Z0P5 33597527
    11816 7c73:A (2.7) BS01 HEM 1.11.1.7 GO:0004601 ... L8ICE9 33427997
    11817 7c74:A (2.73) BS02 HEM 1.11.1.7 GO:0004601 ... L8ICE9 33427997
    11818 7c75:A (2.7) BS02 HEM 1.11.1.7 GO:0004601 ... L8ICE9 33427997
    11819 7c9r:C (2.82) BS01 HEM ? GO:0005506 ... H8Z3S2 33009385
    11820 7c9r:C (2.82) BS02 HEM ? GO:0005506 ... H8Z3S2 33009385
    11821 7c9r:C (2.82) BS03 HEM ? GO:0005506 ... H8Z3S2 33009385
    11822 7c9r:C (2.82) BS04 HEM ? GO:0005506 ... H8Z3S2 33009385
    11823 7cat:A (2.5) BS01 HEM 1.11.1.6 GO:0004096 ... P00432 3856839
    11824 7cat:B (2.5) BS01 HEM 1.11.1.6 GO:0004096 ... P00432 3856839
    11825 7cb9:A (1.9) BS01 HEM 1.14.14.175 GO:0004497 ... S4UX02 N/A
    11826 7ccf:A (2.8) BS01 HEM ? GO:0004497 ... Q8NSW2 33712426
    11827 7ccp:A (2.2) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 8396973
    11828 7cen:A (2.35) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    11829 7cez:A (1.57) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    11830 7cji:E (2.35) BS01 HEM ? GO:0005506 ... P12238 33953929
    11831 7cji:F (2.35) BS01 HEM ? GO:0005506 ... P12239 33953929
    11832 7cji:e (2.35) BS01 HEM ? GO:0005506 ... P12238 33953929
    11833 7cji:f (2.35) BS01 HEM ? GO:0005506 ... P12239 33953929
    11834 7cjj:E (2.4) BS01 HEM ? GO:0005506 ... P12238 33953929
    11835 7cjj:F (2.4) BS01 HEM ? GO:0005506 ... P12239 33953929
    11836 7cjj:e (2.4) BS01 HEM ? GO:0005506 ... P12238 33953929
    11837 7cjj:f (2.4) BS01 HEM ? GO:0005506 ... P12239 33953929
    11838 7cka:A (1.06) BS01 HEM ? GO:0004392 ... I1JW65 33839679
    11839 7ckn:A (1.55) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11840 7ckn:B (1.55) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11841 7cl7:A (1.95) BS01 HEM ? GO:0004497 ... Q82GL5 N/A
    11842 7cl8:A (1.42) BS01 HEM ? GO:0004497 ... Q82GL5 36847541
    11843 7cl9:A (1.95) BS01 HEM ? GO:0004497 ... Q82GL5 N/A
    11844 7con:A (1.46) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11845 7con:B (1.46) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11846 7coo:A (1.49) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11847 7coo:B (1.49) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11848 7cp8:A (1.68) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11849 7cp8:B (1.68) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11850 7cpp:A (2.0) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 2713354
    11851 7cub:A (2.55) BS01 HEM 7.1.1.3 GO:0004129 ... P0ABI8 34417297
    11852 7cue:A (2.75) BS01 HEM ? GO:0004601 ... P69905 N/A
    11853 7cue:B (2.75) BS01 HEM ? GO:0004601 ... P68871 N/A
    11854 7cue:C (2.75) BS01 HEM ? GO:0004601 ... P69905 N/A
    11855 7cue:D (2.75) BS01 HEM ? GO:0004601 ... P68871 N/A
    11856 7cue:E (2.75) BS01 HEM ? N/A B0LFQ8 N/A
    11857 7cue:F (2.75) BS01 HEM ? N/A B0LFQ8 N/A
    11858 7cue:H (2.75) BS01 HEM ? N/A B0LFQ8 N/A
    11859 7cuq:A (2.64) BS01 HEM 7.1.1.3 GO:0004129 ... P0ABI8 34417297
    11860 7cuw:A (2.63) BS01 HEM 7.1.1.3 GO:0004129 ... P0ABI8 34417297
