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BioLiP
Download all results in tab-seperated text for 7576 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    4801 6m2i:B (2.45) BS01 FE ? GO:0005737 ... A0A402C2Q3 33398074
    4802 6m2i:B (2.45) BS02 FE ? GO:0005737 ... A0A402C2Q3 33398074
    4803 6m35:A (1.73) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4804 6m35:B (1.73) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4805 6m35:C (1.73) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4806 6m35:D (1.73) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4807 6m35:E (1.73) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4808 6m35:F (1.73) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4809 6m35:G (1.73) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4810 6m35:H (1.73) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4811 6m3x:A (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4812 6m3x:B (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4813 6m3x:C (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4814 6m3x:D (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4815 6m3x:E (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4816 6m3x:F (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4817 6m3x:G (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4818 6m3x:H (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4819 6m3x:I (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4820 6m3x:J (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4821 6m3x:K (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4822 6m3x:L (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4823 6m3x:M (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4824 6m3x:N (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4825 6m3x:O (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4826 6m3x:P (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4827 6m3x:Q (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4828 6m3x:R (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4829 6m3x:S (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4830 6m3x:T (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4831 6m3x:U (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4832 6m3x:V (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4833 6m3x:W (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4834 6m3x:X (2.24) BS01 FE 1.13.11.55 GO:0016491 ... Q972K4 32775998
    4835 6m9r:A (1.69) BS02 FE N/A N/A N/A 30728519
    4836 6m9r:B (1.69) BS02 FE N/A N/A N/A 30728519
    4837 6m9s:A (2.08) BS01 FE N/A N/A N/A 30728519
    4838 6m9s:A (2.08) BS02 FE N/A N/A N/A 30728519
    4839 6m9s:B (2.08) BS01 FE N/A N/A N/A 30728519
    4840 6m9s:B (2.08) BS02 FE N/A N/A N/A 30728519
    4841 6m9s:C (2.08) BS01 FE N/A N/A N/A 30728519
    4842 6m9s:C (2.08) BS02 FE N/A N/A N/A 30728519
    4843 6m9s:D (2.08) BS01 FE N/A N/A N/A 30728519
    4844 6m9s:D (2.08) BS02 FE N/A N/A N/A 30728519
    4845 6mev:A (2.6) BS02 FE 1.14.11.- N/A Q6NYC1 32048991
    4846 6mev:B (2.6) BS02 FE 1.14.11.- N/A Q6NYC1 32048991
    4847 6mev:C (2.6) BS02 FE 1.14.11.- N/A Q6NYC1 32048991
    4848 6mev:D (2.6) BS02 FE 1.14.11.- N/A Q6NYC1 32048991
    4849 6mev:E (2.6) BS02 FE 1.14.11.- N/A Q6NYC1 32048991
    4850 6mev:F (2.6) BS02 FE 1.14.11.- N/A Q6NYC1 32048991
    4851 6mev:G (2.6) BS02 FE 1.14.11.- N/A Q6NYC1 32048991
    4852 6mev:H (2.6) BS02 FE 1.14.11.- N/A Q6NYC1 32048991
    4853 6n0j:A (1.79) BS01 FE 1.13.11.24 GO:0003712 ... O00625 N/A
