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BioLiP
Download all results in tab-seperated text for 7576 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    5601 7cpc:E (2.801) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    5602 7cpc:F (2.801) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    5603 7cpi:A (2.602) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    5604 7cpi:A (2.602) BS02 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    5605 7cpi:B (2.602) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    5606 7cpi:B (2.602) BS02 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    5607 7cpi:C (2.602) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    5608 7cpi:C (2.602) BS02 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    5609 7cpi:D (2.602) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    5610 7cpi:D (2.602) BS02 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    5611 7cpi:E (2.602) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    5612 7cpi:E (2.602) BS02 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    5613 7cpi:F (2.602) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    5614 7cpi:F (2.602) BS02 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    5615 7cup:A (2.0) BS01 FE 1.13.11.9 GO:0009056 ... Q88FY1 N/A
    5616 7cup:B (2.0) BS01 FE 1.13.11.9 GO:0009056 ... Q88FY1 N/A
    5617 7cup:C (2.0) BS01 FE 1.13.11.9 GO:0009056 ... Q88FY1 N/A
    5618 7cup:D (2.0) BS01 FE 1.13.11.9 GO:0009056 ... Q88FY1 N/A
    5619 7cup:E (2.0) BS01 FE 1.13.11.9 GO:0009056 ... Q88FY1 N/A
    5620 7cup:F (2.0) BS01 FE 1.13.11.9 GO:0009056 ... Q88FY1 N/A
    5621 7cxz:A (1.561) BS01 FE 1.13.11.20 GO:0016702 ... Q8LGJ5 33207269
    5622 7cy4:A (2.2) BS01 FE 1.14.99.- GO:0005506 ... A0A2K3D5Z7
    P0AEX9
    33531488
    5623 7cy5:A (2.2) BS01 FE 1.14.99.- GO:0005506 ... A0A2K3D5Z7
    P0AEX9
    33531488
    5624 7d2i:A (1.85) BS01 FE 2.3.2.5 GO:0005576 ... B7QK46 33774034
    5625 7ddq:L (2.84) BS10 FE ? GO:0009772 ... A0A2T4JIS6 34134992
    5626 7ddq:M (2.84) BS06 FE ? GO:0009772 ... A0A2T4JIN0 34134992
    5627 7de0:A (2.4) BS01 FE 1.14.11.38 GO:0005575 ... Q4WAW9 N/A
    5628 7de0:B (2.4) BS01 FE 1.14.11.38 GO:0005575 ... Q4WAW9 N/A
    5629 7de0:C (2.4) BS01 FE 1.14.11.38 GO:0005575 ... Q4WAW9 N/A
    5630 7de0:D (2.4) BS01 FE 1.14.11.38 GO:0005575 ... Q4WAW9 N/A
    5631 7de2:A (1.9) BS03 FE 1.14.11.- GO:0016114 ... A0A2I1BSX0 34285212
    5632 7de2:B (1.9) BS02 FE 1.14.11.- GO:0016114 ... A0A2I1BSX0 34285212
    5633 7die:A (1.9) BS01 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5634 7die:A (1.9) BS02 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5635 7die:A (1.9) BS03 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5636 7die:B (1.9) BS01 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5637 7die:B (1.9) BS02 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5638 7die:B (1.9) BS03 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5639 7die:C (1.9) BS01 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5640 7die:C (1.9) BS02 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5641 7die:C (1.9) BS03 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5642 7die:C (1.9) BS04 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5643 7die:D (1.9) BS01 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5644 7die:D (1.9) BS02 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5645 7die:D (1.9) BS03 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5646 7die:E (1.9) BS01 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5647 7die:E (1.9) BS02 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5648 7die:E (1.9) BS03 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5649 7die:E (1.9) BS04 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5650 7die:F (1.9) BS01 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5651 7die:F (1.9) BS02 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5652 7die:F (1.9) BS03 FE 1.16.3.2 GO:0008199 ... Q8EWB1 33852289
