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BioLiP
Download all results in tab-seperated text for 19 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 1qxd:A (2.25) BS02 FU2 ? GO:0004601 ... P69905 15341482
    2 1qxd:C (2.25) BS02 FU2 ? GO:0004601 ... P69905 15341482
    3 3s2f:E (2.0) BS04 FU2 1.1.1.1 GO:0000166 ... Q46UZ9 N/A
    4 3s2f:F (2.0) BS04 FU2 1.1.1.1 GO:0000166 ... Q46UZ9 N/A
    5 3s2f:G (2.0) BS04 FU2 1.1.1.1 GO:0000166 ... Q46UZ9 N/A
    6 3s2f:H (2.0) BS01 FU2 1.1.1.1 GO:0000166 ... Q46UZ9 N/A
    7 3s2g:A (2.3) BS03 FU2 1.1.1.1 GO:0000166 ... Q46UZ9 N/A
    8 3s2g:B (2.3) BS03 FU2 1.1.1.1 GO:0000166 ... Q46UZ9 N/A
    9 3s2g:C (2.3) BS03 FU2 1.1.1.1 GO:0000166 ... Q46UZ9 N/A
    10 3s2g:D (2.3) BS03 FU2 1.1.1.1 GO:0000166 ... Q46UZ9 N/A
    11 3s2g:E (2.3) BS04 FU2 1.1.1.1 GO:0000166 ... Q46UZ9 N/A
    12 3s2g:F (2.3) BS04 FU2 1.1.1.1 GO:0000166 ... Q46UZ9 N/A
    13 3s2g:G (2.3) BS04 FU2 1.1.1.1 GO:0000166 ... Q46UZ9 N/A
    14 3s2i:A (2.0) BS03 FU2 1.1.1.1 GO:0000166 ... Q46UZ9 N/A
    15 3s2i:B (2.0) BS03 FU2 1.1.1.1 GO:0000166 ... Q46UZ9 N/A
    16 3s2i:C (2.0) BS03 FU2 1.1.1.1 GO:0000166 ... Q46UZ9 N/A
    17 3s2i:D (2.0) BS03 FU2 1.1.1.1 GO:0000166 ... Q46UZ9 N/A
    18 3s2i:E (2.0) BS03 FU2 1.1.1.1 GO:0000166 ... Q46UZ9 N/A
    19 3s2i:F (2.0) BS03 FU2 1.1.1.1 GO:0000166 ... Q46UZ9 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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