    4854 6n0k:A (1.46) BS01 FE 1.13.11.24 GO:0003712 ... O00625 N/A
    4855 6n1f:A (2.05) BS01 FE ? GO:0046872 ... Q3JFV4 N/A
    4856 6n1f:B (2.05) BS01 FE ? GO:0046872 ... Q3JFV4 N/A
    4857 6n1f:C (2.05) BS01 FE ? GO:0046872 ... Q3JFV4 N/A
    4858 6n1f:D (2.05) BS01 FE ? GO:0046872 ... Q3JFV4 N/A
    4859 6n1k:A (3.057) BS01 FE 1.14.16.1 GO:0004497 ... P00439 31076506
    4860 6n1k:B (3.057) BS01 FE 1.14.16.1 GO:0004497 ... P00439 31076506
    4861 6n1k:C (3.057) BS01 FE 1.14.16.1 GO:0004497 ... P00439 31076506
    4862 6n1k:D (3.057) BS01 FE 1.14.16.1 GO:0004497 ... P00439 31076506
    4863 6n43:A (2.289) BS02 FE 1.13.11.20 GO:0000097 ... Q16878 30946568
    4864 6n63:A (1.72) BS02 FE 1.16.3.1 GO:0004322 ... A0A0F5HNH9 31282860
    4865 6n9i:A (1.6) BS02 FE 3.1.1.81 GO:0016787 ... A0A023DFE8 30864300
    4866 6n9i:B (1.6) BS02 FE 3.1.1.81 GO:0016787 ... A0A023DFE8 30864300
    4867 6n9i:C (1.6) BS02 FE 3.1.1.81 GO:0016787 ... A0A023DFE8 30864300
    4868 6n9q:D (2.35) BS03 FE 3.1.1.81 GO:0016787 ... A0A023DFE8 30864300
    4869 6n9q:P (2.35) BS03 FE 3.1.1.81 GO:0016787 ... A0A023DFE8 30864300
    4870 6n9r:A (1.75) BS02 FE 3.1.1.81 GO:0016787 ... A0A023DFE8 30864300
    4871 6n9r:P (1.75) BS02 FE 3.1.1.81 GO:0016787 ... A0A023DFE8 30864300
    4872 6n9r:X (1.75) BS02 FE 3.1.1.81 GO:0016787 ... A0A023DFE8 30864300
    4873 6nhl:A (2.101) BS01 FE N/A GO:0003824 ... N/A 30341796
    4874 6nlr:B (2.1) BS02 FE N/A GO:0000105 ... N/A 31794207
    4875 6nlr:B (2.1) BS03 FE N/A GO:0000105 ... N/A 31794207
    4876 6nlr:C (2.1) BS03 FE N/A GO:0000105 ... N/A 31794207
    4877 6npa:A (1.73) BS01 FE 1.13.11.90 GO:0016491 ... A0A4V8H040 30789718
    4878 6npa:B (1.73) BS01 FE 1.13.11.90 GO:0016491 ... A0A4V8H040 30789718
    4879 6npa:B (1.73) BS02 FE 1.13.11.90 GO:0016491 ... A0A4V8H040 30789718
    4880 6npa:B (1.73) BS03 FE 1.13.11.90 GO:0016491 ... A0A4V8H040 30789718
    4881 6npa:C (1.73) BS01 FE 1.13.11.90 GO:0016491 ... A0A4V8H040 30789718
    4882 6npa:D (1.73) BS01 FE 1.13.11.90 GO:0016491 ... A0A4V8H040 30789718
    4883 6nsi:A (2.00006) BS01 FE ? GO:0007155 ... Q9S529 31611288
    4884 6nuc:A (1.9) BS02 FE 3.1.3.16 GO:0016787 ... Q08209 31375679
    4885 6nuf:A (1.9) BS02 FE 3.1.3.16 GO:0016787 ... Q08209 31375679
    4886 6nuu:A (2.3) BS02 FE 3.1.3.16 GO:0016787 ... Q08209 31375679
    4887 6o6l:A (2.25) BS02 FE ? GO:0046872 ... G2LET6 32257583
    4888 6o6l:B (2.25) BS02 FE ? GO:0046872 ... G2LET6 32257583
    4889 6o6l:C (2.25) BS02 FE ? GO:0046872 ... G2LET6 32257583
    4890 6o6l:D (2.25) BS02 FE ? GO:0046872 ... G2LET6 32257583
    4891 6o6m:A (2.506) BS01 FE ? GO:0046872 ... G2LET6 32257583
    4892 6o6m:B (2.506) BS01 FE ? GO:0046872 ... G2LET6 32257583
    4893 6o6m:C (2.506) BS01 FE ? GO:0046872 ... G2LET6 32257583
    4894 6o6m:D (2.506) BS01 FE ? GO:0046872 ... G2LET6 32257583
    4895 6o7l:B (2.26) BS02 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4896 6o7l:B (2.26) BS03 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4897 6o7l:D (2.26) BS01 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4898 6o7l:D (2.26) BS02 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4899 6o7m:B (1.4) BS02 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4900 6o7m:B (1.4) BS03 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4901 6o7m:D (1.4) BS01 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4902 6o7m:D (1.4) BS03 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4903 6o7n:B (1.75) BS02 