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BioLiP
Download all results in tab-seperated text for 6165 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    5401 7lsa:A (1.76) BS04 GLC 3.2.1.41 GO:0004553 ... A0A2N0UU23 34186214
    5402 7lsk:D (2.7) BS01 GLC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003964 ... P03366 35218925
    5403 7lsr:A (2.42) BS02 GLC 3.2.1.41 GO:0004553 ... A0A2N0UU23 34186214
    5404 7lsr:A (2.42) BS03 GLC 3.2.1.41 GO:0004553 ... A0A2N0UU23 34186214
    5405 7lsr:A (2.42) BS04 GLC 3.2.1.41 GO:0004553 ... A0A2N0UU23 34186214
    5406 7lsr:A (2.42) BS05 GLC 3.2.1.41 GO:0004553 ... A0A2N0UU23 34186214
    5407 7lst:A (2.05) BS02 GLC 3.2.1.41 GO:0004553 ... A0A2N0UU23 34186214
    5408 7lsu:A (1.95) BS02 GLC 3.2.1.41 GO:0004553 ... A0A2N0UU23 34186214
    5409 7lta:A (1.53) BS01 GLC ? GO:0002317 ... P09382 N/A
    5410 7lta:A (1.53) BS02 GLC ? GO:0002317 ... P09382 N/A
    5411 7m74:M (3.93) BS01 GLC ? GO:0055085 ... P0AEX9 34437114
    5412 7m74:M (3.93) BS02 GLC ? GO:0055085 ... P0AEX9 34437114
    5413 7mk7:A (2.42815) BS01 GLC ? GO:0005515 ... P0AEX9
    Q6UXT8
    34819665
    5414 7mk7:A (2.42815) BS02 GLC ? GO:0005515 ... P0AEX9
    Q6UXT8
    34819665
    5415 7mk7:B (2.42815) BS01 GLC ? GO:0005515 ... P0AEX9
    Q6UXT8
    34819665
    5416 7mk7:B (2.42815) BS02 GLC ? GO:0005515 ... P0AEX9
    Q6UXT8
    34819665
    5417 7ml5:A (2.35) BS01 GLC 2.4.1.18 GO:0003824 ... Q01401 34762912
    5418 7ml5:A (2.35) BS02 GLC 2.4.1.18 GO:0003824 ... Q01401 34762912
    5419 7ml5:A (2.35) BS03 GLC 2.4.1.18 GO:0003824 ... Q01401 34762912
    5420 7ml5:A (2.35) BS04 GLC 2.4.1.18 GO:0003824 ... Q01401 34762912
    5421 7ml5:A (2.35) BS05 GLC 2.4.1.18 GO:0003824 ... Q01401 34762912
    5422 7ml5:A (2.35) BS06 GLC 2.4.1.18 GO:0003824 ... Q01401 34762912
    5423 7ml5:A (2.35) BS07 GLC 2.4.1.18 GO:0003824 ... Q01401 34762912
    5424 7ml5:A (2.35) BS08 GLC 2.4.1.18 GO:0003824 ... Q01401 34762912
    5425 7ml5:A (2.35) BS09 GLC 2.4.1.18 GO:0003824 ... Q01401 34762912
    5426 7ml5:A (2.35) BS10 GLC 2.4.1.18 GO:0003824 ... Q01401 34762912
    5427 7ml5:A (2.35) BS11 GLC 2.4.1.18 GO:0003824 ... Q01401 34762912
    5428 7ml5:A (2.35) BS12 GLC 2.4.1.18 GO:0003824 ... Q01401 34762912
    5429 7mq6:A (2.372) BS02 GLC ? GO:0005515 ... P0AEX9 34436761
    5430 7mq7:A (1.95) BS02 GLC ? GO:0005515 ... P0AEX9 34436761
    5431 7n04:L (1.70001) BS01 GLC N/A N/A N/A 35361878
    5432 7n57:A (1.83) BS01 GLC ? GO:0005515 ... P47929 N/A
    5433 7n57:B (1.83) BS01 GLC ? GO:0005515 ... P47929 N/A
    5434 7n8d:A (2.49) BS01 GLC ? GO:0005515 ... P47929 N/A
    5435 7n8d:B (2.49) BS01 GLC ? GO:0005515 ... P47929 N/A
    5436 7nyl:AAA (1.95) BS01 GLC 3.1.3.36 GO:0046328 ... Q9UQF2 35173330
    5437 7omt:A (2.0) BS01 GLC ? GO:0005515 ... P0AEX9 35383177
    5438 7omt:A (2.0) BS02 GLC ? GO:0005515 ... P0AEX9 35383177
    5439 7oz5:B (3.37) BS01 GLC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003964 ... P03366 34880240
    5440 7oz5:D (3.37) BS01 GLC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003964 ... P03366 34880240
    5441 7p01:A (2.12) BS01 GLC N/A GO:0005975 ... N/A 34682239
    5442 7p01:A (2.12) BS02 GLC N/A GO:0005975 ... N/A 34682239
    5443 7p01:A (2.12) BS04 GLC N/A GO:0005975 ... N/A 34682239
    5444 7p01:A (2.12) BS05 GLC N/A GO:0005975 ... N/A 34682239
    5445 7p01:B (2.12) BS01 GLC N/A GO:0005975 ... N/A 34682239
    5446 7p07:A (2.13) BS01 GLC N/A GO:0005975 ... N/A 34682239
