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BioLiP
Download all results in tab-seperated text for 14664 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    10401 6hbw:A (2.0) BS01 HEM ? GO:0004601 ... P69905 9830011
    10402 6hbw:B (2.0) BS01 HEM ? GO:0004601 ... P68871 9830011
    10403 6hbw:C (2.0) BS01 HEM ? GO:0004601 ... P69905 9830011
    10404 6hbw:D (2.0) BS01 HEM ? GO:0004601 ... P68871 9830011
    10405 6hcy:A (3.1) BS03 HEM 1.16.1.- GO:0000139 ... Q687X5 30337524
    10406 6hcy:B (3.1) BS03 HEM 1.16.1.- GO:0000139 ... Q687X5 30337524
    10407 6hcy:C (3.1) BS02 HEM 1.16.1.- GO:0000139 ... Q687X5 30337524
    10408 6hd1:A (3.8) BS02 HEM 1.16.1.- GO:0000139 ... Q687X5 30337524
    10409 6hd1:B (3.8) BS03 HEM 1.16.1.- GO:0000139 ... Q687X5 30337524
    10410 6hd1:C (3.8) BS02 HEM 1.16.1.- GO:0000139 ... Q687X5 30337524
    10411 6hit:A (2.5) BS01 HEM ? GO:0004601 ... O42425 31397324
    10412 6hit:B (2.5) BS01 HEM ? GO:0004601 ... B3F9D7 31397324
    10413 6hit:C (2.5) BS01 HEM ? GO:0004601 ... O42425 31397324
    10414 6hit:D (2.5) BS01 HEM ? GO:0004601 ... B3F9D7 31397324
    10415 6hit:E (2.5) BS01 HEM ? GO:0004601 ... O42425 31397324
    10416 6hit:F (2.5) BS01 HEM ? GO:0004601 ... B3F9D7 31397324
    10417 6hit:G (2.5) BS01 HEM ? GO:0004601 ... O42425 31397324
    10418 6hit:H (2.5) BS01 HEM ? GO:0004601 ... B3F9D7 31397324
    10419 6hk2:A (1.55) BS01 HEM ? GO:0004601 ... P69905 32679799
    10420 6hk2:B (1.55) BS01 HEM ? GO:0004601 ... P68871 32679799
    10421 6hk2:C (1.55) BS01 HEM ? GO:0004601 ... P69905 32679799
    10422 6hk2:D (1.55) BS01 HEM ? GO:0004601 ... P68871 32679799
    10423 6hn8:A (1.997) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    10424 6hn8:B (1.997) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    10425 6hqd:A (1.8) BS01 HEM ? GO:0004497 ... G3LGZ6 30398864
    10426 6hqd:B (1.8) BS01 HEM ? GO:0004497 ... G3LGZ6 30398864
    10427 6hqd:C (1.8) BS01 HEM ? GO:0004497 ... G3LGZ6 30398864
    10428 6hqg:A (2.9) BS01 HEM ? GO:0004497 ... B4RGA3 30398864
    10429 6hqg:B (2.9) BS01 HEM ? GO:0004497 ... B4RGA3 30398864
    10430 6hqg:C (2.9) BS01 HEM ? GO:0004497 ... B4RGA3 30398864
    10431 6hqg:D (2.9) BS01 HEM ? GO:0004497 ... B4RGA3 30398864
    10432 6hqk:A (1.57) BS01 HEM 1.14.14.- GO:0004497 ... P0DPQ7 31235604
    10433 6hql:A (1.49) BS01 HEM 1.14.14.- GO:0004497 ... P0DPQ7 31235604
    10434 6hqm:A (1.85) BS01 HEM 1.14.14.- GO:0004497 ... P0DPQ7 31235604
    10435 6hqn:A (1.87) BS01 HEM 1.14.14.- GO:0004497 ... P0DPQ7 31235604
    10436 6hqo:A (1.7) BS01 HEM 1.14.14.- GO:0004497 ... P0DPQ7 31235604
    10437 6hqp:A (1.62) BS01 HEM 1.14.14.- GO:0004497 ... P0DPQ7 31235604
    10438 6hqq:A (1.66) BS01 HEM 1.14.14.- GO:0004497 ... P0DPQ7 31235604
    10439 6hqr:A (1.79) BS01 HEM 1.14.14.- GO:0004497 ... P0DPQ7 31235604
    10440 6hqs:A (2.17) BS01 HEM 1.14.14.- GO:0004497 ... P0DPQ7 31235604
