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BioLiP
Download all results in tab-seperated text for 7191 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    401 1k0i:A (1.8) BS01 FAD 1.14.13.2 GO:0004497 ... P20586 11805318
    402 1k0j:A (2.2) BS01 FAD 1.14.13.2 GO:0004497 ... P20586 11805318
    403 1k0l:A (2.0) BS02 FAD 1.14.13.2 GO:0004497 ... P20586 11805318
    404 1k4q:A (1.9) BS01 FAD 1.8.1.7 GO:0004362 ... P00390 11705998
    405 1kbo:A (2.3) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    406 1kbo:A (2.3) BS04 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    407 1kbo:B (2.3) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    408 1kbo:B (2.3) BS04 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    409 1kbo:C (2.3) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    410 1kbo:C (2.3) BS04 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    411 1kbo:D (2.3) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    412 1kbo:D (2.3) BS04 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    413 1kbq:A (1.8) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    414 1kbq:A (1.8) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    415 1kbq:B (1.8) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    416 1kbq:B (1.8) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    417 1kbq:C (1.8) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    418 1kbq:C (1.8) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    419 1kbq:D (1.8) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    420 1kbq:D (1.8) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 11735396
    421 1kf6:A (2.7) BS02 FAD 1.3.5.1 GO:0000104 ... P00363 11850430
    422 1kf6:M (2.7) BS02 FAD 1.3.5.1 GO:0000104 ... P00363 11850430
    423 1kfy:A (3.6) BS02 FAD 1.3.5.1 GO:0000104 ... P00363 11850430
    424 1kfy:M (3.6) BS02 FAD 1.3.5.1 GO:0000104 ... P00363 11850430
    425 1kif:A (2.6) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 8755502
    426 1kif:B (2.6) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 8755502
    427 1kif:C (2.6) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 8755502
    428 1kif:D (2.6) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 8755502
    429 1kif:E (2.6) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 8755502
    430 1kif:F (2.6) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 8755502
    431 1kif:G (2.6) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 8755502
    432 1kif:H (2.6) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 8755502
    433 1knp:A (2.6) BS01 FAD 1.4.3.16
    1.5.99.-    		 GO:0000166 ... P10902 11863440
    434 1knr:A (2.5) BS01 FAD 1.4.3.16
    1.5.99.-    		 GO:0000166 ... P10902 11863440 MOAD: Kd=8.1uM
    435 1kq4:A (2.25) BS01 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12193646
    436 1kq4:A (2.25) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12193646
    437 1kq4:A (2.25) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12193646
    438 1kq4:B (2.25) BS01 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12193646
    439 1kq4:B (2.25) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12193646
    440 1kq4:B (2.25) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12193646
    441 1kq4:C (2.25) BS01 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12193646
    442 1kq4:C (2.25) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12193646
    443 1kq4:C (2.25) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12193646
    444 1kq4:D (2.25) BS01 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12193646
    445 1kq4:D (2.25) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12193646
    446 1kq4:D (2.25) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12193646
