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BioLiP
Download all results in tab-seperated text for 7191 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 1a8p:A (2.0) BS01 FAD 1.18.1.2 GO:0000166 ... Q44532 9865948
    2 1ahv:A (3.1) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 9261083
    3 1ahv:B (3.1) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 9261083
    4 1ahz:A (3.3) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 9261083
    5 1ahz:B (3.3) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 9261083
    6 1amo:A (2.6) BS01 FAD 1.6.2.4 GO:0003420 ... P00388 9237990
    7 1amo:B (2.6) BS01 FAD 1.6.2.4 GO:0003420 ... P00388 9237990
    8 1an9:A (2.5) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 9399588
    9 1an9:B (2.5) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 9399588
    10 1aog:A (2.3) BS01 FAD 1.8.1.12 GO:0004362 ... P28593 8771196
    11 1aog:B (2.3) BS01 FAD 1.8.1.12 GO:0004362 ... P28593 8771196
    12 1b2r:A (1.8) BS01 FAD 1.18.1.2 GO:0016491 ... P21890 10651039
    13 1b37:A (1.9) BS01 FAD 1.5.3.14
    1.5.3.15    		 GO:0006598 ... O64411 10368296
    14 1b37:B (1.9) BS01 FAD 1.5.3.14
    1.5.3.15    		 GO:0006598 ... O64411 10368296
    15 1b37:C (1.9) BS01 FAD 1.5.3.14
    1.5.3.15    		 GO:0006598 ... O64411 10368296
    16 1b4v:A (1.5) BS01 FAD 1.1.3.6
    5.3.3.1    		 GO:0004769 ... P12676 10194345
    17 1b5q:A (1.9) BS01 FAD 1.5.3.14
    1.5.3.15    		 GO:0006598 ... O64411 10368296
    18 1b5q:B (1.9) BS01 FAD 1.5.3.14
    1.5.3.15    		 GO:0006598 ... O64411 10368296
    19 1b5q:C (1.9) BS01 FAD 1.5.3.14
    1.5.3.15    		 GO:0006598 ... O64411 10368296
    20 1b5t:A (2.5) BS01 FAD 1.5.1.54 GO:0004489 ... P0AEZ1 10201405
    21 1b5t:B (2.5) BS01 FAD 1.5.1.54 GO:0004489 ... P0AEZ1 10201405
    22 1b5t:C (2.5) BS01 FAD 1.5.1.54 GO:0004489 ... P0AEZ1 10201405
    23 1b8s:A (1.65) BS01 FAD 1.1.3.6
    5.3.3.1    		 GO:0004769 ... P12676 10194345
    24 1bf3:A (2.2) BS01 FAD 1.14.13.2 GO:0004497 ... P00438 9578477
    25 1bgj:A (3.0) BS01 FAD 1.14.13.2 GO:0004497 ... P00438 9694855
    26 1bgn:A (2.0) BS01 FAD 1.14.13.2 GO:0004497 ... P00438 9694855
    27 1bhy:A (4.18) BS01 FAD 1.8.1.4 GO:0004148 ... Q51225 10089406
    28 1bjk:A (2.3) BS01 FAD 1.18.1.2 GO:0016491 ... P21890 9922134
    29 1bkw:A (2.2) BS01 FAD 1.14.13.2 GO:0004497 ... P00438 7628466
    30 1bqe:A (2.45) BS01 FAD 1.18.1.2 GO:0016491 ... P21890 11152461
    31 1buc:A (2.5) BS02 FAD 1.3.8.1 GO:0003995 ... Q06319 7857927
    32 1buc:B (2.5) BS02 FAD 1.3.8.1 GO:0003995 ... Q06319 7857927
    33 1bwc:A (2.1) BS01 FAD 1.8.1.7 GO:0004362 ... P00390 9986706
    34 1bx0:A (1.9) BS01 FAD 1.18.1.2 GO:0016491 ... P00455 9852055
    35 1bx1:A (1.9) BS01 FAD 1.18.1.2 GO:0016491 ... P00455 9852055
    36 1bzl:A (2.4) BS01 FAD 1.8.1.12 GO:0004362 ... P28593 10368274
    37 1bzl:B (2.4) BS03 FAD 1.8.1.12 GO:0004362 ... P28593 10368274
    38 1c0i:A (1.9) BS01 FAD 1.4.3.3 GO:0003884 ... P80324 12445787
    39 1c0k:A (1.46) BS01 FAD 1.4.3.3 GO:0003884 ... P80324 11070076
    40 1c0l:A (1.73) BS02 FAD 1.4.3.3 GO:0003884 ... P80324 11070076
    41 1c0p:A (1.2) BS01 FAD 1.4.3.3 GO:0003884 ... P80324 11070076
    42 1cbo:A (1.8) BS01 FAD 1.1.3.6
    5.3.3.1    		 GO:0004769 ... P12676 10194345
    43 1cc2:A (2.2) BS01 FAD 1.1.3.6
    5.3.3.1    		 GO:0004769 ... P12676 10194345
    44 1cc4:A (2.0) BS01 FAD 1.14.13.2 GO:0004497 ... P00438 10025942
    45 1cc6:A (2.2) BS01 FAD 1.14.13.2 GO:0004497 ... P00438 10025942
    46 1cf3:A (1.9) BS01 FAD 1.1.3.4 GO:0005576 ... P13006 10216293
    47 1cj2:A (2.8) BS01 FAD 1.14.13.2 GO:0004497 ... P00438 10493859
    48 1cj3:A (2.5) BS01 FAD 1.14.13.2 GO:0004497 ... P00438 10493859
