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BioLiP
Download all results in tab-seperated text for 7191 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    5601 6rvb:B (2.9) BS02 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    5602 6rvb:C (2.9) BS01 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    5603 6rvb:D (2.9) BS01 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    5604 6rvh:A (3.0) BS01 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    5605 6rvh:A (3.0) BS04 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    5606 6rvh:B (3.0) BS03 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    5607 6rvh:C (3.0) BS01 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    5608 6rvh:D (3.0) BS01 FAD 1.6.-.- GO:0000166 ... Q72HK3 31520616
    5609 6s35:A (3.1) BS02 FAD 1.14.99.66 GO:0005634 ... O60341 32149225
    5610 6s6s:E (3.9) BS03 FAD 1.4.1.13 GO:0004355 ... Q05756 31473159
    5611 6s6s:F (3.9) BS03 FAD 1.4.1.13 GO:0004355 ... Q05756 31473159
    5612 6s6s:G (3.9) BS03 FAD 1.4.1.13 GO:0004355 ... Q05756 31473159
    5613 6s6s:H (3.9) BS03 FAD 1.4.1.13 GO:0004355 ... Q05756 31473159
    5614 6s6t:E (4.1) BS03 FAD 1.4.1.13 GO:0004355 ... Q05756 31473159
    5615 6s6t:F (4.1) BS03 FAD 1.4.1.13 GO:0004355 ... Q05756 31473159
    5616 6s6t:G (4.1) BS03 FAD 1.4.1.13 GO:0004355 ... Q05756 31473159
    5617 6s6u:G (3.5) BS03 FAD 1.4.1.13 GO:0004355 ... Q05756 31473159
    5618 6s6u:H (3.5) BS03 FAD 1.4.1.13 GO:0004355 ... Q05756 31473159
    5619 6s6u:I (3.5) BS03 FAD 1.4.1.13 GO:0004355 ... Q05756 31473159
    5620 6s6u:J (3.5) BS03 FAD 1.4.1.13 GO:0004355 ... Q05756 31473159
    5621 6s6x:G (3.5) BS03 FAD 1.4.1.13 GO:0004355 ... Q05756 31473159
    5622 6s6x:H (3.5) BS03 FAD 1.4.1.13 GO:0004355 ... Q05756 31473159
    5623 6s6x:I (3.5) BS03 FAD 1.4.1.13 GO:0004355 ... Q05756 31473159
    5624 6s6x:J (3.5) BS03 FAD 1.4.1.13 GO:0004355 ... Q05756 31473159
    5625 6s6x:K (3.5) BS03 FAD 1.4.1.13 GO:0004355 ... Q05756 31473159
    5626 6s6x:L (3.5) BS03 FAD 1.4.1.13 GO:0004355 ... Q05756 31473159
    5627 6sd8:A (1.51) BS01 FAD 1.3.99.- GO:0000166 ... Q6MJ59 31442339
    5628 6sd8:A (1.51) BS02 FAD 1.3.99.- GO:0000166 ... Q6MJ59 31442339
    5629 6sd8:X (1.51) BS01 FAD 1.3.99.- GO:0000166 ... Q6MJ59 31442339
    5630 6sd8:X (1.51) BS02 FAD 1.3.99.- GO:0000166 ... Q6MJ59 31442339
    5631 6sda:A (1.87) BS01 FAD 1.3.99.- GO:0000166 ... Q6MJ59 31442339