    11861 7cvr:A (1.6) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11862 7cvr:B (1.6) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11863 7cx6:A (1.69) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11864 7cx6:B (1.69) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11865 7cx8:A (1.7) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11866 7cx8:B (1.7) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11867 7czi:A (1.64) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11868 7czi:B (1.64) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11869 7czl:E (3.78) BS01 HEM ? GO:0009523 ... P12238 33495333
    11870 7czl:F (3.78) BS01 HEM ? GO:0009523 ... P12239 33495333
    11871 7czl:e (3.78) BS02 HEM ? GO:0009523 ... P12238 33495333
    11872 7d0t:A (1.74) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11873 7d0t:B (1.74) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11874 7d0u:A (1.68) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11875 7d0u:B (1.68) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11876 7d1f:A (1.45) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11877 7d1f:B (1.45) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    11878 7d1t:E (1.95) BS01 HEM ? GO:0005506 ... P12238 33753866
    11879 7d1t:F (1.95) BS01 HEM ? GO:0009523 ... P12239 33753866
    11880 7d1t:e (1.95) BS01 HEM ? GO:0005506 ... P12238 33753866
    11881 7d1t:f (1.95) BS01 HEM ? GO:0009523 ... P12239 33753866
    11882 7d1u:E (2.08) BS01 HEM ? GO:0005506 ... P12238 33753866
    11883 7d1u:F (2.08) BS01 HEM ? GO:0009523 ... P12239 33753866
    11884 7d1u:e (2.08) BS01 HEM ? GO:0005506 ... P12238 33753866
    11885 7d1u:f (2.08) BS01 HEM ? GO:0009523 ... P12239 33753866
    11886 7d3e:A (2.8) BS04 HEM 1.11.1.-
    1.6.3.1
    GO:0004601 ... Q9NRD9 33420071
    11887 7d3e:A (2.8) BS05 HEM 1.11.1.-
    1.6.3.1
    GO:0004601 ... Q9NRD9 33420071
    11888 7d3e:C (2.8) BS04 HEM 1.11.1.-
    1.6.3.1
    GO:0004601 ... Q9NRD9 33420071
    11889 7d3e:C (2.8) BS05 HEM 1.11.1.-
    1.6.3.1
    GO:0004601 ... Q9NRD9 33420071
    11890 7d3f:A (2.6) BS06 HEM 1.11.1.-
    1.6.3.1
    GO:0004601 ... Q9NRD9 33420071
    11891 7d3f:A (2.6) BS07 HEM 1.11.1.-
    1.6.3.1
    GO:0004601 ... Q9NRD9 33420071
    11892 7d3f:C (2.6) BS06 HEM 1.11.1.-
    1.6.3.1
    GO:0004601 ... Q9NRD9 33420071
    11893 7d3f:C (2.6) BS07 HEM 1.11.1.-
    1.6.3.1
    GO:0004601 ... Q9NRD9 33420071
    11894 7d52:A (2.2) BS02 HEM 1.11.1.7 GO:0004601 ... L8ICE9 33427997
    11895 7d8m:A (2.0) BS01 HEM ? GO:0004601 ... A0A2P1C6N4 34059116
    11896 7d9f:A (1.85) BS02 HEM 1.5.99.6 GO:0000166 ... Q9HXS8 34741591
    11897 7d9f:B (1.85) BS02 HEM 1.5.99.6 GO:0000166 ... Q9HXS8 34741591
    11898 7d9g:A (2.4) BS02 HEM 1.5.99.6 GO:0000166 ... Q9HXS8 34741591
    11899 7d9g:B (2.4) BS02 HEM 1.5.99.6 GO:0000166 ... Q9HXS8 34741591
    11900 7d9h:A (2.31) BS02 HEM 1.5.99.6 GO:0000166 ... Q9HXS8 34741591
    11901 7d9h:B (2.31) BS02 HEM 1.5.99.6 GO:0000166 ... Q9HXS8 34741591
    11902 7d9i:A (2.1) BS02 HEM 1.5.99.6 GO:0000166 ... Q9HXS8 34741591
    11903 7d9i:B (2.1) BS02 HEM 1.5.99.6 GO:0000166 ... Q9HXS8 34741591
    11904 7d9j:A (2.19) BS02 HEM 1.5.99.6 GO:0000166 ... Q9HXS8 34741591
    11905 7d9j:B (2.19) BS02 HEM 1.5.99.6 GO:0000166 ... Q9HXS8 34741591
    11906 7d9r:B (3.7) BS02 HEM 4.6.1.2 GO:0004016 ... Q02153 34535643
    11907 7d9s:B (3.9) BS02 HEM 4.6.1.2 GO:0004016 ... Q02153 34535643
    11908 7dao:A (2.28) BS02 HEM 1.11.1.7 GO:0004601 ... L8ICE9 N/A
