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BioLiP
Download all results in tab-seperated text for 4792 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1801 3ucp:A (1.76) BS05 HEC ? GO:0016491 ... F8UWD6 22682743
    1802 3ucp:A (1.76) BS06 HEC ? GO:0016491 ... F8UWD6 22682743
    1803 3ucp:A (1.76) BS07 HEC ? GO:0016491 ... F8UWD6 22682743
    1804 3ucp:A (1.76) BS08 HEC ? GO:0016491 ... F8UWD6 22682743
    1805 3ucp:A (1.76) BS09 HEC ? GO:0016491 ... F8UWD6 22682743
    1806 3ucp:A (1.76) BS10 HEC ? GO:0016491 ... F8UWD6 22682743
    1807 3ucp:A (1.76) BS11 HEC ? GO:0016491 ... F8UWD6 22682743
    1808 3ufh:A (2.23) BS01 HEC ? GO:0016491 ... F8UWD6 22682743
    1809 3ufh:A (2.23) BS02 HEC ? GO:0016491 ... F8UWD6 22682743
    1810 3ufh:A (2.23) BS03 HEC ? GO:0016491 ... F8UWD6 22682743
    1811 3ufh:A (2.23) BS04 HEC ? GO:0016491 ... F8UWD6 22682743
    1812 3ufh:A (2.23) BS05 HEC ? GO:0016491 ... F8UWD6 22682743
    1813 3ufh:A (2.23) BS06 HEC ? GO:0016491 ... F8UWD6 22682743
    1814 3ufh:A (2.23) BS07 HEC ? GO:0016491 ... F8UWD6 22682743
    1815 3ufh:A (2.23) BS08 HEC ? GO:0016491 ... F8UWD6 22682743
    1816 3ufh:A (2.23) BS09 HEC ? GO:0016491 ... F8UWD6 22682743
    1817 3ufh:A (2.23) BS10 HEC ? GO:0016491 ... F8UWD6 22682743
    1818 3ufh:A (2.23) BS11 HEC ? GO:0016491 ... F8UWD6 22682743
    1819 3ufk:A (2.1) BS01 HEC ? GO:0016491 ... F8UWD6 22682743
    1820 3ufk:A (2.1) BS02 HEC ? GO:0016491 ... F8UWD6 22682743
    1821 3ufk:A (2.1) BS03 HEC ? GO:0016491 ... F8UWD6 22682743
    1822 3ufk:A (2.1) BS04 HEC ? GO:0016491 ... F8UWD6 22682743
    1823 3ufk:A (2.1) BS05 HEC ? GO:0016491 ... F8UWD6 22682743
    1824 3ufk:A (2.1) BS06 HEC ? GO:0016491 ... F8UWD6 22682743
    1825 3ufk:A (2.1) BS07 HEC ? GO:0016491 ... F8UWD6 22682743
    1826 3ufk:A (2.1) BS08 HEC ? GO:0016491 ... F8UWD6 22682743
    1827 3ufk:A (2.1) BS09 HEC ? GO:0016491 ... F8UWD6 22682743
    1828 3ufk:A (2.1) BS10 HEC ? GO:0016491 ... F8UWD6 22682743
    1829 3ufk:A (2.1) BS11 HEC ? GO:0016491 ... F8UWD6 22682743
    1830 3uu9:A (2.2) BS01 HEC 1.7.2.2 GO:0005509 ... L0DSL2 22281743
    1831 3uu9:A (2.2) BS02 HEC 1.7.2.2 GO:0005509 ... L0DSL2 22281743
    1832 3uu9:A (2.2) BS03 HEC 1.7.2.2 GO:0005509 ... L0DSL2 22281743
    1833 3uu9:A (2.2) BS04 HEC 1.7.2.2 GO:0005509 ... L0DSL2 22281743
    1834 3uu9:A (2.2) BS05 HEC 1.7.2.2 GO:0005509 ... L0DSL2 22281743
    1835 3uu9:A (2.2) BS06 HEC 1.7.2.2 GO:0005509 ... L0DSL2 22281743
    1836 3uu9:A (2.2) BS07 HEC 1.7.2.2 GO:0005509 ... L0DSL2 22281743
    1837 3uu9:A (2.2) BS08 HEC 1.7.2.2 GO:0005509 ... L0DSL2 22281743
    1838 3uu9:B (2.2) BS01 HEC 1.7.2.2 GO:0005509 ... L0DSL2 22281743
    1839 3uu9:B (2.2) BS02 HEC 1.7.2.2 GO:0005509 ... L0DSL2 22281743
    1840 3uu9:B (2.2) BS03 HEC 1.7.2.2 GO:0005509 ... L0DSL2 22281743
    1841 3uu9:B (2.2) BS04 HEC 1.7.2.2 GO:0005509 ... L0DSL2 22281743
    1842 3uu9:B (2.2) BS05 HEC 1.7.2.2 GO:0005509 ... L0DSL2 22281743
    1843 3uu9:B (2.2) BS06 HEC 1.7.2.2 GO:0005509 ... L0DSL2 22281743
    1844 3uu9:B (2.2) BS07 HEC 1.7.2.2 GO:0005509 ... L0DSL2 22281743
    1845 3uu9:B (2.2) BS08 HEC 1.7.2.2 GO:0005509 ... L0DSL2 22281743
    1846 3vrc:A (1.0) BS01 HEC ? GO:0005506 ... C7G528 22827326
    1847 3vrc:B (1.0) BS01 HEC ? GO:0005506 ... C7G528 22827326
    1848 3vrd:A (1.5) BS01 HEC ? GO:0005506 ... D0G7Q3 22827326
    1849 3vrd:A (1.5) BS02 HEC ? GO:0005506 ... D0G7Q3 22827326
    1850 3vrd:B (1.5) BS01 HEC ? GO:0000166 ... D0G7Q4 22827326
    1851 3vym:A (2.0) BS01 HEC ? GO:0005506 ... P15452 23035813