    5632 6sda:A (1.87) BS02 FAD 1.3.99.- GO:0000166 ... Q6MJ59 31442339
    5633 6sda:B (1.87) BS01 FAD 1.3.99.- GO:0000166 ... Q6MJ59 31442339
    5634 6sda:B (1.87) BS03 FAD 1.3.99.- GO:0000166 ... Q6MJ59 31442339
    5635 6se3:A (2.8) BS01 FAD N/A GO:0004499 ... N/A 31873300
    5636 6se3:B (2.8) BS01 FAD N/A GO:0004499 ... N/A 31873300
    5637 6se3:C (2.8) BS01 FAD N/A GO:0004499 ... N/A 31873300
    5638 6se3:D (2.8) BS01 FAD N/A GO:0004499 ... N/A 31873300
    5639 6se3:E (2.8) BS01 FAD N/A GO:0004499 ... N/A 31873300
    5640 6se3:F (2.8) BS01 FAD N/A GO:0004499 ... N/A 31873300
    5641 6sek:A (2.7) BS01 FAD N/A GO:0004499 ... N/A 31873300
    5642 6sek:B (2.7) BS01 FAD N/A GO:0004499 ... N/A 31873300
    5643 6sem:A (2.8) BS01 FAD N/A GO:0004499 ... N/A 31873300
    5644 6sem:B (2.8) BS01 FAD N/A GO:0004499 ... N/A 31873300
    5645 6sem:C (2.8) BS01 FAD N/A GO:0004499 ... N/A 31873300
    5646 6sem:D (2.8) BS01 FAD N/A GO:0004499 ... N/A 31873300
    5647 6sf0:A (3.01) BS01 FAD N/A GO:0004499 ... N/A 31873300
    5648 6sf0:B (3.01) BS01 FAD N/A GO:0004499 ... N/A 31873300
    5649 6sf0:C (3.01) BS01 FAD N/A GO:0004499 ... N/A 31873300
    5650 6sf0:D (3.01) BS01 FAD N/A GO:0004499 ... N/A 31873300
    5651 6sls:A (2.32) BS02 FAD 1.14.19.59 GO:0000166 ... A1E280 31589794
    5652 6sls:B (2.32) BS03 FAD 1.14.19.59 GO:0000166 ... A1E280 31589794
    5653 6slt:B (2.7) BS02 FAD 1.14.19.59 GO:0000166 ... A1E280 31589794
    5654 6sw1:A (1.8) BS01 FAD ? GO:0000166 ... Q9HWJ1 32451409 MOAD: Kd=37.5nM
    5655 6sw2:A (1.7) BS01 FAD ? GO:0000166 ... Q9HWJ1 32451409 MOAD: Kd=259.8nM
    5656 6t1t:A (2.08) BS01 FAD 1.6.2.4 GO:0000166 ... Q5PXH3 31882753
    5657 6t1t:B (2.08) BS01 FAD 1.6.2.4 GO:0000166 ... Q5PXH3 31882753
    5658 6t1u:A (1.5) BS01 FAD 1.6.2.4 GO:0000166 ... Q5PXH3 31882753
    5659 6t1u:B (1.5) BS01 FAD 1.6.2.4 GO:0000166 ... Q5PXH3 31882753
    5660 6t86:A (2.56) BS01 FAD 1.3.99.33 GO:0010181 ... Q8CVD0 33649331
    5661 6t87:A (1.56) BS01 FAD 1.3.99.33 GO:0010181 ... Q8CVD0 33649331
    5662 6t88:A (1.4) BS01 FAD 1.3.99.33 GO:0010181 ... Q8CVD0 33649331
    5663 6t95:A (2.5) BS01 FAD 1.8.1.12 GO:0000166 ... A4HSF7 36332553
    5664 6t97:A (2.8) BS01 FAD 1.8.1.12 GO:0000166 ... A4HSF7 N/A
    5665 6t98:A (3.0) BS02 FAD 1.8.1.12 GO:0000166 ... A4HSF7 36332553
    5666 6te1:A (3.11) BS03 FAD 1.14.99.66 GO:0000122 ... O60341 32435381
    5667 6tek:A (1.8) BS01 FAD ? GO:0016491 ... A0A100XEC2 32296173