    11909 7ddr:A (1.5) BS01 HEM N/A GO:0015671 ... N/A 34430810
    11910 7dds:A (2.3) BS01 HEM N/A GO:0015671 ... N/A 34430810
    11911 7ddt:A (2.9) BS01 HEM N/A GO:0015671 ... N/A 34430810
    11912 7ddu:A (1.9) BS01 HEM ? GO:0005344 ... R9S002 34430810
    11913 7ddu:C (1.9) BS01 HEM ? GO:0005344 ... R9S002 34430810
    11914 7de5:A (1.55) BS01 HEM 1.11.1.7 GO:0004601 ... L8ICE9 33389415
    11915 7deg:A (3.4) BS02 HEM ? GO:0004129 ... O67937 33665933
    11916 7deg:D (3.4) BS02 HEM ? GO:0004129 ... O67937 33665933
    11917 7dgj:A (1.6) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11918 7dgj:A (1.6) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11919 7dgj:B (1.6) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11920 7dgj:B (1.6) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11921 7dgk:A (1.75) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11922 7dgk:A (1.75) BS03 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11923 7dgk:B (1.75) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11924 7dgk:B (1.75) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11925 7dgl:A (1.91) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11926 7dgl:A (1.91) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11927 7dgl:B (1.91) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11928 7dgl:B (1.91) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11929 7dgm:A (1.62) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11930 7dgm:A (1.62) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11931 7dgm:B (1.62) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11932 7dgm:B (1.62) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11933 7dgn:A (2.35) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11934 7dgn:A (2.35) BS03 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11935 7dgn:B (2.35) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11936 7dgn:B (2.35) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11937 7dgo:A (2.0) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11938 7dgo:A (2.0) BS06 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11939 7dgo:B (2.0) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11940 7dgo:B (2.0) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 33578251
    11941 7dgq:m (5.0) BS01 HEM ? GO:0005739 ... P00157 34913730
    11942 7dgq:m (5.0) BS02 HEM ? GO:0005739 ... P00157 34913730
    11943 7dgq:y (5.0) BS01 HEM ? GO:0005739 ... P00157 34913730
    11944 7dgq:y (5.0) BS02 HEM ? GO:0005739 ... P00157 34913730
    11945 7dgr:m (4.6) BS01 HEM ? GO:0005739 ... P00157 34913730
    11946 7dgr:m (4.6) BS02 HEM ? GO:0005739 ... P00157 34913730
    11947 7dgr:y (4.6) BS01 HEM ? GO:0005739 ... P00157 34913730
    11948 7dgr:y (4.6) BS02 HEM ? GO:0005739 ... P00157 34913730
    11949 7dgs:m (7.8) BS01 HEM ? GO:0005739 ... P00157 34913730
    11950 7dgs:m (7.8) BS02 HEM ? GO:0005739 ... P00157 34913730
    11951 7dgs:y (7.8) BS01 HEM ? GO:0005739 ... P00157 34913730
    11952 7dgs:y (7.8) BS02 HEM ? GO:0005739 ... P00157 34913730
    11953 7di3:A (1.69) BS01 HEM ? GO:0004497 ... A0A160P685 34258016
    11954 7di8:A (3.2) BS01 HEM 1.11.1.6 GO:0004096 ... P00432 33469549
    11955 7di8:B (3.2) BS01 HEM 1.11.1.6 GO:0004096 ... P00432 33469549