    1852 3wc8:A (1.8) BS01 HEC ? GO:0005515 ... P00004 24206001
    1853 3wfb:C (2.7) BS03 HEC ? GO:0005886 ... Q59646 24338896
    1854 3wfc:C (2.5) BS03 HEC ? GO:0005886 ... Q59646 24338896
    1855 3wfd:C (2.3) BS03 HEC ? GO:0005886 ... Q59646 24338896
    1856 3wfe:C (2.49) BS04 HEC ? GO:0005886 ... Q59646 24338896
    1857 3wui:A (1.8) BS01 HEC ? GO:0005515 ... P00004 24981551
    1858 3x15:A (1.6) BS01 HEC ? GO:0005506 ... O67504 25586341
    1859 3x15:A (1.6) BS02 HEC ? GO:0005506 ... O67504 25586341
    1860 3x15:D (1.6) BS01 HEC ? GO:0005506 ... O67504 25586341
    1861 3x15:D (1.6) BS02 HEC ? GO:0005506 ... O67504 25586341
    1862 3x15:G (1.6) BS01 HEC ? GO:0005506 ... O67504 25586341
    1863 3x15:G (1.6) BS02 HEC ? GO:0005506 ... O67504 25586341
    1864 3x15:J (1.6) BS01 HEC ? GO:0005506 ... O67504 25586341
    1865 3x15:J (1.6) BS02 HEC ? GO:0005506 ... O67504 25586341
    1866 3x39:A (1.5) BS01 HEC ? GO:0005506 ... P00099 25853415
    1867 3x39:B (1.5) BS01 HEC ? GO:0005506 ... P00099 25853415
    1868 3zbm:A (1.87) BS03 HEC 1.7.2.1 GO:0005507 ... B2UHR8 23535590
    1869 3zcf:A (1.65) BS01 HEC ? GO:0005515 ... P99999 24099549
    1870 3zcf:B (1.65) BS01 HEC ? GO:0005515 ... P99999 24099549
    1871 3zcf:C (1.65) BS01 HEC ? GO:0005515 ... P99999 24099549
    1872 3zcf:D (1.65) BS01 HEC ? GO:0005515 ... P99999 24099549
    1873 3ziy:A (1.01) BS03 HEC 1.7.2.1 GO:0005507 ... B2UHR8 23535590
    1874 3zoo:A (1.35) BS01 HEC ? GO:0005515 ... P99999 24099549
    1875 3zoo:B (1.35) BS01 HEC ? GO:0005515 ... P99999 24099549
    1876 3zoo:C (1.35) BS01 HEC ? GO:0005515 ... P99999 24099549
    1877 3zoo:D (1.35) BS01 HEC ? GO:0005515 ... P99999 24099549
    1878 3zow:A (2.35) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1879 3zow:B (2.35) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1880 3zow:C (2.35) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1881 3zow:D (2.35) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1882 3zow:E (2.35) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1883 3zow:F (2.35) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1884 3zow:G (2.35) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1885 3zow:H (2.35) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1886 3zow:I (2.35) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1887 3zow:J (2.35) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1888 3zow:K (2.35) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1889 3zow:L (2.35) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1890 3zow:M (2.35) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1891 3zow:N (2.35) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1892 3zow:O (2.35) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1893 3zow:P (2.35) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1894 3zow:Q (2.35) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1895 3zow:R (2.35) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1896 3zox:A (2.1) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1897 3zox:B (2.1) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1898 3zox:C (2.1) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1899 3zox:D (2.1) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1900 3zoy:A (2.3) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1901 3zoy:B (2.3) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1902 3zoy:C (2.3) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1903 3zoy:D (2.3) BS01 HEC 1.7.2.2 GO:0005506 ... P95339 23908017
    1904 3zqv:A (0.84) BS01 HEC ? GO:0005506 ... P00138 21900609
