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BioLiP
Download all results in tab-seperated text for 79 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7xka:A (3.1) BS01 G1I 3.2.1.17 GO:0003796 ... P00720
    P07550    		 37059717
    2 8gdz:R (3.5) BS01 G1I ? GO:0004930 ... P07550 38480881
    3 8ge1:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    4 8ge2:R (3.3) BS01 G1I ? GO:0004930 ... P07550 38480881
    5 8ge3:R (3.3) BS01 G1I ? GO:0004930 ... P07550 38480881
    6 8ge4:R (3.3) BS01 G1I ? GO:0004930 ... P07550 38480881
    7 8ge5:R (3.2) BS01 G1I ? GO:0004930 ... P07550 38480881
    8 8ge6:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    9 8ge7:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    10 8ge8:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    11 8ge9:R (3.5) BS01 G1I ? GO:0004930 ... P07550 38480881
    12 8gea:R (3.5) BS01 G1I ? GO:0004930 ... P07550 38480881
    13 8geb:R (3.6) BS01 G1I ? GO:0004930 ... P07550 38480881
    14 8gec:R (3.5) BS01 G1I ? GO:0004930 ... P07550 38480881
    15 8ged:R (3.5) BS01 G1I ? GO:0004930 ... P07550 38480881
    16 8gee:R (3.7) BS01 G1I ? GO:0004930 ... P07550 38480881
    17 8gef:R (3.8) BS01 G1I ? GO:0004930 ... P07550 38480881
    18 8geg:R (3.8) BS01 G1I ? GO:0004930 ... P07550 38480881
    19 8geh:R (4.0) BS01 G1I ? GO:0004930 ... P07550 38480881
    20 8gei:R (4.1) BS01 G1I ? GO:0004930 ... P07550 38480881
    21 8gfv:R (3.1) BS01 G1I ? GO:0004930 ... P07550 38480881
    22 8gfw:R (3.0) BS01 G1I ? GO:0004930 ... P07550 38480881
    23 8gfx:R (3.0) BS01 G1I ? GO:0004930 ... P07550 38480881
    24 8gfy:R (3.0) BS01 G1I ? GO:0004930 ... P07550 38480881
    25 8gfz:R (3.0) BS01 G1I ? GO:0004930 ... P07550 38480881
    26 8gg0:R (2.9) BS01 G1I ? GO:0004930 ... P07550 38480881
    27 8gg1:R (3.0) BS01 G1I ? GO:0004930 ... P07550 38480881
    28 8gg2:R (3.0) BS01 G1I ? GO:0004930 ... P07550 38480881
    29 8gg3:R (3.1) BS01 G1I ? GO:0004930 ... P07550 38480881
    30 8gg4:R (3.2) BS01 G1I ? GO:0004930 ... P07550 38480881
    31 8gg5:R (3.2) BS01 G1I ? GO:0004930 ... P07550 38480881
    32 8gg6:R (3.3) BS01 G1I ? GO:0004930 ... P07550 38480881
    33 8gg7:R (3.3) BS01 G1I ? GO:0004930 ... P07550 38480881
    34 8gg8:R (3.3) BS01 G1I ? GO:0004930 ... P07550 38480881
    35 8gg9:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    36 8gga:R (3.5) BS01 G1I ? GO:0004930 ... P07550 38480881
    37 8ggb:R (3.5) BS01 G1I ? GO:0004930 ... P07550 38480881
    38 8ggc:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    39 8gge:R (3.5) BS01 G1I ? GO:0004930 ... P07550 38480881
    40 8ggf:R (3.6) BS01 G1I ? GO:0004930 ... P07550 38480881
    41 8ggi:R (3.5) BS01 G1I ? GO:0004930 ... P07550 38480881
    42 8ggj:R (3.5) BS01 G1I ? GO:0004930 ... P07550 38480881
    43 8ggk:R (3.3) BS01 G1I ? GO:0004930 ... P07550 38480881
    44 8ggl:R (3.2) BS01 G1I ? GO:0004930 ... P07550 38480881
    45 8ggm:R (3.2) BS01 G1I ? GO:0004930 ... P07550 38480881
    46 8ggn:R (3.3) BS01 G1I ? GO:0004930 ... P07550 38480881
    47 8ggo:R (3.2) BS01 G1I ? GO:0004930 ... P07550 38480881
    48 8ggp:R (3.2) BS01 G1I ? GO:0004930 ... P07550 38480881
    49 8ggq:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    50 8ggr:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    51 8ggs:R (3.5) BS01 G1I ? GO:0004930 ... P07550 38480881
    52 8ggt:R (3.5) BS01 G1I ? GO:0004930 ... P07550 38480881
    53 8ggu:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    54 8ggv:R (3.5) BS01 G1I ? GO:0004930 ... P07550 38480881
    55 8ggw:R (3.6) BS01 G1I ? GO:0004930 ... P07550 38480881
    56 8ggx:R (3.6) BS01 G1I ? GO:0004930 ... P07550 38480881
    57 8ggy:R (3.9) BS01 G1I ? GO:0004930 ... P07550 38480881
    58 8ggz:R (3.9) BS01 G1I ? GO:0004930 ... P07550 38480881
    59 8gh0:R (4.0) BS01 G1I ? GO:0004930 ... P07550 38480881
    60 8gh1:R (4.1) BS01 G1I ? GO:0004930 ... P07550 38480881
    61 8unl:R (3.3) BS01 G1I ? GO:0004930 ... P07550 38480881
    62 8unm:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    63 8unn:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    64 8uno:R (3.3) BS01 G1I ? GO:0004930 ... P07550 38480881
    65 8unp:R (3.3) BS01 G1I ? GO:0004930 ... P07550 38480881
    66 8unq:R (3.3) BS01 G1I ? GO:0004930 ... P07550 38480881
    67 8unr:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    68 8uns:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    69 8unt:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    70 8unu:R (3.5) BS01 G1I ? GO:0004930 ... P07550 38480881
    71 8unv:R (3.3) BS01 G1I ? GO:0004930 ... P07550 38480881
    72 8unw:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    73 8unx:R (3.6) BS01 G1I ? GO:0004930 ... P07550 38480881
    74 8uny:R (3.6) BS01 G1I ? GO:0004930 ... P07550 38480881
    75 8unz:R (3.8) BS01 G1I ? GO:0004930 ... P07550 38480881
    76 8uo0:R (3.5) BS01 G1I ? GO:0004930 ... P07550 38480881
    77 8uo1:R (3.6) BS01 G1I ? GO:0001540 ... P07550 38480881
    78 8uo2:R (3.6) BS01 G1I ? GO:0004930 ... P07550 38480881
    79 8uo3:R (3.5) BS01 G1I ? GO:0004930 ... P07550 38480881
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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