    447 1krh:A (1.5) BS02 FAD 1.18.1.3 GO:0008860 ... P07771 12051836
    448 1krh:B (1.5) BS02 FAD 1.18.1.3 GO:0008860 ... P07771 12051836
    449 1kss:A (1.8) BS06 FAD 1.3.2.4 GO:0008202 ... P0C278 12093271
    450 1ksu:A (2.0) BS06 FAD 1.3.2.4 GO:0008202 ... P0C278 12093271
    451 1ksu:B (2.0) BS06 FAD 1.3.2.4 GO:0008202 ... P0C278 12093271
    452 1l0v:A (3.3) BS02 FAD 1.3.5.1 GO:0000104 ... P00363 11850430
    453 1l0v:M (3.3) BS02 FAD 1.3.5.1 GO:0000104 ... P00363 11850430
    454 1l9c:A (1.9) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 12146941
    455 1l9c:B (1.9) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 12146941
    456 1l9d:A (1.95) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 12146941
    457 1l9d:B (1.95) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 12146941
    458 1l9e:A (1.85) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 12146941
    459 1l9e:B (1.85) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 12146941
    460 1lj1:A (2.0) BS05 FAD 1.3.2.4 GO:0008202 ... P0C278 12356299
    461 1lj1:B (2.0) BS05 FAD 1.3.2.4 GO:0008202 ... P0C278 12356299
    462 1lpf:A (2.8) BS01 FAD 1.8.1.4 GO:0004148 ... P14218 8487301
    463 1lpf:A (2.8) BS02 FAD 1.8.1.4 GO:0004148 ... P14218 8487301
    464 1lpf:B (2.8) BS01 FAD 1.8.1.4 GO:0004148 ... P14218 8487301
    465 1lqt:A (1.05) BS01 FAD 1.18.1.2 GO:0004324 ... P9WIQ3 12102623
    466 1lqt:B (1.05) BS01 FAD 1.18.1.2 GO:0004324 ... P9WIQ3 12102623
    467 1lqu:A (1.25) BS01 FAD 1.18.1.2 GO:0004324 ... P9WIQ3 12102623
    468 1lqu:B (1.25) BS01 FAD 1.18.1.2 GO:0004324 ... P9WIQ3 12102623
    469 1lvl:A (2.45) BS01 FAD 1.8.1.4 GO:0004148 ... P09063 1325638
    470 1m64:A (1.8) BS05 FAD 1.3.2.4 GO:0008202 ... P0C278 12356299
    471 1m64:B (1.8) BS05 FAD 1.3.2.4 GO:0008202 ... P0C278 12356299
    472 1m6i:A (1.8) BS01 FAD 1.6.99.- GO:0016491 ... O95831 12198487
    473 1mbb:A (2.3) BS02 FAD 1.3.1.98 GO:0005737 ... P08373 8634262
    474 1mbt:A (3.0) BS01 FAD 1.3.1.98 GO:0005737 ... P08373 8805513
    475 1mo9:A (1.65) BS01 FAD 1.8.1.5 GO:0003955 ... Q56839 12390015
    476 1mo9:B (1.65) BS01 FAD 1.8.1.5 GO:0003955 ... Q56839 12390015
    477 1mok:A (2.8) BS01 FAD 1.8.1.5 GO:0003955 ... Q56839 12390015
    478 1mok:B (2.8) BS01 FAD 1.8.1.5 GO:0003955 ... Q56839 12390015
    479 1mok:C (2.8) BS01 FAD 1.8.1.5 GO:0003955 ... Q56839 12390015
    480 1mok:D (2.8) BS01 FAD 1.8.1.5 GO:0003955 ... Q56839 12390015
    481 1n0h:A (2.8) BS04 FAD 2.2.1.6 GO:0000287 ... P07342 14557277
    482 1n0h:B (2.8) BS06 FAD 2.2.1.6 GO:0000287 ... P07342 14557277
    483 1n1p:A (0.95) BS02 FAD 1.1.3.6
    5.3.3.1    		 GO:0004769 ... P12676 14558826
    484 1n4v:A (1.0) BS01 FAD 1.1.3.6
    5.3.3.1    		 GO:0004769 ... P12676 16604066
    485 1n4w:A (0.92) BS02 FAD 1.1.3.6
    5.3.3.1    		 GO:0004769 ... P12676 16604066
    486 1n5w:A (1.5) BS03 FAD 1.2.5.3 GO:0008805 ... P19921 12475995
    487 1n5w:C (1.5) BS01 FAD 1.2.5.3 GO:0008805 ... P19920 12475995
    488 1n5w:D (1.5) BS04 FAD 1.2.5.3 GO:0008805 ... P19921 12475995
    489 1n5w:F (1.5) BS01 FAD 1.2.5.3 GO:0008805 ... P19920 12475995
    490 1n5x:A (2.8) BS03 FAD 1.17.1.4
    1.17.3.2    		 GO:0002197 ... P80457 12421831
    491 1n5x:B (2.8) BS03 FAD 1.17.1.4
    1.17.3.2    		 GO:0002197 ... P80457 12421831
    492 1n60:A (1.19) BS04 FAD 1.2.5.3 GO:0008805 ... P19921 12475995
    493 1n60:C (1.19) BS01 FAD 1.2.5.3 GO:0008805 ... P19920 12475995
    494 1n60:D (1.19) BS04 FAD 1.2.5.3 GO:0008805 ... P19921 12475995
    495 1n60:F (1.19) BS01 FAD 1.2.5.3 GO:0008805 ... P19920 12475995
    496 1n61:A (1.3) BS04 FAD 1.2.5.3 GO:0008805 ... P19921 12475995
    497 1n61:C (1.3) BS01 FAD 1.2.5.3 GO:0008805 ... P19920 12475995
    498 1n61:F (1.3) BS01 FAD 1.2.5.3 GO:0008805 ... P19920 12475995