    5668 6tek:B (1.8) BS01 FAD ? GO:0016491 ... A0A100XEC2 32296173
    5669 6tjr:A (1.43) BS02 FAD ? GO:0000166 ... D8JT26 32750208
    5670 6tjr:B (1.43) BS02 FAD ? GO:0000166 ... D8JT26 32750208
    5671 6tuk:B (1.9) BS01 FAD ? GO:0000166 ... Q47QF8 32744244
    5672 6tuy:A (2.6) BS01 FAD 1.14.99.66 GO:0000122 ... O60341 35525212
    5673 6u0p:A (2.02) BS01 FAD ? GO:0000166 ... W0C4C9 32111738
    5674 6u0p:B (2.02) BS01 FAD ? GO:0000166 ... W0C4C9 32111738
    5675 6u0p:C (2.02) BS01 FAD ? GO:0000166 ... W0C4C9 32111738
    5676 6u0p:D (2.02) BS01 FAD ? GO:0000166 ... W0C4C9 32111738
    5677 6u0p:E (2.02) BS01 FAD ? GO:0000166 ... W0C4C9 32111738
    5678 6u0p:F (2.02) BS01 FAD ? GO:0000166 ... W0C4C9 32111738
    5679 6u0s:A (2.52) BS01 FAD ? GO:0000166 ... W0C4C9 32111738
    5680 6u0s:B (2.52) BS01 FAD ? GO:0000166 ... W0C4C9 32111738
    5681 6u0s:C (2.52) BS01 FAD ? GO:0000166 ... W0C4C9 32111738
    5682 6u0s:D (2.52) BS01 FAD ? GO:0000166 ... W0C4C9 32111738
    5683 6u0s:E (2.52) BS01 FAD ? GO:0000166 ... W0C4C9 32111738
    5684 6u0s:F (2.52) BS01 FAD ? GO:0000166 ... W0C4C9 32111738
    5685 6u9d:A (3.194) BS03 FAD 2.2.1.6 GO:0000287 ... P07342 32640464
    5686 6u9d:B (3.194) BS05 FAD 2.2.1.6 GO:0000287 ... P07342 32640464
    5687 6u9d:E (3.194) BS03 FAD 2.2.1.6 GO:0000287 ... P07342 32640464
    5688 6u9d:F (3.194) BS05 FAD 2.2.1.6 GO:0000287 ... P07342 32640464
    5689 6u9d:I (3.194) BS03 FAD 2.2.1.6 GO:0000287 ... P07342 32640464
    5690 6u9d:J (3.194) BS05 FAD 2.2.1.6 GO:0000287 ... P07342 32640464
    5691 6u9d:M (3.194) BS03 FAD 2.2.1.6 GO:0000287 ... P07342 32640464
    5692 6u9d:N (3.194) BS03 FAD 2.2.1.6 GO:0000287 ... P07342 32640464
    5693 6u9d:Q (3.194) BS03 FAD 2.2.1.6 GO:0000287 ... P07342 32640464
    5694 6u9d:R (3.194) BS03 FAD 2.2.1.6 GO:0000287 ... P07342 32640464
    5695 6u9d:U (3.194) BS03 FAD 2.2.1.6 GO:0000287 ... P07342 32640464
    5696 6u9d:V (3.194) BS05 FAD 2.2.1.6 GO:0000287 ... P07342 32640464
    5697 6u9h:A (3.8) BS02 FAD 2.2.1.6 GO:0000287 ... P17597 32640464
    5698 6u9h:B (3.8) BS03 FAD 2.2.1.6 GO:0000287 ... P17597 32640464
    5699 6u9h:H (3.8) BS02 FAD 2.2.1.6 GO:0000287 ... P17597 32640464
    5700 6u9h:I (3.8) BS03 FAD 2.2.1.6 GO:0000287 ... P17597 32640464
    5701 6u9h:L (3.8) BS02 FAD 2.2.1.6 GO:0000287 ... P17597 32640464
    5702 6u9h:M (3.8) BS03 FAD 2.2.1.6 GO:0000287 ... P17597 32640464
