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BioLiP
Download all results in tab-seperated text for 7191 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    4001 5adz:A (2.2) BS01 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    4002 5adz:B (2.2) BS01 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    4003 5adz:C (2.2) BS01 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    4004 5adz:D (2.2) BS01 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    4005 5ae1:A (2.1) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    4006 5ae1:B (2.1) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    4007 5ae1:C (2.1) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    4008 5ae1:D (2.1) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    4009 5ae2:A (2.0) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    4010 5ae2:B (2.0) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    4011 5ae2:C (2.0) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    4012 5ae2:D (2.0) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    4013 5ae3:A (2.18) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    4014 5ae3:B (2.18) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    4015 5ae3:C (2.18) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    4016 5ae3:D (2.18) BS02 FAD 2.5.1.26 GO:0003824 ... P97275 26322624
    4017 5af7:A (1.89) BS01 FAD 3.13.1.4 GO:0003995 ... K4L7X3 26057676
    4018 5af7:A (1.89) BS02 FAD 3.13.1.4 GO:0003995 ... K4L7X3 26057676
    4019 5af7:B (1.89) BS01 FAD 3.13.1.4 GO:0003995 ... K4L7X3 26057676
    4020 5af7:B (1.89) BS02 FAD 3.13.1.4 GO:0003995 ... K4L7X3 26057676
    4021 5ahk:A (1.55) BS02 FAD 2.2.1.6 GO:0000166 ... Q4K6F7 N/A
    4022 5ahk:B (1.55) BS03 FAD 2.2.1.6 GO:0000166 ... Q4K6F7 N/A
    4023 5ahs:A (2.3) BS01 FAD 3.13.1.4 GO:0003995 ... K4L7X3 26057676
    4024 5ahs:A (2.3) BS03 FAD 3.13.1.4 GO:0003995 ... K4L7X3 26057676
    4025 5ahs:B (2.3) BS01 FAD 3.13.1.4 GO:0003995 ... K4L7X3 26057676
    4026 5ahs:B (2.3) BS02 FAD 3.13.1.4 GO:0003995 ... K4L7X3 26057676
    4027 5ahs:C (2.3) BS01 FAD 3.13.1.4 GO:0003995 ... K4L7X3 26057676
    4028 5ahs:C (2.3) BS02 FAD 3.13.1.4 GO:0003995 ... K4L7X3 26057676
    4029 5ahs:C (2.3) BS03 FAD 3.13.1.4 GO:0003995 ... K4L7X3 26057676
    4030 5ahs:D (2.3) BS01 FAD 3.13.1.4 GO:0003995 ... K4L7X3 26057676
    4031 5ahs:E (2.3) BS01 FAD 3.13.1.4 GO:0003995 ... K4L7X3 26057676
    4032 5ahs:E (2.3) BS02 FAD 3.13.1.4 GO:0003995 ... K4L7X3 26057676
    4033 5ahs:F (2.3) BS01 FAD 3.13.1.4 GO:0003995 ... K4L7X3 26057676
    4034 5ahs:F (2.3) BS02 FAD 3.13.1.4 GO:0003995 ... K4L7X3 26057676
    4035 5awv:A (1.93) BS03 FAD ? GO:0000166 ... Q7WZ62 21478878
    4036 5awv:B (1.93) BS04 FAD ? GO:0000166 ... Q7WZ62 21478878
    4037 5awv:C (1.93) BS03 FAD ? GO:0000166 ... Q7WZ62 21478878
    4038 5awv:D (1.93) BS01 FAD ? GO:0000166 ... Q7WZ62 21478878