    10441 6hqt:A (1.85) BS01 HEM 1.14.14.- GO:0004497 ... P0DPQ7 31235604
    10442 6hqw:A (2.9) BS01 HEM ? GO:0004497 ... Q2GBV5 30398864
    10443 6hqw:B (2.9) BS01 HEM ? GO:0004497 ... Q2GBV5 30398864
    10444 6hu9:C (3.35) BS01 HEM 7.1.1.8 GO:0005739 ... P00163 30598554
    10445 6hu9:C (3.35) BS02 HEM 7.1.1.8 GO:0005739 ... P00163 30598554
    10446 6hu9:N (3.35) BS01 HEM 7.1.1.8 GO:0005739 ... P00163 30598554
    10447 6hu9:N (3.35) BS02 HEM 7.1.1.8 GO:0005739 ... P00163 30598554
    10448 6hwh:Y (3.3) BS01 HEM 7.1.1.8 GO:0008121 ... A0R052 30518849
    10449 6hwh:Y (3.3) BS02 HEM 7.1.1.8 GO:0008121 ... A0R052 30518849
    10450 6hwh:b (3.3) BS02 HEM 7.1.1.8 GO:0008121 ... A0R052 30518849
    10451 6hwh:b (3.3) BS03 HEM 7.1.1.8 GO:0008121 ... A0R052 30518849
    10452 6i2z:A (3.2) BS01 HEM 2.7.7.65 GO:0019825 ... Q7VTL8 31559835
    10453 6i2z:B (3.2) BS01 HEM 2.7.7.65 GO:0019825 ... Q7VTL8 31559835
    10454 6i3t:A (2.0) BS01 HEM 1.7.-.- GO:0005092 ... Q9ER97 31576217
    10455 6i40:A (1.9) BS01 HEM 1.7.-.- GO:0005092 ... Q9ER97 31576217
    10456 6i43:A (1.88) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... Q9RKQ2 31316799
    10457 6i43:B (1.88) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... Q9RKQ2 31316799
    10458 6i6g:A (1.85) BS01 HEM ? GO:0004601 ... Q9NAV7 31709063
    10459 6i6g:B (1.85) BS01 HEM ? GO:0004601 ... Q9NAV7 31709063
    10460 6i7c:A (1.88) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... Q9RKQ2 31709063
    10461 6i7c:B (1.88) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... Q9RKQ2 31709063
    10462 6i7f:A (1.85) BS01 HEM ? GO:0004601 ... Q9NAV7 31709063
    10463 6i7f:B (1.85) BS01 HEM ? GO:0004601 ... Q9NAV7 31709063
    10464 6i7z:A (1.78) BS01 HEM N/A GO:0004601 ... N/A 31316799
    10465 6i7z:B (1.78) BS01 HEM N/A GO:0004601 ... N/A 31316799
    10466 6i8e:A (1.78) BS01 HEM N/A GO:0004601 ... N/A 31316799
    10467 6i8e:B (1.78) BS01 HEM N/A GO:0004601 ... N/A 31316799
    10468 6i8i:A (1.83) BS01 HEM N/A GO:0004601 ... N/A 31316799
    10469 6i8i:B (1.83) BS01 HEM N/A GO:0004601 ... N/A 31316799
    10470 6i8j:A (1.9) BS01 HEM N/A GO:0004601 ... N/A 31316799
    10471 6i8j:B (1.9) BS01 HEM N/A GO:0004601 ... N/A 31316799
    10472 6i8k:A (1.98) BS01 HEM N/A GO:0004601 ... N/A 31316799
    10473 6i8k:B (1.98) BS01 HEM N/A GO:0004601 ... N/A 31316799
    10474 6i8o:A (1.7) BS01 HEM N/A GO:0004601 ... N/A 31316799
    10475 6i8o:B (1.7) BS01 HEM N/A GO:0004601 ... N/A 31316799
    10476 6i8p:A (1.73) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... Q9RKQ2 31316799
    10477 6i8p:B (1.73) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... Q9RKQ2 31316799
    10478 6i8q:A (1.74) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... Q9RKQ2 31316799
    10479 6i8q:B (1.74) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... Q9RKQ2 31316799