    5653 7dio:A (1.899) BS01 FE 1.8.4.2 GO:0015038 ... Q9NLB2 N/A
    5654 7dl5:A (2.3) BS01 FE 1.16.3.2 GO:0004322 ... Q9X0L2 35120932
    5655 7dl5:H (2.3) BS01 FE 1.16.3.2 GO:0004322 ... Q9X0L2 35120932
    5656 7dlb:A (2.502) BS01 FE 1.16.3.1 GO:0004322 ... Q70MM3 N/A
    5657 7dlb:B (2.502) BS01 FE 1.16.3.1 GO:0004322 ... Q70MM3 N/A
    5658 7dqo:A (1.701) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 N/A
    5659 7dqo:B (1.701) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 N/A
    5660 7dqo:C (1.701) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 N/A
    5661 7dqo:D (1.701) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 N/A
    5662 7dqo:E (1.701) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 N/A
    5663 7dqo:F (1.701) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 N/A
    5664 7dqo:G (1.701) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 N/A
    5665 7dqo:H (1.701) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 N/A
    5666 7dqo:I (1.701) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 N/A
    5667 7dqo:J (1.701) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 N/A
    5668 7dqo:K (1.701) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 N/A
    5669 7dqo:L (1.701) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 N/A
    5670 7dt0:A (2.43) BS02 FE ? GO:0046872 ... S5TUM1 N/A
    5671 7dt0:B (2.43) BS03 FE ? GO:0046872 ... S5TUM1 N/A
    5672 7dt0:C (2.43) BS02 FE ? GO:0046872 ... S5TUM1 N/A
    5673 7dt0:D (2.43) BS02 FE ? GO:0046872 ... S5TUM1 N/A
    5674 7dt0:E (2.43) BS02 FE ? GO:0046872 ... S5TUM1 N/A
    5675 7dt0:F (2.43) BS02 FE ? GO:0046872 ... S5TUM1 N/A
    5676 7dt0:G (2.43) BS02 FE ? GO:0046872 ... S5TUM1 N/A
    5677 7dt0:H (2.43) BS02 FE ? GO:0046872 ... S5TUM1 N/A
    5678 7dy8:A (2.103) BS01 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5679 7dy8:A (2.103) BS02 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5680 7dy8:H (2.103) BS01 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5681 7dy8:H (2.103) BS02 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5682 7dya:A (2.197) BS01 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5683 7dya:A (2.197) BS02 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5684 7dya:B (2.197) BS01 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5685 7dya:B (2.197) BS02 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5686 7dya:C (2.197) BS01 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5687 7dya:C (2.197) BS02 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5688 7dya:D (2.197) BS01 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5689 7dya:D (2.197) BS02 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5690 7dya:E (2.197) BS01 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5691 7dya:E (2.197) BS02 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5692 7dya:F (2.197) BS01 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5693 7dya:F (2.197) BS02 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5694 7dya:G (2.197) BS01 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5695 7dya:G (2.197) BS02 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5696 7dya:H (2.197) BS01 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5697 7dya:H (2.197) BS02 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5698 7dyb:A (1.779) BS01 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5699 7dyb:A (1.779) BS02 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5700 7dyb:B (1.779) BS01 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5701 7dyb:B (1.779) BS02 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5702 7dyb:H (1.779) BS01 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5703 7dyb:H (1.779) BS02 FE 1.16.3.2 GO:0004322 ... Q9X0L2 34381032