    5447 7p07:B (2.13) BS01 GLC N/A GO:0005975 ... N/A 34682239
    5448 7p0f:A (1.85) BS01 GLC ? GO:0004930 ... O60894
    P0AEX9
    Q16602
    35245037
    5449 7p0f:A (1.85) BS02 GLC ? GO:0004930 ... O60894
    P0AEX9
    Q16602
    35245037
    5450 7p0i:A (2.3) BS01 GLC ? GO:0004930 ... O60894
    P0AEX9
    Q16602
    35245037
    5451 7p0i:A (2.3) BS02 GLC ? GO:0004930 ... O60894
    P0AEX9
    Q16602
    35245037
    5452 7p43:A (1.93) BS01 GLC 2.4.1.18 GO:0003824 ... Q6FJV0 34939121
    5453 7p43:A (1.93) BS02 GLC 2.4.1.18 GO:0003824 ... Q6FJV0 34939121
    5454 7p43:B (1.93) BS01 GLC 2.4.1.18 GO:0003824 ... Q6FJV0 34939121
    5455 7p59:A (1.27) BS04 GLC ? N/A B3GVK1 36943866
    5456 7p59:A (1.27) BS05 GLC ? N/A B3GVK1 36943866
    5457 7p5a:A (1.95) BS04 GLC ? N/A B3GVK1 36943866
    5458 7p5b:A (1.13) BS04 GLC ? N/A B3GVK1 36943866
    5459 7p6h:B (1.73) BS01 GLC 3.2.1.4 GO:0000272 ... C1JI15 35234142
    5460 7p6j:A (1.75) BS01 GLC 3.2.1.4 GO:0000272 ... C1JI15 35234142
    5461 7p6j:B (1.75) BS03 GLC 3.2.1.4 GO:0000272 ... C1JI15 35234142
    5462 7p6j:D (1.75) BS03 GLC 3.2.1.4 GO:0000272 ... C1JI15 35234142
    5463 7q13:A (3.0) BS03 GLC 2.4.1.11 GO:0004373 ... P13807 35835870
    5464 7q13:B (3.0) BS03 GLC 2.4.1.11 GO:0004373 ... P13807 35835870
    5465 7q13:C (3.0) BS04 GLC 2.4.1.11 GO:0004373 ... P13807 35835870
    5466 7q13:D (3.0) BS04 GLC 2.4.1.11 GO:0004373 ... P13807 35835870
    5467 7qf7:A (1.47) BS01 GLC ? N/A Q9UQK1 36261419
    5468 7qf7:A (1.47) BS02 GLC ? N/A Q9UQK1 36261419
    5469 7qfa:A (2.0) BS01 GLC ? N/A Q9UQK1 36261419
    5470 7qfa:A (2.0) BS02 GLC ? N/A Q9UQK1 36261419
    5471 7qfa:B (2.0) BS01 GLC ? N/A Q9UQK1 36261419
    5472 7qfa:B (2.0) BS02 GLC ? N/A Q9UQK1 36261419
    5473 7qfa:C (2.0) BS01 GLC ? N/A Q9UQK1 36261419
    5474 7qfa:C (2.0) BS02 GLC ? N/A Q9UQK1 36261419
    5475 7qfd:A (2.35) BS02 GLC ? GO:0000166 ... A0A024H8G7 37963862
    5476 7qm2:B (2.685) BS01 GLC ? N/A Q9UQK1 36261419
    5477 7qm2:B (2.685) BS02 GLC ? N/A Q9UQK1 36261419
    5478 7qm2:B (2.685) BS03 GLC ? N/A Q9UQK1 36261419
    5479 7qpd:C (3.73) BS02 GLC ? GO:0000122 ... P27797 35948544
    5480 7r29:A (1.28) BS01 GLC 3.2.1.4 GO:0000272 ... Q8TG26 N/A
    5481 7r29:B (1.28) BS01 GLC 3.2.1.4 GO:0000272 ... Q8TG26 N/A
    5482 7r55:A (1.84) BS01 GLC ? N/A F2UID9 36097056
    5483 7r55:A (1.84) BS04 GLC ? N/A F2UID9 36097056
    5484 7r55:B (1.84) BS01 GLC ? N/A F2UID9 36097056
    5485 7r55:B (1.84) BS03 GLC ? N/A F2UID9 36097056
    5486 7rdg:A (3.0) BS01 GLC ? GO:0005515 ... P47929 N/A
    5487 7rdg:B (3.0) BS01 GLC ? GO:0005515 ... P47929 N/A
    5488 7rdg:C (3.0) BS01 GLC ? GO:0005515 ... P47929 N/A
    5489 7rdg:D (3.0) BS01 GLC ? GO:0005515 ... P47929 N/A
    5490 7rft:A (1.53) BS01 GLC ? N/A A0A2N0URA4 35378131
    5491 7rft:A (1.53) BS02 GLC ? N/A A0A2N0URA4 35378131
    5492 7rft:A (1.53) BS03 GLC ? N/A A0A2N0URA4 35378131
    5493 7rft:B (1.53) BS01 GLC ? N/A A0A2N0URA4 35378131
    5494 7rft:B (1.53) BS02 GLC ? N/A A0A2N0URA4 35378131
    5495 7rft:B (1.53) BS03 GLC ? N/A A0A2N0URA4 35378131
    5496 7rpy:A (1.67) BS01 GLC ? N/A A0A412DXQ2 35378131
    5497 7rpy:A (1.67) BS02 GLC ? N/A A0A412DXQ2 35378131
    5498 7rpy:A (1.67) BS03 GLC ? N/A A0A412DXQ2 35378131
    5499 7rxc:B (3.2) BS01 GLC ? GO:0005618 ... P06654
    P99134
    34620716
    5500 7rxc:B (3.2) BS02 GLC ? GO:0005618 ... P06654
    P99134
    34620716
    5501 7rxd:B (3.6) BS01 GLC ? GO:0005618 ... P06654
    P99134