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4904 6o7n:B (1.75) BS03 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4905 6o7n:D (1.75) BS01 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4906 6o7n:D (1.75) BS03 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4907 6o7o:B (1.89) BS02 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4908 6o7o:B (1.89) BS03 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4909 6o7o:D (1.89) BS01 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4910 6o7o:D (1.89) BS03 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4911 6o7p:B (1.7) BS02 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4912 6o7p:B (1.7) BS03 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4913 6o7p:D (1.7) BS01 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4914 6o7p:D (1.7) BS03 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4915 6o7q:B (2.0) BS02 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4916 6o7q:B (2.0) BS03 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4917 6o7q:D (2.0) BS01 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4918 6o7q:D (2.0) BS03 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4919 6o7r:B (2.27) BS02 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4920 6o7r:B (2.27) BS03 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4921 6o7r:D (2.27) BS01 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4922 6o7r:D (2.27) BS03 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4923 6o7s:B (2.27) BS02 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4924 6o7s:B (2.27) BS03 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4925 6o7s:D (2.27) BS01 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4926 6o7s:D (2.27) BS03 FE 1.18.6.1 GO:0005524 ... P07329 31146522
    4927 6obn:A (2.7) BS01 FE 3.1.3.16 GO:0000164 ... P62136 31548429
    4928 6obn:B (2.7) BS01 FE 3.1.3.16 GO:0000164 ... P62136 31548429
    4929 6of5:A (2.3) BS02 FE 3.1.3.2 GO:0003993 ... P80366 31445230
    4930 6of5:B (2.3) BS02 FE 3.1.3.2 GO:0003993 ... P80366 31445230
    4931 6of5:C (2.3) BS02 FE 3.1.3.2 GO:0003993 ... P80366 31445230
    4932 6of5:D (2.3) BS02 FE 3.1.3.2 GO:0003993 ... P80366 31445230
    4933 6ofd:A (2.2) BS02 FE 3.1.3.2 GO:0003993 ... P80366 31445230
    4934 6ofd:B (2.2) BS02 FE 3.1.3.2 GO:0003993 ... P80366 31445230
    4935 6ofd:C (2.2) BS02 FE 3.1.3.2 GO:0003993 ... P80366 31445230
    4936 6ofd:D (2.2) BS02 FE 3.1.3.2 GO:0003993 ... P80366 31445230
    4937 6ojt:A (3.0) BS02 FE 1.13.11.43 GO:0005506 ... Q53353 31292192
    4938 6ojt:B (3.0) BS02 FE 1.13.11.43 GO:0005506 ... Q53353 31292192
    4939 6ojw:A (2.6) BS01 FE 1.13.11.43 GO:0005506 ... Q53353 31292192
    4940 6ojw:B (2.6) BS01 FE 1.13.11.43 GO:0005506 ... Q53353 31292192
    4941 6on1:A (1.982) BS01 FE ? GO:0046872 ... A0A5H1ZR51 31180203
    4942 6on1:B (1.982) BS01 FE ? GO:0046872 ... A0A5H1ZR51 31180203
    4943 6on1:C (1.982) BS01 FE ? GO:0046872 ... A0A5H1ZR51 31180203
    4944 6on1:D (1.982) BS01 FE ? GO:0046872 ... A0A5H1ZR51 31180203
    4945 6on1:E (1.982) BS01 FE ? GO:0046872 ... A0A5H1ZR51 31180203
    4946 6on1:F (1.982) BS01 FE ? GO:0046872 ... A0A5H1ZR51 31180203
    4947 6p5q:A (1.86) BS01 FE ? GO:0046872 ... Q4K8M0 31487162
    4948 6p5q:A (1.86) BS02 FE ? GO:0046872 ... Q4K8M0 31487162
    4949 6p5q:B (1.86) BS01 FE ? GO:0046872 ... Q4K8M0 31487162
    4950 6p5q:B (1.86) BS02 FE ? GO:0046872 ... Q4K8M0 31487162
    4951 6pah:A (2.15) BS01 FE 1.14.16.1 GO:0004497 ... P00439 9843368