    4039 5br7:A (1.95) BS01 FAD 5.4.99.9 GO:0000166 ... Q6NER4 28608671
    4040 5brt:A (2.3) BS01 FAD ? GO:0000166 ... O06647 26275805
    4041 5brt:B (2.3) BS01 FAD ? GO:0000166 ... O06647 26275805
    4042 5buc:A (1.867) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    4043 5buc:B (1.867) BS04 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    4044 5buk:A (1.95) BS01 FAD ? GO:0000166 ... J7H1A1 27001835
    4045 5buk:B (1.95) BS01 FAD ? GO:0000166 ... J7H1A1 27001835
    4046 5bul:A (1.9784) BS01 FAD ? GO:0000166 ... A0A140UHM1 27001835
    4047 5bva:A (1.873) BS01 FAD ? GO:0000166 ... A0A140UHM3 27001835
    4048 5c2t:A (2.75) BS01 FAD 1.3.5.1 GO:0000166 ... Q33862 26198225
    4049 5c2t:E (2.75) BS01 FAD 1.3.5.1 GO:0000166 ... Q33862 26198225
    4050 5c3j:A (2.8) BS01 FAD 1.3.5.1 GO:0000166 ... Q33862 N/A
    4051 5c3j:E (2.8) BS01 FAD 1.3.5.1 GO:0000166 ... Q33862 N/A
    4052 5cho:A (2.37) BS01 FAD ? GO:0000166 ... M9QXS1 N/A
    4053 5cho:A (2.37) BS02 FAD ? GO:0000166 ... M9QXS1 N/A
    4054 5cho:B (2.37) BS01 FAD ? GO:0000166 ... M9QXS1 N/A
    4055 5cho:C (2.37) BS01 FAD ? GO:0000166 ... M9QXS1 N/A
    4056 5cho:C (2.37) BS02 FAD ? GO:0000166 ... M9QXS1 N/A
    4057 5cho:D (2.37) BS01 FAD ? GO:0000166 ... M9QXS1 N/A
    4058 5cho:D (2.37) BS02 FAD ? GO:0000166 ... M9QXS1 N/A
    4059 5cho:E (2.37) BS01 FAD ? GO:0000166 ... M9QXS1 N/A
    4060 5cho:F (2.37) BS01 FAD ? GO:0000166 ... M9QXS1 N/A
    4061 5cho:G (2.37) BS01 FAD ? GO:0000166 ... M9QXS1 N/A
    4062 5cho:H (2.37) BS01 FAD ? GO:0000166 ... M9QXS1 N/A
    4063 5chp:A (1.7) BS01 FAD 2.1.1.148 GO:0004799 ... Q9WYT0 N/A
    4064 5cku:A (2.1) BS01 FAD 1.14.13.196 GO:0000166 ... E9QYP0 26375201
    4065 5d79:A (1.849) BS02 FAD 1.1.1.- GO:0016491 ... Q9FI21 27276217
    4066 5d79:B (1.849) BS02 FAD 1.1.1.- GO:0016491 ... Q9FI21 27276217
    4067 5dbj:A (2.75) BS01 FAD 1.14.19.56 GO:0000166 ... Q4KCZ0 26416533
    4068 5dbj:B (2.75) BS01 FAD 1.14.19.56 GO:0000166 ... Q4KCZ0 26416533
    4069 5dbj:C (2.75) BS01 FAD 1.14.19.56 GO:0000166 ... Q4KCZ0 26416533
    4070 5dbj:D (2.75) BS01 FAD 1.14.19.56 GO:0000166 ... Q4KCZ0 26416533
    4071 5dbj:E (2.75) BS01 FAD 1.14.19.56 GO:0000166 ... Q4KCZ0 26416533
    4072 5dqr:A (2.7) BS03 FAD 1.17.7.2 GO:0003824 ... Q8GS60 27072131
    4073 5dqr:B (2.7) BS03 FAD 1.17.7.2 GO:0003824 ... Q8GS60 27072131
    4074 5dqr:C (2.7) BS03 FAD 1.17.7.2 GO:0003824 ... Q8GS60 27072131
    4075 5dqr:D (2.7) BS03 FAD 1.17.7.2 GO:0003824 ... Q8GS60 27072131
    4076 5dqr:E (2.7) BS03 FAD 1.17.7.2 GO:0003824 ... Q8GS60 27072131
    4077 5dqr:F (2.7) BS03 FAD 1.17.7.2 GO:0003824 ... Q8GS60 27072131