    49 1cj4:A (2.4) BS01 FAD 1.14.13.2 GO:0004497 ... P00438 10493859
    50 1cjc:A (1.7) BS01 FAD 1.18.1.6 GO:0005515 ... P08165 10369776
    51 1cl0:A (2.5) BS01 FAD 1.8.1.9 GO:0004791 ... P0A9P4 10595539
    52 1cne:A (3.0) BS01 FAD 1.7.1.1 GO:0016491 ... P17571 7760334
    53 1cnf:A (2.7) BS01 FAD 1.7.1.1 GO:0016491 ... P17571 7760334
    54 1coy:A (1.8) BS02 FAD 1.1.3.6
    5.3.3.1    		 GO:0004769 ... P22637 8218217
    55 1cqx:A (1.75) BS02 FAD 1.14.12.17 GO:0005344 ... P39662 8557026
    56 1cqx:B (1.75) BS02 FAD 1.14.12.17 GO:0005344 ... P39662 8557026
    57 1d4a:A (1.7) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    58 1d4a:A (1.7) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    59 1d4a:B (1.7) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    60 1d4a:B (1.7) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    61 1d4a:C (1.7) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    62 1d4a:D (1.7) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    63 1d4a:D (1.7) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    64 1d4c:A (2.9) BS05 FAD 1.3.2.4 GO:0010181 ... P83223 10581551
    65 1d4c:B (2.9) BS05 FAD 1.3.2.4 GO:0010181 ... P83223 10581551
    66 1d4c:C (2.9) BS06 FAD 1.3.2.4 GO:0010181 ... P83223 10581551
    67 1d4c:D (2.9) BS05 FAD 1.3.2.4 GO:0010181 ... P83223 10581551
    68 1d4d:A (2.5) BS05 FAD 1.3.2.4 GO:0010181 ... P83223 10581551
    69 1d4e:A (2.8) BS05 FAD 1.3.2.4 GO:0010181 ... P83223 10581551
    70 1d7y:A (2.1) BS01 FAD ? GO:0000166 ... Q52437 11090282
    71 1ddg:A (2.01) BS01 FAD 1.8.1.2 GO:0016491 ... P38038 10860732
    72 1ddg:B (2.01) BS01 FAD 1.8.1.2 GO:0016491 ... P38038 10860732
    73 1ddi:A (2.51) BS01 FAD 1.8.1.2 GO:0016491 ... P38038 10860732
    74 1ddo:A (3.1) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 9153426
    75 1ddo:B (3.1) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 9153426
    76 1ddo:C (3.1) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 9153426
    77 1ddo:D (3.1) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 9153426
    78 1ddo:E (3.1) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 9153426
    79 1ddo:F (3.1) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 9153426
    80 1ddo:G (3.1) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 9153426
    81 1ddo:H (3.1) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 9153426
    82 1dii:A (2.5) BS01 FAD 1.17.9.1 GO:0003824 ... P09788 10623531
    83 1dii:B (2.5) BS01 FAD 1.17.9.1 GO:0003824 ... P09788 10623531
    84 1diq:A (2.75) BS01 FAD 1.17.9.1 GO:0003824 ... P09788 10623531
    85 1diq:B (2.75) BS01 FAD 1.17.9.1 GO:0003824 ... P09788 10623531
    86 1dnc:A (1.7) BS01 FAD 1.8.1.7 GO:0004362 ... P00390 9546215
    87 1dnp:A (2.3) BS01 FAD 4.1.99.3 GO:0000166 ... P00914 7604260
    88 1dnp:B (2.3) BS01 FAD 4.1.99.3 GO:0000166 ... P00914 7604260
    89 1dob:A (2.0) BS01 FAD 1.14.13.2 GO:0004497 ... P20586 7939628
    90 1doc:A (2.0) BS01 FAD 1.14.13.2 GO:0004497 ... P20586 7939628
    91 1dod:A (2.1) BS01 FAD 1.14.13.2 GO:0004497 ... P20586 7939628
    92 1doe:A (2.3) BS01 FAD 1.14.13.2 GO:0004497 ... P20586 7939628
    93 1dxl:A (3.15) BS01 FAD 1.8.1.4 GO:0004148 ... P31023 10806386
    94 1dxl:B (3.15) BS01 FAD 1.8.1.4 GO:0004148 ... P31023 10806386
    95 1dxl:C (3.15) BS01 FAD 1.8.1.4 GO:0004148 ... P31023 10806386
    96 1dxl:D (3.15) BS01 FAD 1.8.1.4 GO:0004148 ... P31023 10806386