    1905 3zqy:A (1.03) BS01 HEC ? GO:0005506 ... P00138 21900609
    1906 3ztm:A (0.9) BS01 HEC ? GO:0005506 ... P00138 21900609
    1907 3ztz:A (1.05) BS01 HEC ? GO:0005506 ... P00138 21900609
    1908 3zwi:A (1.25) BS01 HEC ? GO:0005506 ... P00138 21900609
    1909 4aal:A (1.84) BS01 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    1910 4aal:A (1.84) BS02 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    1911 4aal:B (1.84) BS01 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    1912 4aal:B (1.84) BS02 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    1913 4aam:A (2.17) BS01 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    1914 4aam:A (2.17) BS02 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    1915 4aan:A (1.22) BS01 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    1916 4aan:A (1.22) BS02 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    1917 4aao:A (2.3) BS01 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    1918 4aao:A (2.3) BS02 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    1919 4aao:B (2.3) BS01 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    1920 4aao:B (2.3) BS02 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    1921 4ax3:A (1.6) BS03 HEC 1.7.2.1 GO:0005507 ... B2UHR8 23535590
    1922 4ax3:B (1.6) BS03 HEC 1.7.2.1 GO:0005507 ... B2UHR8 23535590
    1923 4ax3:C (1.6) BS03 HEC 1.7.2.1 GO:0005507 ... B2UHR8 23535590
    1924 4ax3:D (1.6) BS03 HEC 1.7.2.1 GO:0005507 ... B2UHR8 23535590
    1925 4b2n:A (1.8) BS01 HEC ? GO:0004130 ... Q7X0P3 23922395
    1926 4b2n:A (1.8) BS02 HEC ? GO:0004130 ... Q7X0P3 23922395
    1927 4b2n:B (1.8) BS01 HEC ? GO:0004130 ... Q7X0P3 23922395
    1928 4b2n:B (1.8) BS02 HEC ? GO:0004130 ... Q7X0P3 23922395
    1929 4cas:A (3.5) BS01 HEC ? GO:0005506 ... P07173 24352554
    1930 4cas:A (3.5) BS02 HEC ? GO:0005506 ... P07173 24352554
    1931 4cas:A (3.5) BS03 HEC ? GO:0005506 ... P07173 24352554
    1932 4cas:A (3.5) BS04 HEC ? GO:0005506 ... P07173 24352554
    1933 4cda:A (1.3) BS01 HEC ? GO:0005506 ... P00138 24816098
    1934 4cdv:A (1.17) BS01 HEC ? GO:0005506 ... P00138 24816098
    1935 4cdy:A (1.77) BS01 HEC ? GO:0005506 ... P00138 24816098
    1936 4cip:A (1.22) BS01 HEC ? GO:0005506 ... P00138 24816098
    1937 4cjg:A (1.26) BS01 HEC ? GO:0005506 ... P00138 24816098
    1938 4cjo:A (1.55) BS01 HEC ? GO:0005506 ... P00138 24816098
    1939 4cx9:A (1.43) BS01 HEC ? GO:0005506 ... Q07Z15 25792378
    1940 4cx9:B (1.43) BS01 HEC ? GO:0005506 ... Q07Z15 25792378
    1941 4d4n:A (1.45) BS01 HEC ? GO:0005506 ... P00138 26100643
    1942 4d4x:A (1.3) BS01 HEC ? GO:0005506 ... P00138 26100643
    1943 4d6t:D (3.57) BS01 HEC 7.1.1.8 GO:0009055 ... P00125 25564664
    1944 4d6t:Q (3.57) BS01 HEC 7.1.1.8 GO:0009055 ... P00125 25564664
    1945 4d6u:D (4.09) BS01 HEC 7.1.1.8 GO:0005739 ... P00125 25564664
    1946 4d6u:Q (4.09) BS01 HEC 7.1.1.8 GO:0005739 ... P00125 25564664
    1947 4eic:A (0.84) BS01 HEC ? GO:0005506 ... O30881 N/A
    1948 4eid:A (1.13) BS01 HEC ? GO:0005506 ... O30881 N/A
    1949 4eie:A (1.03) BS01 HEC ? GO:0005506 ... Q8KX15 N/A
    1950 4eif:A (1.04) BS01 HEC ? GO:0005506 ... Q8KX15 N/A