    4078 5ea2:A (2.01) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4079 5ea2:A (2.01) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4080 5ea2:C (2.01) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4081 5ea2:E (2.01) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4082 5ea2:G (2.01) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4083 5ea2:G (2.01) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4084 5eai:A (2.9) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4085 5eai:A (2.9) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4086 5eai:B (2.9) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4087 5eai:B (2.9) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4088 5eai:C (2.9) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4089 5eai:C (2.9) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4090 5eai:D (2.9) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4091 5eai:E (2.9) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4092 5eai:E (2.9) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4093 5eai:F (2.9) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4094 5eai:F (2.9) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4095 5eai:G (2.9) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4096 5eai:H (2.9) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4097 5eai:I (2.9) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4098 5eai:I (2.9) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4099 5eai:J (2.9) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4100 5eai:K (2.9) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4101 5eai:L (2.9) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4102 5eai:M (2.9) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4103 5eai:M (2.9) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4104 5eai:N (2.9) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4105 5eai:N (2.9) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 26822308
    4106 5eb4:A (2.3) BS01 FAD 4.1.2.10 GO:0016491 ... O24243 27067080
    4107 5eb4:B (2.3) BS01 FAD 4.1.2.10 GO:0016491 ... O24243 27067080
    4108 5eb5:A (2.8) BS01 FAD 4.1.2.10 GO:0016491 ... O24243 27067080
    4109 5eb5:B (2.8) BS01 FAD 4.1.2.10 GO:0016491 ... O24243 27067080
    4110 5ebk:A (3.51) BS01 FAD 1.8.1.12 GO:0000166 ... A4HSF7 28098499
    4111 5ebk:B (3.51) BS03 FAD 1.8.1.12 GO:0000166 ... A4HSF7 28098499
    4112 5emn:A (2.2) BS02 FAD 1.6.2.4 GO:0003958 ... P16435 27496950
    4113 5emn:B (2.2) BS02 FAD 1.6.2.4 GO:0003958 ... P16435 27496950
    4114 5eow:A (2.1) BS01 FAD 1.14.13.114 GO:0071949 ... Q88FY2 27218267
    4115 5epg:A (3.39) BS03 FAD 1.17.3.-
    1.2.3.1
    GO:0004031 ... Q06278 26842593
    4116 5eqd:A (1.83) BS01 FAD 5.4.99.9 GO:0000166 ... A0R629 N/A
    4117 5eqd:B (1.83) BS02 FAD 5.4.99.9 GO:0000166 ... A0R629 N/A
    4118 5eqf:A (2.145) BS02 FAD 5.4.99.9 GO:0000166 ... Q6NER4 28608671
    4119 5eqf:B (2.145) BS02 FAD 5.4.99.9 GO:0000166 ... Q6NER4 28608671
    4120 5er0:A (2.406) BS01 FAD ? GO:0000166 ... Q03Q85 27124460
    4121 5er0:B (2.406) BS01 FAD ? GO:0000166 ... Q03Q85 27124460