    10480 6i91:A (1.78) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... Q9RKQ2 N/A
    10481 6i91:B (1.78) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... Q9RKQ2 N/A
    10482 6iao:A (2.16) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 31125381
    10483 6iao:B (2.16) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 31125381
    10484 6iao:C (2.16) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 31125381
    10485 6iao:D (2.16) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 31125381
    10486 6ibn:A (2.18) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... Q9RKQ2 31316799
    10487 6ibn:B (2.18) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... Q9RKQ2 31316799
    10488 6ied:A (3.0) BS01 HEM 1.17.99.9 GO:0005515 ... P12946 30397130
    10489 6ihx:A (1.46) BS01 HEM ? GO:0004601 ... P01966 30444368
    10490 6ihx:B (1.46) BS01 HEM ? GO:0004601 ... P02070 30444368
    10491 6ihx:C (1.46) BS01 HEM ? GO:0004601 ... P01966 30444368
    10492 6ihx:D (1.46) BS01 HEM ? GO:0004601 ... P02070 30444368
    10493 6ii1:A (1.34) BS01 HEM ? GO:0004601 ... P01966 30444368
    10494 6ii1:B (1.34) BS01 HEM ? GO:0004601 ... P02070 30444368
    10495 6ii1:C (1.34) BS01 HEM ? GO:0004601 ... P01966 30444368
    10496 6ii1:D (1.34) BS01 HEM ? GO:0004601 ... P02070 30444368
    10497 6iq5:A (3.7) BS01 HEM 1.14.14.1
    4.2.1.152
    GO:0004497 ... Q16678 30553624
    10498 6iq5:B (3.7) BS01 HEM 1.14.14.1
    4.2.1.152
    GO:0004497 ... Q16678 30553624
    10499 6iss:A (1.53) BS01 HEM 1.11.1.14 GO:0000302 ... P06181 N/A
    10500 6iss:G (1.53) BS01 HEM 1.11.1.14 GO:0000302 ... P06181 N/A
    10501 6iyh:A (1.7) BS01 HEM ? GO:0004601 ... A0A1X8XL85 30904680
    10502 6iyh:B (1.7) BS01 HEM ? GO:0004601 ... A0A1X8XL86 30904680
    10503 6iyi:A (2.2) BS01 HEM ? GO:0004601 ... A0A1Z0YU11 30904680
    10504 6iyi:B (2.2) BS01 HEM ? GO:0004601 ... A0A1Z0YU12 30904680
    10505 6j3y:E (3.3) BS02 HEM N/A GO:0009523 ... N/A 31358960
    10506 6j3y:V (3.3) BS01 HEM ? GO:0005506 ... B6ZHF4 31358960
    10507 6j3y:e (3.3) BS02 HEM N/A GO:0009523 ... N/A 31358960
    10508 6j3y:v (3.3) BS01 HEM ? GO:0005506 ... B6ZHF4 31358960
    10509 6j3z:E (3.6) BS02 HEM N/A GO:0009523 ... N/A 31358960
    10510 6j3z:V (3.6) BS01 HEM ? GO:0005506 ... B6ZHF4 31358960
    10511 6j3z:e (3.6) BS02 HEM N/A GO:0009523 ... N/A 31358960
    10512 6j3z:v (3.6) BS01 HEM ? GO:0005506 ... B6ZHF4 31358960
    10513 6j40:E (3.8) BS02 HEM N/A GO:0009523 ... N/A 31358960
    10514 6j40:V (3.8) BS01 HEM ? GO:0005506 ... B6ZHF4 31358960
    10515 6j40:e (3.8) BS02 HEM N/A GO:0009523 ... N/A 31358960
    10516 6j40:v (3.8) BS01 HEM ? GO:0005506 ... B6ZHF4 31358960
    10517 6j79:A (3.331) BS03 HEM 1.14.14.18
    1.6.2.4
    GO:0003420 ... P00388
    P06762
    30883732
    10518 6j79:B (3.331) BS03 HEM 1.14.14.18
    1.6.2.4
    GO:0003420 ... P00388
    P06762
    30883732
    10519 6j7a:A (3.269) BS01 HEM 1.14.14.18