    5703 6u9h:P (3.8) BS02 FAD 2.2.1.6 GO:0000287 ... P17597 32640464
    5704 6u9h:Q (3.8) BS03 FAD 2.2.1.6 GO:0000287 ... P17597 32640464
    5705 6ui5:A (2.4) BS01 FAD ? GO:0000166 ... Q1MX79 N/A
    5706 6ui5:B (2.4) BS01 FAD ? GO:0000166 ... Q1MX79 N/A
    5707 6uzi:A (2.8) BS01 FAD 1.8.1.4 GO:0000166 ... A0A077ELH4 N/A
    5708 6uzi:B (2.8) BS02 FAD 1.8.1.4 GO:0000166 ... A0A077ELH4 N/A
    5709 6uzi:C (2.8) BS01 FAD 1.8.1.4 GO:0000166 ... A0A077ELH4 N/A
    5710 6uzi:D (2.8) BS02 FAD 1.8.1.4 GO:0000166 ... A0A077ELH4 N/A
    5711 6v42:A (1.45) BS01 FAD ? GO:0000166 ... A9D9D1 N/A
    5712 6v42:B (1.45) BS01 FAD ? GO:0000166 ... A9D9D1 N/A
    5713 6v43:A (1.77) BS02 FAD ? GO:0000166 ... A9D9D1 N/A
    5714 6v43:B (1.77) BS02 FAD ? GO:0000166 ... A9D9D1 N/A
    5715 6vax:A (2.59) BS01 FAD 1.3.5.1 GO:0005515 ... P31040 32887801
    5716 6vax:C (2.59) BS01 FAD 1.3.5.1 GO:0005515 ... P31040 32887801
    5717 6vjr:A (1.55) BS02 FAD 5.3.3.3 GO:0000166 ... A9A1Y2 N/A
    5718 6vjr:A (1.55) BS04 FAD 5.3.3.3 GO:0000166 ... A9A1Y2 N/A
    5719 6vjr:B (1.55) BS02 FAD 5.3.3.3 GO:0000166 ... A9A1Y2 N/A
    5720 6vjr:B (1.55) BS04 FAD 5.3.3.3 GO:0000166 ... A9A1Y2 N/A
    5721 6vjr:C (1.55) BS01 FAD 5.3.3.3 GO:0000166 ... A9A1Y2 N/A
    5722 6vjr:C (1.55) BS03 FAD 5.3.3.3 GO:0000166 ... A9A1Y2 N/A
    5723 6vjr:D (1.55) BS01 FAD 5.3.3.3 GO:0000166 ... A9A1Y2 N/A
    5724 6vjr:D (1.55) BS03 FAD 5.3.3.3 GO:0000166 ... A9A1Y2 N/A
    5725 6vyp:K (4.99) BS01 FAD 1.14.99.66 GO:0005634 ... O60341 32396821
    5726 6vyp:M (4.99) BS01 FAD 1.14.99.66 GO:0005634 ... O60341 32396821
    5727 6vyp:k (4.99) BS02 FAD 1.14.99.66 GO:0005634 ... O60341 32396821
    5728 6vyp:m (4.99) BS02 FAD 1.14.99.66 GO:0005634 ... O60341 32396821
    5729 6vz8:D (3.45) BS02 FAD 2.2.1.6 GO:0000287 ... P17597 32640464
    5730 6vz8:E (3.45) BS02 FAD 2.2.1.6 GO:0000287 ... P17597 32640464
    5731 6vz8:H (3.45) BS02 FAD 2.2.1.6 GO:0000287 ... P17597 32640464
    5732 6vz8:I (3.45) BS02 FAD 2.2.1.6 GO:0000287 ... P17597 32640464
    5733 6vz8:L (3.45) BS02 FAD 2.2.1.6 GO:0000287 ... P17597 32640464
    5734 6vz8:M (3.45) BS02 FAD 2.2.1.6 GO:0000287 ... P17597 32640464
    5735 6vz8:P (3.45) BS02 FAD 2.2.1.6 GO:0000287 ... P17597 32640464
    5736 6vz8:Q (3.45) BS02 FAD 2.2.1.6 GO:0000287 ... P17597 32640464
    5737 6vz9:A (1.52) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0000166 ... F7X6I3 32159324