    4122 5er0:C (2.406) BS01 FAD ? GO:0000166 ... Q03Q85 27124460
    4123 5er0:D (2.406) BS01 FAD ? GO:0000166 ... Q03Q85 27124460
    4124 5er9:A (1.689) BS02 FAD 5.4.99.9 GO:0000166 ... A0R629 N/A
    4125 5er9:B (1.689) BS02 FAD 5.4.99.9 GO:0000166 ... A0R629 N/A
    4126 5evy:X (2.47) BS01 FAD 1.14.13.1 GO:0000166 ... Q59713 26616054
    4127 5ez3:A (2.15) BS01 FAD 1.3.8.- GO:0000166 ... Q8YC61 N/A
    4128 5ez3:A (2.15) BS02 FAD 1.3.8.- GO:0000166 ... Q8YC61 N/A
    4129 5ez3:B (2.15) BS01 FAD 1.3.8.- GO:0000166 ... Q8YC61 N/A
    4130 5ez3:B (2.15) BS02 FAD 1.3.8.- GO:0000166 ... Q8YC61 N/A
    4131 5ez3:C (2.15) BS01 FAD 1.3.8.- GO:0000166 ... Q8YC61 N/A
    4132 5ez3:C (2.15) BS02 FAD 1.3.8.- GO:0000166 ... Q8YC61 N/A
    4133 5ez3:D (2.15) BS01 FAD 1.3.8.- GO:0000166 ... Q8YC61 N/A
    4134 5ez3:D (2.15) BS02 FAD 1.3.8.- GO:0000166 ... Q8YC61 N/A
    4135 5ez7:A (2.4) BS01 FAD 1.-.-.- GO:0005737 ... Q9HUH4 26841760
    4136 5f3r:A (2.04) BS01 FAD 5.4.99.9 GO:0000166 ... A0R629 N/A
    4137 5fa6:A (2.3) BS02 FAD 1.6.2.4 GO:0003958 ... P16435 27496950
    4138 5fa6:B (2.3) BS02 FAD 1.6.2.4 GO:0003958 ... P16435 27496950
    4139 5fem:A (2.168) BS02 FAD 2.2.1.6 GO:0000287 ... P07342 26924714
    4140 5fem:B (2.168) BS03 FAD 2.2.1.6 GO:0000287 ... P07342 26924714
    4141 5fjm:A (2.0) BS01 FAD ? GO:0000166 ... A0A158RFS7 27022028
    4142 5fjm:B (2.0) BS01 FAD ? GO:0000166 ... A0A158RFS7 27022028
    4143 5fjn:A (1.75) BS01 FAD ? GO:0000166 ... A0A158RFS7 27022028
    4144 5fjn:B (1.75) BS01 FAD ? GO:0000166 ... A0A158RFS7 27022028
    4145 5fmh:A (1.8) BS01 FAD 1.6.99.- GO:0016491 ... O95831 N/A
    4146 5fn0:A (3.19) BS01 FAD 1.14.13.9 GO:0003824 ... Q84HF5 26752518
    4147 5fn0:B (3.19) BS01 FAD 1.14.13.9 GO:0003824 ... Q84HF5 26752518
    4148 5fn0:C (3.19) BS01 FAD 1.14.13.9 GO:0003824 ... Q84HF5 26752518
    4149 5fn0:D (3.19) BS01 FAD 1.14.13.9 GO:0003824 ... Q84HF5 26752518
    4150 5fs6:A (1.9) BS01 FAD 1.6.99.- GO:0016491 ... O95831 27178839
    4151 5fs6:B (1.9) BS01 FAD 1.6.99.- GO:0016491 ... O95831 27178839
    4152 5fs7:A (1.85) BS01 FAD 1.6.99.- GO:0016491 ... O95831 27178839
    4153 5fs7:B (1.85) BS01 FAD 1.6.99.- GO:0016491 ... O95831 27178839
    4154 5fs8:A (1.4) BS01 FAD 1.6.99.- GO:0016491 ... O95831 27178839
    4155 5fs9:A (1.75) BS01 FAD 1.6.99.- GO:0016491 ... O95831 27178839
    4156 5fs9:B (1.75) BS01 FAD 1.6.99.- GO:0016491 ... O95831 27178839
    4157 5fuq:A (2.04) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 28911204
    4158 5fuq:B (2.04) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 28911204
    4159 5fxd:A (1.7) BS01 FAD 1.1.3.38 GO:0000166 ... Q0SBK1 27123962
    4160 5fxd:B (1.7) BS01 FAD 1.1.3.38 GO:0000166 ... Q0SBK1 27123962
    4161 5fxe:A (1.9) BS01 FAD 1.1.3.38 GO:0000166 ... Q0SBK1 27123962
    4162 5fxe:B (1.9) BS01 FAD 1.1.3.38 GO:0000166 ... Q0SBK1 27123962