    1.6.2.4
    GO:0003420 ... P00388
    P06762
    30883732
    10520 6j7a:B (3.269) BS01 HEM 1.14.14.18
    1.6.2.4
    GO:0003420 ... P00388
    P06762
    30883732
    10521 6j7i:A (3.3) BS01 HEM 1.14.14.18
    1.6.2.4
    GO:0003420 ... P00388
    P06762
    30883732
    10522 6j7i:B (3.3) BS01 HEM 1.14.14.18
    1.6.2.4
    GO:0003420 ... P00388
    P06762
    30883732
    10523 6j82:A (2.202) BS01 HEM ? GO:0004497 ... A0A077KEB8 31636430
    10524 6j83:A (1.9) BS01 HEM ? GO:0004497 ... A0A077KEB8 31636430
    10525 6j84:A (2.0) BS01 HEM ? GO:0004497 ... A0A077KEB8 31636430
    10526 6j85:A (2.2) BS01 HEM ? GO:0004497 ... A0A1M4Y7D5 31636430
    10527 6j85:B (2.2) BS01 HEM ? GO:0004497 ... A0A1M4Y7D5 31636430
    10528 6j86:A (2.6) BS01 HEM ? GO:0004497 ... A0A1M4Y7D5 31636430
    10529 6j86:B (2.6) BS01 HEM ? GO:0004497 ... A0A1M4Y7D5 31636430
    10530 6j87:A (2.3) BS01 HEM ? GO:0004497 ... A0A1M4Y7D5 31636430
    10531 6j87:B (2.3) BS01 HEM ? GO:0004497 ... A0A1M4Y7D5 31636430
    10532 6j88:A (2.35) BS01 HEM ? GO:0004497 ... A0A1M4Y7D5 31636430
    10533 6j88:B (2.35) BS01 HEM ? GO:0004497 ... A0A1M4Y7D5 31636430
    10534 6j94:A (2.401) BS01 HEM 1.14.-.- GO:0004497 ... Q93VK5 32513704
    10535 6j94:B (2.401) BS01 HEM 1.14.-.- GO:0004497 ... Q93VK5 32513704
    10536 6j95:A (2.002) BS01 HEM 1.14.-.- GO:0004497 ... Q93VK5 32513704
    10537 6jbn:A (2.3) BS01 HEM N/A GO:0004601 ... N/A N/A
    10538 6jbn:B (2.3) BS01 HEM N/A GO:0004601 ... N/A N/A
    10539 6jlj:E (2.15) BS01 HEM ? GO:0005506 ... P12238 31624207
    10540 6jlj:F (2.15) BS01 HEM ? GO:0005506 ... P12239 31624207
    10541 6jlj:V (2.15) BS01 HEM ? GO:0005506 ... P0A387 31624207
    10542 6jlj:e (2.15) BS01 HEM ? GO:0005506 ... P12238 31624207
    10543 6jlj:f (2.15) BS01 HEM ? GO:0005506 ... P12239 31624207
    10544 6jlj:v (2.15) BS01 HEM ? GO:0005506 ... P0A387 31624207
    10545 6jlk:E (2.15) BS01 HEM ? GO:0005506 ... P12238 31624207
    10546 6jlk:F (2.15) BS01 HEM ? GO:0005506 ... P12239 31624207
    10547 6jlk:V (2.15) BS01 HEM ? GO:0005506 ... P0A387 31624207
    10548 6jlk:e (2.15) BS01 HEM ? GO:0005506 ... P12238 31624207
    10549 6jlk:f (2.15) BS01 HEM ? GO:0005506 ... P12239 31624207
    10550 6jlk:v (2.15) BS01 HEM ? GO:0005506 ... P0A387 31624207
    10551 6jll:E (2.15) BS01 HEM ? GO:0005506 ... P12238 31624207
    10552 6jll:F (2.15) BS01 HEM ? GO:0005506 ... P12239 31624207
    10553 6jll:V (2.15) BS01 HEM ? GO:0005506 ... P0A387 31624207
    10554 6jll:e (2.15) BS01 HEM ? GO:0005506 ... P12238 31624207
    10555 6jll:f (2.15) BS01 HEM ? GO:0005506 ... P12239 31624207
    10556 6jll:v (2.15) BS01 HEM ? GO:0005506 ... P0A387 31624207
    10557 6jlm:E (2.35) BS01 HEM ? GO:0005506 ... P12238 31624207
    10558 6jlm:F (2.35) BS01 HEM ? GO:0005506 ... P12239 31624207
    10559 6jlm:V (2.35) BS01 HEM ? GO:0005506 ... P0A387 31624207