    5738 6vz9:B (1.52) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0000166 ... F7X6I3 32159324
    5739 6w4k:A (2.93) BS02 FAD 1.14.99.66 GO:0016491 ... O60341 33034194
    5740 6wc6:A (3.1) BS02 FAD 1.14.99.66 GO:0005634 ... O60341 N/A
    5741 6wg9:A (2.55) BS01 FAD N/A GO:0004497 ... N/A 32415166
    5742 6wg9:B (2.55) BS01 FAD N/A GO:0004497 ... N/A 32415166
    5743 6wh6:A (2.25) BS01 FAD 1.8.5.8 GO:0005515 ... Q9Y6N5 32787249
    5744 6wh6:B (2.25) BS01 FAD 1.8.5.8 GO:0005515 ... Q9Y6N5 32787249
    5745 6wo1:A (3.3) BS01 FAD 2.2.1.6 GO:0000166 ... Q96VZ6 32640464
    5746 6wpu:A (2.084) BS01 FAD 1.-.-.- GO:0000166 ... A0A0M4U3V7 32527723
    5747 6wtb:A (2.58) BS02 FAD ? GO:0000166 ... O77059 33637846
    5748 6wtb:B (2.58) BS02 FAD ? GO:0000166 ... O77059 33637846
    5749 6wu6:A (3.6) BS01 FAD N/A GO:0006099 ... N/A 33408407
    5750 6wu6:E (3.6) BS01 FAD N/A GO:0006099 ... N/A 33408407
    5751 6wu6:I (3.6) BS01 FAD N/A GO:0006099 ... N/A 33408407
    5752 6wxr:A (3.2) BS01 FAD 1.6.3.1 GO:0004601 ... A2AQ92 32929281
    5753 6wxv:A (3.3) BS01 FAD 1.6.3.1 GO:0004601 ... A2AQ92 32929281
    5754 6wy8:A (2.1) BS01 FAD ? GO:0000166 ... D1AB76 33040522
    5755 6wy8:B (2.1) BS01 FAD ? GO:0000166 ... D1AB78 33040522
    5756 6wy8:C (2.1) BS01 FAD ? GO:0000166 ... D1AB76 33040522
    5757 6wy8:D (2.1) BS01 FAD ? GO:0000166 ... D1AB78 33040522
    5758 6x0h:A (2.087) BS01 FAD 1.14.13.196 GO:0000166 ... E9QYP0 32723870
    5759 6x0h:B (2.087) BS01 FAD 1.14.13.196 GO:0000166 ... E9QYP0 32723870
    5760 6x0h:C (2.087) BS01 FAD 1.14.13.196 GO:0000166 ... E9QYP0 32723870
    5761 6x0h:D (2.087) BS01 FAD 1.14.13.196 GO:0000166 ... E9QYP0 32723870
    5762 6x0i:A (1.95) BS01 FAD 1.14.13.196 GO:0000166 ... E9QYP0 32723870
    5763 6x0i:B (1.95) BS01 FAD 1.14.13.196 GO:0000166 ... E9QYP0 32723870
    5764 6x0i:C (1.95) BS01 FAD 1.14.13.196 GO:0000166 ... E9QYP0 32723870
    5765 6x0i:D (1.95) BS01 FAD 1.14.13.196 GO:0000166 ... E9QYP0 32723870
    5766 6x24:A (3.25) BS01 FAD ? GO:0009785 ... Q96524 33398020
    5767 6x24:B (3.25) BS01 FAD ? GO:0009785 ... Q96524 33398020
    5768 6x24:C (3.25) BS01 FAD ? GO:0009785 ... Q96524 33398020
    5769 6x24:D (3.25) BS01 FAD ? GO:0009785 ... Q96524 33398020
    5770 6x7u:A (2.7) BS01 FAD 3.6.1.62
    3.6.1.64
    GO:0000166 ... Q96DE0 32432673
    5771 6x7u:C (2.7) BS01 FAD 3.6.1.62
    3.6.1.64
    GO:0000166 ... Q96DE0 32432673