    499 1n62:A (1.09) BS04 FAD 1.2.5.3 GO:0008805 ... P19921 12475995
    500 1n62:C (1.09) BS01 FAD 1.2.5.3 GO:0008805 ... P19920 12475995
    501 1n62:D (1.09) BS04 FAD 1.2.5.3 GO:0008805 ... P19921 12475995
    502 1n62:F (1.09) BS01 FAD 1.2.5.3 GO:0008805 ... P19920 12475995
    503 1n63:A (1.21) BS04 FAD 1.2.5.3 GO:0008805 ... P19921 12475995
    504 1n63:C (1.21) BS01 FAD 1.2.5.3 GO:0008805 ... P19920 12475995
    505 1n63:D (1.21) BS04 FAD 1.2.5.3 GO:0008805 ... P19921 12475995
    506 1n63:F (1.21) BS01 FAD 1.2.5.3 GO:0008805 ... P19920 12475995
    507 1nda:A (3.3) BS01 FAD 1.8.1.12 GO:0004362 ... P28593 8159665
    508 1nda:B (3.3) BS01 FAD 1.8.1.12 GO:0004362 ... P28593 8159665
    509 1nda:C (3.3) BS01 FAD 1.8.1.12 GO:0004362 ... P28593 8159665
    510 1nda:D (3.3) BS01 FAD 1.8.1.12 GO:0004362 ... P28593 8159665
    511 1ndh:A (2.1) BS01 FAD 1.6.2.2 GO:0004128 ... P83686 7893687
    512 1nek:A (2.6) BS03 FAD 1.3.5.1 GO:0000104 ... P0AC41 12560550
    513 1nen:A (2.9) BS03 FAD 1.3.5.1 GO:0000104 ... P0AC41 12560550
    514 1ng3:A (2.6) BS02 FAD 1.4.3.19 GO:0005737 ... O31616 12627963
    515 1ng3:B (2.6) BS01 FAD 1.4.3.19 GO:0005737 ... O31616 12627963
    516 1ng4:A (2.3) BS01 FAD 1.4.3.19 GO:0005737 ... O31616 12627963
    517 1ng4:B (2.3) BS02 FAD 1.4.3.19 GO:0005737 ... O31616 12627963
    518 1nhp:A (2.0) BS01 FAD 1.11.1.1 GO:0004601 ... P37062 7766608
    519 1nhq:A (2.0) BS01 FAD 1.11.1.1 GO:0004601 ... P37062 7766608
    520 1nhr:A (2.1) BS01 FAD 1.11.1.1 GO:0004601 ... P37062 7711038
    521 1nhs:A (2.0) BS01 FAD 1.11.1.1 GO:0004601 ... P37062 7711038
    522 1np7:A (1.9) BS01 FAD ? GO:0000719 ... P77967 12535521
    523 1np7:B (1.9) BS01 FAD ? GO:0000719 ... P77967 12535521
    524 1npx:A (2.16) BS01 FAD 1.11.1.1 GO:0004601 ... P37062 1942054
    525 1o26:A (1.6) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    526 1o26:A (1.6) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    527 1o26:A (1.6) BS04 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    528 1o26:B (1.6) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    529 1o26:B (1.6) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    530 1o26:B (1.6) BS05 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    531 1o26:C (1.6) BS01 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    532 1o26:C (1.6) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    533 1o26:C (1.6) BS04 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    534 1o26:D (1.6) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    535 1o26:D (1.6) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    536 1o26:D (1.6) BS04 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    537 1o27:A (2.3) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    538 1o27:A (2.3) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    539 1o27:A (2.3) BS04 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    540 1o27:B (2.3) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    541 1o27:B (2.3) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    542 1o27:B (2.3) BS05 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    543 1o27:C (2.3) BS01 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    544 1o27:C (2.3) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    545 1o27:C (2.3) BS04 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    546 1o27:D (2.3) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    547 1o27:D (2.3) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    548 1o27:D (2.3) BS04 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    549 1o29:A (2.0) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    550 1o29:A (2.0) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    551 1o29:A (2.0) BS04 