    34620716
    5502 7rxd:B (3.6) BS02 GLC ? GO:0005618 ... P06654
    P99134
    34620716
    5503 7s0z:A (2.34) BS04 GLC 2.4.1.-
    3.4.22.-
    GO:0016757 ... Q9EXR0 34678063
    5504 7s0z:B (2.34) BS03 GLC 2.4.1.-
    3.4.22.-
    GO:0016757 ... Q9EXR0 34678063
    5505 7s7f:A (1.88) BS02 GLC ? N/A P01889 37353482
    5506 7spt:A (2.1) BS01 GLC ? GO:0005353 ... P11169 35552392
    5507 7t78:A (2.4) BS01 GLC 2.7.1.1 GO:0001678 ... P35557 35179904
    5508 7t78:B (2.4) BS01 GLC 2.7.1.1 GO:0001678 ... P35557 35179904
    5509 7t79:A (2.4) BS02 GLC 2.7.1.1 GO:0001678 ... P35557 35179904
    5510 7t79:B (2.4) BS02 GLC 2.7.1.1 GO:0001678 ... P35557 35179904
    5511 7tkz:A (1.83) BS01 GLC ? GO:0005515 ... P47929 N/A
    5512 7tkz:B (1.83) BS01 GLC ? GO:0005515 ... P47929 N/A
    5513 7u1y:A (1.81) BS01 GLC 3.1.3.- GO:0004427 ... Q9UT55 35314193
    5514 7u3d:A (2.4) BS01 GLC ? GO:0000166 ... A0A5P2ALW6 36192422
    5515 7u3d:A (2.4) BS02 GLC ? GO:0000166 ... A0A5P2ALW6 36192422
    5516 7u3d:B (2.4) BS01 GLC ? GO:0000166 ... A0A5P2ALW6 36192422
    5517 7u3d:B (2.4) BS02 GLC ? GO:0000166 ... A0A5P2ALW6 36192422
    5518 7u3d:C (2.4) BS01 GLC ? GO:0000166 ... A0A5P2ALW6 36192422
    5519 7u3d:C (2.4) BS02 GLC ? GO:0000166 ... A0A5P2ALW6 36192422
    5520 7u3d:F (2.4) BS01 GLC ? GO:0000166 ... A0A5P2ALW6 36192422
    5521 7u3d:F (2.4) BS02 GLC ? GO:0000166 ... A0A5P2ALW6 36192422
    5522 7uaj:A (3.25) BS01 GLC ? GO:0003677 ... P03126
    P0AEX9
    N/A
    5523 7uaj:A (3.25) BS02 GLC ? GO:0003677 ... P03126
    P0AEX9
    N/A
    5524 7uaj:B (3.25) BS01 GLC ? GO:0003677 ... P03126
    P0AEX9
    N/A
    5525 7uaj:B (3.25) BS02 GLC ? GO:0003677 ... P03126
    P0AEX9
    N/A
    5526 7uaj:C (3.25) BS01 GLC ? GO:0003677 ... P03126
    P0AEX9
    N/A
    5527 7uaj:C (3.25) BS02 GLC ? GO:0003677 ... P03126
    P0AEX9
    N/A
    5528 7uaj:D (3.25) BS01 GLC ? GO:0003677 ... P03126
    P0AEX9
    N/A
    5529 7uaj:D (3.25) BS02 GLC ? GO:0003677 ... P03126
    P0AEX9
    N/A
    5530 7uwv:A (1.7) BS01 GLC ? N/A A0A2N0UYM2 38177679
    5531 7uwv:A (1.7) BS02 GLC ? N/A A0A2N0UYM2 38177679
    5532 7uwv:A (1.7) BS03 GLC ? N/A A0A2N0UYM2 38177679
    5533 7uwv:A (1.7) BS04 GLC ? N/A A0A2N0UYM2 38177679
    5534 7uwv:A (1.7) BS05 GLC ? N/A A0A2N0UYM2 38177679
    5535 7uwv:A (1.7) BS06 GLC ? N/A A0A2N0UYM2 38177679
    5536 7uwv:A (1.7) BS07 GLC ? N/A A0A2N0UYM2 38177679
    5537 7uwv:A (1.7) BS08 GLC ? N/A A0A2N0UYM2 38177679
    5538 7uww:A (1.61) BS01 GLC ? GO:0030245 ... A0A2N0UYM2 38177679
    5539 7uww:A (1.61) BS02 GLC ? GO:0030245 ... A0A2N0UYM2 38177679
    5540 7uww:A (1.61) BS03 GLC ? GO:0030245 ... A0A2N0UYM2 38177679
    5541 7uww:B (1.61) BS01 GLC ? GO:0030245 ... A0A2N0UYM2 38177679
    5542 7uww:B (1.61) BS02 GLC ? GO:0030245 ... A0A2N0UYM2 38177679
    5543 7vky:B (2.0) BS01 GLC ? GO:0004553 ... I0AIT9 35065074
    5544 7vn2:A (2.42) BS02 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5545 7vn2:A (2.42) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5546 7vn2:C (2.42) BS02 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5547 7vn2:C (2.42) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5548 7vn3:A (1.94) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5549 7vn3:A (1.94) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5550 7vn3:B (1.94) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5551 7vn3:B (1.94) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5552 7vn3:C (1.94) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5553 7vn3:C (1.94) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5554 7vn3:D (1.94) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5555 7vn3:D (1.94) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5556 7vn4:A (2.1) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5557 7vn4:A (2.1) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5558 7vn4:B (2.1) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5559 7vn4:B (2.1) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5560 7vn4:C (2.1) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5561 7vn4:C (2.1) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5562 7vn4:D (2.1) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5563 7vn4:D (2.1) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5564 7vn5:A (1.95) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5565 7vn5:A (1.95) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5566 7vn5:B (1.95) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5567 7vn5:B (1.95) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5568 7vn5:C (1.95) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5569 7vn5:C (1.95) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5570 7vn5:D (1.95) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5571 7vn5:D (1.95) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5572 7vn6:A (2.79) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5573 7vn6:A (2.79) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5574 7vn6:B (2.79) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5575 7vn6:B (2.79) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5576 7vn6:C (2.79) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5577 7vn6:C (2.79) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5578 7vn6:D (2.79) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5579 7vn6:D (2.79) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5580 7vn7:A (2.11) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5581 7vn7:A (2.11) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5582 7vn7:B (2.11) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5583 7vn7:B (2.11) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5584 7vn7:C (2.11) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5585 7vn7:C (2.11) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5586 7vn7:D (2.11) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5587 7vn7:D (2.11) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5588 7vn8:A (2.04) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5589 7vn8:A (2.04) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5590 7vn8:B (2.04) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5591 7vn8:B (2.04) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5592 7vn8:C (2.04) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5593 7vn8:C (2.04) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5594 7vn8:D (2.04) BS03 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5595 7vn8:D (2.04) BS04 GLC ? GO:0005515 ... P0AEX9
    Q8S307
    36522451
    5596 7w11:A (2.45) BS02 GLC 2.4.1.- GO:0000166 ... A0A385Z7H9 N/A
    5597 7w2w:A (1.79) BS01 GLC 3.2.1.45 GO:0004348 ... F6BL85 N/A
    5598 7wda:A (1.91) BS01 GLC ? GO:0005886 ... P9WGU9 35775983
    5599 7wda:A (1.91) BS02 GLC ? GO:0005886 ... P9WGU9 35775983
    5600 7wda:B (1.91) BS01 GLC ? GO:0005886 ... P9WGU9 35775983

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218