    5772 6x99:A (1.56) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0000166 ... F7X6I3 33333077
    5773 6x99:B (1.56) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0000166 ... F7X6I3 33333077
    5774 6x9a:A (1.41) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0000166 ... F7X6I3 33333077
    5775 6x9a:B (1.41) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0000166 ... F7X6I3 33333077
    5776 6x9b:A (1.46) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0000166 ... F7X6I3 33333077
    5777 6x9b:B (1.46) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0000166 ... F7X6I3 33333077
    5778 6x9d:A (1.54) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0000166 ... F7X6I3 33333077
    5779 6x9d:B (1.54) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0000166 ... F7X6I3 33333077
    5780 6xbb:A (2.366) BS01 FAD 1.14.13.59 GO:0000166 ... B5HNG5 33784308
    5781 6xbb:B (2.366) BS01 FAD 1.14.13.59 GO:0000166 ... B5HNG5 33784308
    5782 6xbb:C (2.366) BS01 FAD 1.14.13.59 GO:0000166 ... B5HNG5 33784308
    5783 6xbb:D (2.366) BS01 FAD 1.14.13.59 GO:0000166 ... B5HNG5 33784308
    5784 6xbb:E (2.366) BS01 FAD 1.14.13.59 GO:0000166 ... B5HNG5 33784308
    5785 6xbb:F (2.366) BS01 FAD 1.14.13.59 GO:0000166 ... B5HNG5 33784308
    5786 6xbb:G (2.366) BS01 FAD 1.14.13.59 GO:0000166 ... B5HNG5 33784308
    5787 6xbb:H (2.366) BS01 FAD 1.14.13.59 GO:0000166 ... B5HNG5 33784308
    5788 6xbc:A (2.863) BS01 FAD 1.14.13.59 GO:0000166 ... B5HNG5 33784308
    5789 6xbc:B (2.863) BS01 FAD 1.14.13.59 GO:0000166 ... B5HNG5 33784308
    5790 6xbc:C (2.863) BS01 FAD 1.14.13.59 GO:0000166 ... B5HNG5 33784308
    5791 6xbc:D (2.863) BS01 FAD 1.14.13.59 GO:0000166 ... B5HNG5 33784308
    5792 6xbc:E (2.863) BS01 FAD 1.14.13.59 GO:0000166 ... B5HNG5 33784308
    5793 6xbc:F (2.863) BS01 FAD 1.14.13.59 GO:0000166 ... B5HNG5 33784308
    5794 6xbc:G (2.863) BS01 FAD 1.14.13.59 GO:0000166 ... B5HNG5 33784308
    5795 6xbc:H (2.863) BS01 FAD 1.14.13.59 GO:0000166 ... B5HNG5 33784308
    5796 6xtf:A (2.23) BS01 FAD ? GO:0000166 ... Q7NMP6 33599267
    5797 6xtf:B (2.23) BS01 FAD ? GO:0000166 ... Q7NMP6 33599267
    5798 6xtf:D (2.23) BS01 FAD ? GO:0009055 ... Q7NFA3 33599267
    5799 6xut:A (1.6) BS01 FAD ? GO:0000166 ... A0A060SC37 34294139
    5800 6xuu:A (1.57) BS01 FAD ? GO:0000166 ... A0A060SC37 34294139

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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