    10560 6jlm:e (2.35) BS01 HEM ? GO:0005506 ... P12238 31624207
    10561 6jlm:f (2.35) BS01 HEM ? GO:0005506 ... P12239 31624207
    10562 6jlm:v (2.35) BS01 HEM ? GO:0005506 ... P0A387 31624207
    10563 6jln:E (2.4) BS01 HEM ? GO:0005506 ... P12238 31624207
    10564 6jln:F (2.4) BS01 HEM ? GO:0005506 ... P12239 31624207
    10565 6jln:V (2.4) BS01 HEM ? GO:0005506 ... P0A387 31624207
    10566 6jln:e (2.4) BS01 HEM ? GO:0005506 ... P12238 31624207
    10567 6jln:f (2.4) BS01 HEM ? GO:0005506 ... P12239 31624207
    10568 6jln:v (2.4) BS01 HEM ? GO:0005506 ... P0A387 31624207
    10569 6jlo:E (2.4) BS01 HEM ? GO:0005506 ... P12238 31624207
    10570 6jlo:F (2.4) BS01 HEM ? GO:0005506 ... P12239 31624207
    10571 6jlo:V (2.4) BS01 HEM ? GO:0005506 ... P0A387 31624207
    10572 6jlo:e (2.4) BS01 HEM ? GO:0005506 ... P12238 31624207
    10573 6jlo:f (2.4) BS01 HEM ? GO:0005506 ... P12239 31624207
    10574 6jlo:v (2.4) BS01 HEM ? GO:0005506 ... P0A387 31624207
    10575 6jlp:E (2.5) BS01 HEM ? GO:0005506 ... P12238 31624207
    10576 6jlp:F (2.5) BS01 HEM ? GO:0005506 ... P12239 31624207
    10577 6jlp:V (2.5) BS01 HEM ? GO:0005506 ... P0A387 31624207
    10578 6jlp:e (2.5) BS01 HEM ? GO:0005506 ... P12238 31624207
    10579 6jlp:f (2.5) BS01 HEM ? GO:0005506 ... P12239 31624207
    10580 6jlp:v (2.5) BS01 HEM ? GO:0005506 ... P0A387 31624207
    10581 6jlu:E (3.02) BS01 HEM N/A GO:0009523 ... N/A 31371578
    10582 6jlu:F (3.02) BS01 HEM N/A GO:0009523 ... N/A 31371578
    10583 6jlu:V (3.02) BS01 HEM ? GO:0005506 ... B6ZHF4 31371578
    10584 6jlu:e (3.02) BS01 HEM N/A GO:0009523 ... N/A 31371578
    10585 6jlu:f (3.02) BS01 HEM N/A GO:0009523 ... N/A 31371578
    10586 6jlu:v (3.02) BS01 HEM ? GO:0005506 ... B6ZHF4 31371578
    10587 6jlv:A (1.22) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    10588 6jlv:B (1.22) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    10589 6jnt:A (3.0) BS01 HEM 1.11.1.6 GO:0004096 ... P00432 30928615
    10590 6jnt:B (3.0) BS01 HEM 1.11.1.6 GO:0004096 ... P00432 30928615
    10591 6jnt:C (3.0) BS01 HEM 1.11.1.6 GO:0004096 ... P00432 30928615
    10592 6jnt:D (3.0) BS01 HEM 1.11.1.6 GO:0004096 ... P00432 30928615
    10593 6jnu:A (3.0) BS01 HEM 1.11.1.6 GO:0004096 ... P00432 30928615
    10594 6jnu:B (3.0) BS01 HEM 1.11.1.6 GO:0004096 ... P00432 30928615
    10595 6jnu:C (3.0) BS01 HEM 1.11.1.6 GO:0004096 ... P00432 30928615
    10596 6jnu:D (3.0) BS01 HEM 1.11.1.6 GO:0004096 ... P00432 30928615
    10597 6jo1:A (2.1) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    10598 6jo1:B (2.1) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 32157795
    10599 6jp1:A (1.99) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 31119219
    10600 6jp1:B (1.99) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 31119219

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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