    4163 5fxf:A (1.9) BS01 FAD 1.1.3.38 GO:0000166 ... Q0SBK1 27123962
    4164 5fxf:B (1.9) BS01 FAD 1.1.3.38 GO:0000166 ... Q0SBK1 27123962
    4165 5fxp:A (2.6) BS01 FAD 1.1.3.38 GO:0000166 ... Q0SBK1 27123962
    4166 5fxp:B (2.6) BS01 FAD 1.1.3.38 GO:0000166 ... Q0SBK1 27123962
    4167 5g5g:B (1.7) BS02 FAD 1.2.99.6 GO:0005515 ... P77324 27622978
    4168 5g5h:B (2.3) BS02 FAD 1.2.99.6 GO:0005515 ... P77324 27622978
    4169 5glg:A (1.8) BS01 FAD 1.3.1.6 GO:0005739 ... P21375 30451826
    4170 5grt:A (2.4) BS01 FAD 1.8.1.7 GO:0004362 ... P00390 9174360
    4171 5gsn:A (2.203) BS02 FAD 1.14.13.148 GO:0004497 ... A3SLM3 27997715
    4172 5gsn:B (2.203) BS02 FAD 1.14.13.148 GO:0004497 ... A3SLM3 27997715
    4173 5gsn:C (2.203) BS02 FAD 1.14.13.148 GO:0004497 ... A3SLM3 27997715
    4174 5gsn:D (2.203) BS02 FAD 1.14.13.148 GO:0004497 ... A3SLM3 27997715
    4175 5gv7:A (0.8) BS01 FAD 1.6.2.2 GO:0004128 ... P83686 28225078
    4176 5gv8:A (0.78) BS01 FAD 1.6.2.2 GO:0004128 ... P83686 28225078
    4177 5gxu:A (2.3) BS02 FAD 1.6.2.4 GO:0003958 ... Q9SUM3 28103421
    4178 5gxu:B (2.3) BS01 FAD 1.6.2.4 GO:0003958 ... Q9SUM3 28103421
    4179 5h59:A (1.65) BS01 FAD 1.18.1.2 GO:0016491 ... B4G043 28093652
    4180 5h5j:A (2.5) BS01 FAD 1.18.1.2 GO:0016491 ... B4G043 28093652
    4181 5h5j:C (2.5) BS01 FAD 1.18.1.2 GO:0016491 ... B4G043 28093652
    4182 5h6q:A (2.53) BS02 FAD 1.14.99.66 GO:0005634 ... O60341 28336409
    4183 5h6r:A (2.6) BS02 FAD 1.14.99.66 GO:0005634 ... O60341 28336409
    4184 5h75:A (2.738) BS01 FAD 4.1.1.- GO:0003824 ... P38507
    Q9RC23
    28572639
    4185 5h75:A (2.738) BS02 FAD 4.1.1.- GO:0003824 ... P38507
    Q9RC23
    28572639
    4186 5h75:B (2.738) BS01 FAD 4.1.1.- GO:0003824 ... P38507
    Q9RC23
    28572639
    4187 5h75:B (2.738) BS02 FAD 4.1.1.- GO:0003824 ... P38507
    Q9RC23
    28572639
    4188 5h75:C (2.738) BS01 FAD 4.1.1.- GO:0003824 ... P38507
    Q9RC23
    28572639
    4189 5h75:D (2.738) BS01 FAD 4.1.1.- GO:0003824 ... P38507
    Q9RC23
    28572639
    4190 5hhz:A (2.0) BS01 FAD 1.5.99.12 GO:0000166 ... E3T1W8 27095406
    4191 5hmr:A (2.0) BS01 FAD 1.5.99.12 GO:0000166 ... E3T1W8 27422623
    4192 5hqx:A (2.05) BS01 FAD 1.5.99.12 GO:0000166 ... E3T1W8 27422623
    4193 5hxi:A (1.5) BS01 FAD ? GO:0000166 ... Q988D3 27568368
    4194 5hxw:A (2.63) BS01 FAD 1.4.3.2 GO:0000166 ... Q9LCB2 27422658
    4195 5hxw:B (2.63) BS01 FAD 1.4.3.2 GO:0000166 ... Q9LCB2 27422658
    4196 5hxw:C (2.63) BS01 FAD 1.4.3.2 GO:0000166 ... Q9LCB2 27422658
    4197 5hxw:D (2.63) BS01 FAD 1.4.3.2 GO:0000166 ... Q9LCB2 27422658
    4198 5hxw:E (2.63) BS01 FAD 1.4.3.2 GO:0000166 ... Q9LCB2 27422658
    4199 5hxw:F (2.63) BS01 FAD 1.4.3.2 GO:0000166 ... Q9LCB2 27422658
    4200 5hy5:A (2.68) BS01 FAD 1.14.19.59 GO:0000166 ... E9P162 26840773

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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