    1951 4fa1:A (2.18) BS02 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1952 4fa1:A (2.18) BS03 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1953 4fa1:B (2.18) BS02 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1954 4fa1:B (2.18) BS03 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1955 4fa4:A (2.14) BS02 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1956 4fa4:A (2.14) BS03 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1957 4fa4:B (2.14) BS02 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1958 4fa4:B (2.14) BS03 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1959 4fa5:A (1.94) BS02 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1960 4fa5:A (1.94) BS03 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1961 4fa5:B (1.94) BS02 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1962 4fa5:B (1.94) BS03 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1963 4fa9:A (2.09) BS02 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1964 4fa9:A (2.09) BS03 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1965 4fa9:B (2.09) BS02 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1966 4fa9:B (2.09) BS03 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1967 4fan:A (2.08) BS02 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1968 4fan:A (2.08) BS03 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1969 4fan:B (2.08) BS02 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1970 4fan:B (2.08) BS03 HEC 1.-.-.- GO:0004130 ... Q51658 23487750
    1971 4fas:A (2.1) BS01 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1972 4fas:A (2.1) BS02 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1973 4fas:A (2.1) BS03 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1974 4fas:A (2.1) BS04 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1975 4fas:A (2.1) BS05 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1976 4fas:A (2.1) BS06 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1977 4fas:A (2.1) BS07 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1978 4fas:A (2.1) BS09 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1979 4fas:A (2.1) BS10 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1980 4fas:A (2.1) BS12 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1981 4fas:B (2.1) BS01 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1982 4fas:B (2.1) BS03 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1983 4fas:B (2.1) BS04 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1984 4fas:B (2.1) BS05 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1985 4fas:B (2.1) BS06 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1986 4fas:B (2.1) BS07 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1987 4fas:B (2.1) BS08 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1988 4fas:B (2.1) BS09 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1989 4fas:B (2.1) BS11 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1990 4fas:B (2.1) BS12 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1991 4fas:C (2.1) BS01 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1992 4fas:C (2.1) BS02 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1993 4fas:C (2.1) BS03 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1994 4fas:C (2.1) BS06 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1995 4fas:C (2.1) BS07 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1996 4fas:C (2.1) BS08 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1997 4fas:C (2.1) BS09 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1998 4fas:C (2.1) BS10 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    1999 4fas:C (2.1) BS11 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    2000 4fas:C (2.1) BS12 HEC 1.7.2.6
    1.7.2.9    		 GO:0016491 ... Q50925 23952581
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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