    97 1dxo:A (2.5) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    98 1dxo:A (2.5) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    99 1dxo:B (2.5) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    100 1dxo:B (2.5) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    101 1dxo:C (2.5) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    102 1dxo:D (2.5) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    103 1dxo:D (2.5) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    104 1dxq:A (2.8) BS01 FAD 1.6.5.2 GO:0000209 ... Q64669 10706635
    105 1dxq:A (2.8) BS02 FAD 1.6.5.2 GO:0000209 ... Q64669 10706635
    106 1dxq:B (2.8) BS01 FAD 1.6.5.2 GO:0000209 ... Q64669 10706635
    107 1dxq:B (2.8) BS02 FAD 1.6.5.2 GO:0000209 ... Q64669 10706635
    108 1dxq:C (2.8) BS01 FAD 1.6.5.2 GO:0000209 ... Q64669 10706635
    109 1dxq:C (2.8) BS02 FAD 1.6.5.2 GO:0000209 ... Q64669 10706635
    110 1dxq:D (2.8) BS01 FAD 1.6.5.2 GO:0000209 ... Q64669 10706635
    111 1dxq:D (2.8) BS02 FAD 1.6.5.2 GO:0000209 ... Q64669 10706635
    112 1dzn:A (2.8) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10809721
    113 1dzn:B (2.8) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10809721
    114 1e0y:A (2.75) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10920192
    115 1e0y:B (2.75) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10920192
    116 1e1k:A (1.95) BS01 FAD 1.18.1.6 GO:0005515 ... P08165 10998235
    117 1e1l:A (2.3) BS01 FAD 1.18.1.6 GO:0005515 ... P08165 10998235
    118 1e1m:A (1.85) BS01 FAD 1.18.1.6 GO:0005515 ... P08165 10998235
    119 1e1n:A (2.4) BS01 FAD 1.18.1.6 GO:0005515 ... P08165 10998235
    120 1e39:A (1.8) BS05 FAD 1.3.2.4 GO:0008202 ... P0C278 10978153
    121 1e62:A (2.3) BS01 FAD 1.18.1.2 GO:0016491 ... P21890 15789405
    122 1e63:A (2.3) BS01 FAD 1.18.1.2 GO:0016491 ... P21890 15789405
    123 1e64:A (2.3) BS01 FAD 1.18.1.2 GO:0016491 ... P21890 15789405
    124 1e6e:A (2.3) BS01 FAD 1.18.1.6 GO:0005515 ... P08165 11053423
    125 1e6e:C (2.3) BS01 FAD 1.18.1.6 GO:0005515 ... P08165 11053423
    126 1e7p:A (3.1) BS01 FAD 1.3.5.1 GO:0000104 ... P17412 11248702
    127 1e7p:D (3.1) BS01 FAD 1.3.5.1 GO:0000104 ... P17412 11248702
    128 1e7p:G (3.1) BS01 FAD 1.3.5.1 GO:0000104 ... P17412 11248702
    129 1e7p:J (3.1) BS01 FAD 1.3.5.1 GO:0000104 ... P17412 11248702
    130 1e8g:A (2.1) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10984479 MOAD: Kd=1.8uM
    131 1e8g:B (2.1) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10984479 MOAD: Kd=1.8uM
    132 1ebd:A (2.6) BS01 FAD 1.8.1.4 GO:0004148 ... P11959 8805537
    133 1ebd:B (2.6) BS01 FAD 1.8.1.4 GO:0004148 ... P11959 8805537
    134 1efp:A (2.6) BS01 FAD ? GO:0009055 ... P38974 10026281
    135 1efp:B (2.6) BS01 FAD ? GO:0009055 ... P38975 10026281
    136 1efp:C (2.6) BS01 FAD ? GO:0009055 ... P38974 10026281
    137 1efp:D (2.6) BS01 FAD ? GO:0009055 ... P38975 10026281
    138 1efv:A (2.1) BS01 FAD ? GO:0005515 ... P13804 8962055
    139 1egc:A (2.6) BS02 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    140 1egc:A (2.6) BS03 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    141 1egc:B (2.6) BS01 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    142 1egc:B (2.6) BS03 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    143 1egc:C (2.6) BS02 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    144 1egc:C (2.6) BS03 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    145 1egc:D (2.6) BS01 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    146 1egc:D (2.6) BS03 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    147 1egd:A (2.4) BS01 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    148 1egd:A (2.4) BS02 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    149 1egd:B (2.4) BS01 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    150 1egd:B (2.4) BS02 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    