    5704 7dyg:A (2.0) BS02 FE 1.14.11.66 N/A Q6B0I6 N/A
    5705 7dyq:A (1.998) BS02 FE 1.14.11.66 N/A Q6B0I6 N/A
    5706 7dz9:A (2.2) BS02 FE ? GO:0046872 ... E3BK14 35110668
    5707 7dz9:A (2.2) BS03 FE ? GO:0046872 ... E3BK14 35110668
    5708 7dz9:A (2.2) BS04 FE ? GO:0046872 ... E3BK14 35110668
    5709 7dz9:B (2.2) BS02 FE ? GO:0046872 ... E3BK14 35110668
    5710 7dz9:B (2.2) BS03 FE ? GO:0046872 ... E3BK14 35110668
    5711 7dz9:B (2.2) BS04 FE ? GO:0046872 ... E3BK14 35110668
    5712 7e06:A (1.97) BS02 FE ? GO:0046872 ... S5TUM1 N/A
    5713 7e06:B (1.97) BS02 FE ? GO:0046872 ... S5TUM1 N/A
    5714 7e07:A (2.14) BS03 FE ? GO:0046872 ... S5TUM1 N/A
    5715 7e07:B (2.14) BS01 FE ? GO:0046872 ... S5TUM1 N/A
    5716 7e0l:A (2.82) BS03 FE 1.7.99.1 GO:0003824 ... D9PYV4 N/A
    5717 7e0l:B (2.82) BS03 FE 1.7.99.1 GO:0003824 ... D9PYV4 N/A
    5718 7e0l:K (2.82) BS03 FE 1.7.99.1 GO:0003824 ... D9PYV4 N/A
    5719 7e0l:M (2.82) BS03 FE 1.7.99.1 GO:0003824 ... D9PYV4 N/A
    5720 7e37:A (2.09) BS01 FE 1.14.20.8 GO:0009611 ... A0A0N9HQ36 34969844
    5721 7e37:B (2.09) BS01 FE 1.14.20.8 GO:0009611 ... A0A0N9HQ36 34969844
    5722 7e38:A (2.05) BS01 FE 1.14.20.8 GO:0009611 ... A0A0N9HQ36 34969844
    5723 7e38:B (2.05) BS01 FE 1.14.20.8 GO:0009611 ... A0A0N9HQ36 34969844
    5724 7eeh:A (2.0) BS01 FE ? GO:0051213 ... Q8X0D9 33973699
    5725 7eeh:B (2.0) BS01 FE ? GO:0051213 ... Q8X0D9 33973699
    5726 7eeh:C (2.0) BS01 FE ? GO:0051213 ... Q8X0D9 33973699
    5727 7eeh:D (2.0) BS01 FE ? GO:0051213 ... Q8X0D9 33973699
    5728 7ek4:A (2.3) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 34360624
    5729 7ek4:B (2.3) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 34360624
    5730 7ek4:C (2.3) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 34360624
    5731 7ek4:D (2.3) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 34360624
    5732 7ek4:E (2.3) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 34360624
    5733 7ek4:F (2.3) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 34360624
    5734 7ek5:A (3.0) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 34360624
    5735 7ek5:B (3.0) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 34360624
    5736 7ek5:C (3.0) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 34360624
    5737 7ek5:D (3.0) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 34360624
    5738 7emk:A (2.3) BS01 FE N/A GO:0006826 ... N/A 32792196
    5739 7emk:A (2.3) BS02 FE N/A GO:0006826 ... N/A 32792196
    5740 7emk:A (2.3) BS03 FE N/A GO:0006826 ... N/A 32792196
    5741 7emk:A (2.3) BS04 FE N/A GO:0006826 ... N/A 32792196
    5742 7emk:A (2.3) BS05 FE N/A GO:0006826 ... N/A 32792196
    5743 7emz:A (2.3) BS02 FE 1.14.11.- GO:0016114 ... A0A2I1BSX0 34285212
    5744 7emz:B (2.3) BS01 FE 1.14.11.- GO:0016114 ... A0A2I1BSX0 34285212
    5745 7enb:A (2.3) BS02 FE 1.14.11.- GO:0016114 ... A0A2I1BSX0 34285212
    5746 7enb:B (2.3) BS01 FE 1.14.11.- GO:0016114 ... A0A2I1BSX0 34285212
    5747 7enu:A (2.322) BS01 FE 3.4.21.- GO:0005576 ... P24627 N/A
    5748 7enu:B (2.322) BS01 FE 3.4.21.- GO:0005576 ... P24627 N/A
    5749 7eqd:L (2.76) BS06 FE ? GO:0009772 ... P10717 34323477
    5750 7eqd:M (2.76) BS03 FE ? GO:0009772 ... Q2RQ26 34323477
    5751 7eqk:A (2.04001) BS01 FE ? GO:0046872 ... L7PIL3 N/A