    4952 6py9:A (2.2) BS02 FE 3.1.3.2 GO:0003993 ... P80366 32234228
    4953 6py9:B (2.2) BS02 FE 3.1.3.2 GO:0003993 ... P80366 32234228
    4954 6py9:C (2.2) BS02 FE 3.1.3.2 GO:0003993 ... P80366 32234228
    4955 6py9:D (2.2) BS02 FE 3.1.3.2 GO:0003993 ... P80366 32234228
    4956 6q09:A (1.75) BS01 FE ? GO:0046872 ... A0A1V3WIE5 31913442
    4957 6q09:A (1.75) BS02 FE ? GO:0046872 ... A0A1V3WIE5 31913442
    4958 6qgr:A (1.839) BS03 FE 1.12.98.1 GO:0008901 ... A0A0E3QYL7 31591784
    4959 6qgt:A (1.988) BS03 FE 1.12.98.1 GO:0008901 ... A0A0E3QYL7 31591784
    4960 6qii:A (2.28) BS03 FE 1.12.98.1 GO:0008901 ... A0A0E3QYL7 31591784
    4961 6qjc:A (1.7) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4962 6qjc:B (1.7) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4963 6qjc:C (1.7) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4964 6qjc:D (1.7) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4965 6qjv:A (1.905) BS02 FE 1.17.4.1 GO:0009263 ... Q5KW80 32062969
    4966 6qk1:A (1.754) BS02 FE 1.17.4.1 GO:0009263 ... Q5KW80 32062969
    4967 6qka:A (2.1) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4968 6qka:B (2.1) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4969 6qka:C (2.1) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4970 6qka:D (2.1) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4971 6qka:E (2.1) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4972 6qka:F (2.1) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4973 6qki:A (2.04) BS01 FE ? GO:0046872 ... G2LET6 30883103
    4974 6qki:B (2.04) BS01 FE ? GO:0046872 ... G2LET6 30883103
    4975 6qki:C (2.04) BS01 FE ? GO:0046872 ... G2LET6 30883103
    4976 6qki:D (2.04) BS01 FE ? GO:0046872 ... G2LET6 30883103
    4977 6qkj:A (2.2) BS01 FE ? GO:0046872 ... G2LET6 30883103
    4978 6qkj:A (2.2) BS03 FE ? GO:0046872 ... G2LET6 30883103
    4979 6qkj:B (2.2) BS01 FE ? GO:0046872 ... G2LET6 30883103
    4980 6qkj:B (2.2) BS03 FE ? GO:0046872 ... G2LET6 30883103
    4981 6qkm:A (2.102) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4982 6qkm:B (2.102) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4983 6qkm:C (2.102) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4984 6qkm:D (2.102) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4985 6qkm:E (2.102) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4986 6qkm:F (2.102) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4987 6qne:A (1.8) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4988 6qne:B (1.8) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4989 6qne:C (1.8) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4990 6qne:D (1.8) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4991 6qne:E (1.8) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4992 6qne:F (1.8) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4993 6qo0:A (1.65) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4994 6qo0:B (1.65) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4995 6qo0:C (1.65) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4996 6qo0:D (1.65) BS01 FE 1.13.11.55 GO:0005737 ... P29082 N/A
    4997 6qob:A (1.457) BS01 FE 1.17.4.1 GO:0004748 ... Q81TB4 31410573
    4998 6qob:A (1.457) BS02 FE 1.17.4.1 GO:0004748 ... Q81TB4 31410573
    4999 6qob:B (1.457) BS01 FE 1.17.4.1 GO:0004748 ... Q81TB4 31410573
    5000 6qob:B (1.457) BS02 FE 1.17.4.1 GO:0004748 ... Q81TB4 31410573
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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