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    552 1o29:B (2.0) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    553 1o29:B (2.0) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    554 1o29:B (2.0) BS05 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    555 1o29:C (2.0) BS01 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    556 1o29:C (2.0) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    557 1o29:C (2.0) BS04 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    558 1o29:D (2.0) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    559 1o29:D (2.0) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    560 1o29:D (2.0) BS04 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    561 1o2a:A (1.8) BS01 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    562 1o2a:A (1.8) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    563 1o2a:A (1.8) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    564 1o2a:B (1.8) BS01 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    565 1o2a:B (1.8) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    566 1o2a:B (1.8) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    567 1o2a:C (1.8) BS01 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    568 1o2a:C (1.8) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    569 1o2a:C (1.8) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    570 1o2a:D (1.8) BS01 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    571 1o2a:D (1.8) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    572 1o2a:D (1.8) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    573 1o2b:A (2.45) BS01 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    574 1o2b:A (2.45) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    575 1o2b:A (2.45) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    576 1o2b:B (2.45) BS01 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    577 1o2b:B (2.45) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    578 1o2b:B (2.45) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    579 1o2b:C (2.45) BS01 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    580 1o2b:C (2.45) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    581 1o2b:C (2.45) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    582 1o2b:D (2.45) BS01 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    583 1o2b:D (2.45) BS02 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    584 1o2b:D (2.45) BS03 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 12791256
    585 1o5w:A (3.2) BS01 FAD 1.4.3.21
    1.4.3.4    		 GO:0005739 ... P21396 15050826
    586 1o5w:B (3.2) BS01 FAD 1.4.3.21
    1.4.3.4    		 GO:0005739 ... P21396 15050826
    587 1o5w:C (3.2) BS01 FAD 1.4.3.21
    1.4.3.4    		 GO:0005739 ... P21396 15050826
    588 1o5w:D (3.2) BS01 FAD 1.4.3.21
    1.4.3.4    		 GO:0005739 ... P21396 15050826
    589 1o96:A (3.1) BS02 FAD ? GO:0000166 ... P53570 12567183
    590 1o96:B (3.1) BS01 FAD ? GO:0009055 ... P53571 12567183
    591 1o96:C (3.1) BS02 FAD ? GO:0000166 ... P53570 12567183
    592 1o96:D (3.1) BS01 FAD ? GO:0009055 ... P53571 12567183
    593 1o96:E (3.1) BS02 FAD ? GO:0000166 ... P53570 12567183
    594 1o96:F (3.1) BS01 FAD ? GO:0009055 ... P53571 12567183
    595 1o96:Z (3.1) BS01 FAD ? GO:0009055 ... P53571 12567183
    596 1o97:C (1.6) BS02 FAD ? GO:0000166 ... P53570 12567183
    597 1o97:D (1.6) BS01 FAD ? GO:0009055 ... P53571 12567183
    598 1ogi:A (1.64) BS01 FAD 1.18.1.2 GO:0016491 ... P21890 14500716
    599 1ogj:A (1.64) BS01 FAD 1.18.1.2 GO:0016491 ... P21890 14500716
    600 1oj9:A (2.3) BS01 FAD 1.4.3.21
    1.4.3.4    		 GO:0005515 ... P27338 12913124
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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