    5752 7eqk:B (2.04001) BS01 FE ? GO:0046872 ... L7PIL3 N/A
    5753 7equ:A (2.743) BS01 FE 3.4.21.- GO:0005576 ... P24627 N/A
    5754 7equ:B (2.743) BS01 FE 3.4.21.- GO:0005576 ... P24627 N/A
    5755 7eu6:A (2.05011) BS01 FE ? GO:0046872 ... L7PIL3 N/A
    5756 7eu6:B (2.05011) BS01 FE ? GO:0046872 ... L7PIL3 N/A
    5757 7eue:A (2.08757) BS01 FE ? GO:0046872 ... L7PIL3 N/A
    5758 7eue:B (2.08757) BS01 FE ? GO:0046872 ... L7PIL3 N/A
    5759 7eup:A (2.11043) BS01 FE ? GO:0046872 ... L7PIL3 N/A
    5760 7eup:B (2.11043) BS01 FE ? GO:0046872 ... L7PIL3 N/A
    5761 7euz:A (1.91028) BS01 FE ? GO:0046872 ... L7PIL3 N/A
    5762 7euz:B (1.91028) BS01 FE ? GO:0046872 ... L7PIL3 N/A
    5763 7ev0:A (2.7) BS01 FE 3.4.21.- GO:0005576 ... P24627 N/A
    5764 7ev0:P (2.7) BS01 FE 3.4.21.- GO:0005576 ... P24627 N/A
    5765 7evq:A (2.6) BS01 FE 3.4.21.- GO:0005576 ... P24627 N/A
    5766 7evq:B (2.6) BS01 FE 3.4.21.- GO:0005576 ... P24627 N/A
    5767 7f0l:L (2.94) BS08 FE ? GO:0009772 ... Q3J1A5 34728609
    5768 7f0l:M (2.94) BS07 FE ? GO:0009772 ... Q3J1A6 34728609
    5769 7f6x:A (2.16) BS02 FE ? GO:0046872 ... L7PIL3 N/A
    5770 7f6x:B (2.16) BS02 FE ? GO:0046872 ... L7PIL3 N/A
    5771 7fc0:B (2.643) BS02 FE ? GO:0046872 ... A0A1I4IFL0 35110668
    5772 7fc0:B (2.643) BS03 FE ? GO:0046872 ... A0A1I4IFL0 35110668
    5773 7fc0:B (2.643) BS04 FE ? GO:0046872 ... A0A1I4IFL0 35110668
    5774 7fc0:E (2.643) BS02 FE ? GO:0046872 ... A0A1I4IFL0 35110668
    5775 7fc0:E (2.643) BS03 FE ? GO:0046872 ... A0A1I4IFL0 35110668
    5776 7fc0:E (2.643) BS04 FE ? GO:0046872 ... A0A1I4IFL0 35110668
    5777 7fdw:A (2.277) BS01 FE 3.4.21.- GO:0005576 ... P24627 34734372
    5778 7fdw:B (2.277) BS01 FE 3.4.21.- GO:0005576 ... P24627 34734372
    5779 7ffu:A (2.601) BS01 FE ? GO:0005515 ... P02787 35690040
    5780 7fh5:A (2.0) BS01 FE ? GO:0046872 ... A0A1U8X168 N/A
    5781 7fjg:A (2.72) BS01 FE 1.1.1.- GO:0000166 ... Q8R612 N/A
    5782 7jrd:B (2.85) BS01 FE 3.4.21.- GO:0001503 ... P02788 34751649
    5783 7jrd:B (2.85) BS02 FE 3.4.21.- GO:0001503 ... P02788 34751649
    5784 7k26:A (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P02794 33124805
    5785 7k26:B (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P02794 33124805
    5786 7k26:C (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P02794 33124805
    5787 7k26:D (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P02794 33124805
    5788 7k26:E (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P02794 33124805
    5789 7k26:F (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P02794 33124805
    5790 7k26:G (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P02794 33124805
    5791 7k26:H (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P02794 33124805
    5792 7k26:I (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P02794 33124805
    5793 7k26:J (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P02794 33124805
    5794 7k26:K (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P02794 33124805
    5795 7k26:L (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P02794 33124805
    5796 7ke3:A (2.2) BS01 FE 1.16.3.1
    3.1.21.-
    GO:0004322 ... P02794
    P03211
    34284876
    5797 7ke3:A (2.2) BS02 FE 1.16.3.1
    3.1.21.-
    GO:0004322 ... P02794
    P03211
    34284876
    5798 7ke3:B (2.2) BS01 FE 1.16.3.1
    3.1.21.-
    GO:0004322 ... P02794
    P03211
    34284876
    5799 7ke3:B (2.2) BS02 FE 1.16.3.1
    3.1.21.-
    GO:0004322 ... P02794
    P03211
    34284876
    5800 7ke3:C (2.2) BS01 FE 1.16.3.1
    3.1.21.-
    GO:0004322 ... P02794
    P03211
    34284876

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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