    11956 7di8:C (3.2) BS01 HEM 1.11.1.6 GO:0004096 ... P00432 33469549
    11957 7di8:D (3.2) BS01 HEM 1.11.1.6 GO:0004096 ... P00432 33469549
    11958 7dih:A (1.5) BS01 HEM ? GO:0005344 ... O66586 N/A
    11959 7dih:B (1.5) BS01 HEM ? GO:0005344 ... O66586 N/A
    11960 7dkf:C1 (8.3) BS01 HEM ? GO:0005739 ... P00157 34913730
    11961 7dkf:C1 (8.3) BS02 HEM ? GO:0005739 ... P00157 34913730
    11962 7dkf:O1 (8.3) BS01 HEM ? GO:0005739 ... P00157 34913730
    11963 7dkf:O1 (8.3) BS02 HEM ? GO:0005739 ... P00157 34913730
    11964 7dlh:A (1.789) BS01 HEM 1.11.1.7 GO:0004601 ... A0A3L6SKP5 N/A
    11965 7dlk:A (2.1) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004325 ... P39597 34687768
    11966 7dlk:B (2.1) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004325 ... P39597 34687768
    11967 7dlk:C (2.1) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004325 ... P39597 34687768
    11968 7dlk:D (2.1) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004325 ... P39597 34687768
    11969 7dlk:E (2.1) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004325 ... P39597 34687768
    11970 7dlk:F (2.1) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004325 ... P39597 34687768
    11971 7dlq:A (1.773) BS01 HEM 1.11.1.7 GO:0004601 ... P80025 33882424
    11972 7dls:A (2.06) BS01 HEM ? GO:0004497 ... A0A160P685 34258016
    11973 7dmr:A (2.2) BS02 HEM 1.11.1.7 GO:0004601 ... L8ICE9 33427997
    11974 7dn6:A (1.696) BS01 HEM 1.11.1.7 GO:0004601 ... P80025 33882424
    11975 7dn7:A (1.7) BS01 HEM 1.11.1.7 GO:0004601 ... P80025 33882424
    11976 7dnz:B (3.6) BS01 HEM 7.6.2.5 GO:0000139 ... Q9NP58 35950458
    11977 7dvo:A (1.8) BS01 HEM 1.7.1.14 GO:0004497 ... P23295 34001620
    11978 7dvo:B (1.8) BS01 HEM 1.7.1.14 GO:0004497 ... P23295 34001620
    11979 7dvr:A (1.7) BS01 HEM ? GO:0003700 ... Q8E4J9 33850260
    11980 7dvt:A (2.09) BS01 HEM ? GO:0003700 ... Q8E4J9 33850260
    11981 7dvu:A (2.1) BS01 HEM ? GO:0003700 ... Q8E4J9 33850260
    11982 7dxa:e (3.14) BS02 HEM ? GO:0005506 ... P12238 34226692
    11983 7dxh:e (3.14) BS02 HEM ? GO:0005506 ... P12238 34226692
    11984 7dy3:A (1.4) BS01 HEM ? GO:0004601 ... P69905 N/A
    11985 7dy3:B (1.4) BS01 HEM ? GO:0004601 ... P68871 N/A
    11986 7dy3:C (1.4) BS01 HEM ? GO:0004601 ... P69905 N/A
    11987 7dy3:D (1.4) BS01 HEM ? GO:0004601 ... P68871 N/A
    11988 7dy3:E (1.4) BS01 HEM ? GO:0004601 ... P69905 N/A
    11989 7dy3:F (1.4) BS01 HEM ? GO:0004601 ... P68871 N/A
    11990 7dy3:G (1.4) BS01 HEM ? GO:0004601 ... P69905 N/A
    11991 7dy3:H (1.4) BS01 HEM ? GO:0004601 ... P68871 N/A
    11992 7dy4:A (1.3) BS01 HEM ? GO:0004601 ... P69905 N/A
    11993 7dy4:B (1.3) BS01 HEM ? GO:0004601 ... P68871 N/A
    11994 7dy4:C (1.3) BS01 HEM ? GO:0004601 ... P69905 N/A
    11995 7dy4:D (1.3) BS01 HEM ? GO:0004601 ... P68871 N/A
    11996 7dy4:E (1.3) BS01 HEM ? GO:0004601 ... P69905 N/A
    11997 7dy4:F (1.3) BS01 HEM ? GO:0004601 ... P68871 N/A
    11998 7dy4:G (1.3) BS01 HEM ? GO:0004601 ... P69905 N/A
    11999 7dy4:H (1.3) BS01 HEM ? GO:0004601 ... P68871 N/A
    12000 7e0o:A (3.337) BS02 HEM 1.13.11.52 GO:0002376 ... P14902 34110158

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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