151 1egd:C (2.4) BS01 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    152 1egd:C (2.4) BS02 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    153 1egd:D (2.4) BS01 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    154 1egd:D (2.4) BS02 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    155 1ege:A (2.75) BS01 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    156 1ege:A (2.75) BS02 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    157 1ege:B (2.75) BS01 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    158 1ege:B (2.75) BS02 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    159 1ege:C (2.75) BS01 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    160 1ege:C (2.75) BS02 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    161 1ege:D (2.75) BS01 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    162 1ege:D (2.75) BS02 FAD 1.3.8.7 GO:0001889 ... P11310 8823176
    163 1el5:A (1.8) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 10913292
    164 1el5:B (1.8) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 10913292
    165 1el7:A (1.9) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 10913292
    166 1el7:B (1.9) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 10913292
    167 1el8:A (1.9) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 10913292
    168 1el8:B (1.9) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 10913292
    169 1el9:A (2.0) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 10913292
    170 1el9:B (2.0) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 10913292
    171 1eli:A (2.0) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 10913292
    172 1eli:B (2.0) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 10913292
    173 1ep1:B (2.2) BS01 FAD 1.3.3.1 GO:0005515 ... P56968 11188687
    174 1ep2:B (2.4) BS01 FAD 1.3.3.1 GO:0005515 ... P56968 11188687
    175 1ep3:B (2.1) BS01 FAD 1.3.3.1 GO:0005515 ... P56968 11188687
    176 1evi:A (2.5) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 10876160
    177 1evi:B (2.5) BS01 FAD 1.4.3.3 GO:0003884 ... P00371 10876160
    178 1ewy:A (2.38) BS01 FAD 1.18.1.2 GO:0016491 ... P21890 11053838
    179 1ewy:B (2.38) BS01 FAD 1.18.1.2 GO:0016491 ... P21890 11053838
    180 1ewy:C (2.38) BS01 FAD ? GO:0005515 ... P0A3C8 11053838
    181 1f0x:A (1.9) BS01 FAD 1.1.5.12 GO:0003824 ... P06149 10944213
    182 1f0x:B (1.9) BS01 FAD 1.1.5.12 GO:0003824 ... P06149 10944213
    183 1f20:A (1.9) BS01 FAD 1.14.13.39 GO:0016491 ... P29476 11473123
    184 1f3p:A (2.4) BS01 FAD 1.14.-.- GO:0000166 ... Q52437 11090282
    185 1f6m:A (2.95) BS01 FAD 1.8.1.9 GO:0004791 ... P0A9P4 10947986
    186 1f6m:B (2.95) BS01 FAD 1.8.1.9 GO:0004791 ... P0A9P4 10947986
    187 1f6m:E (2.95) BS01 FAD 1.8.1.9 GO:0004791 ... P0A9P4 10947986
    188 1f6m:F (2.95) BS01 FAD 1.8.1.9 GO:0004791 ... P0A9P4 10947986
    189 1f8r:A (2.0) BS01 FAD 1.4.3.2 GO:0001716 ... P81382 10944103
    190 1f8r:B (2.0) BS01 FAD 1.4.3.2 GO:0001716 ... P81382 10944103
    191 1f8r:C (2.0) BS01 FAD 1.4.3.2 GO:0001716 ... P81382 10944103
    192 1f8r:D (2.0) BS01 FAD 1.4.3.2 GO:0001716 ... P81382 10944103
    193 1f8s:A (2.0) BS04 FAD 1.4.3.2 GO:0001716 ... P81382 10944103
    194 1f8s:B (2.0) BS04 FAD 1.4.3.2 GO:0001716 ... P81382 10944103
    195 1f8s:C (2.0) BS04 FAD 1.4.3.2 GO:0001716 ... P81382 10944103
    196 1f8s:D (2.0) BS04 FAD 1.4.3.2 GO:0001716 ... P81382 10944103
    197 1f8s:E (2.0) BS04 FAD 1.4.3.2 GO:0001716 ... P81382 10944103
    198 1f8s:F (2.0) BS04 FAD 1.4.3.2 GO:0001716 ... P81382 10944103
    199 1f8s:G (2.0) BS04 FAD 1.4.3.2 GO:0001716 ... P81382 10944103
    200 1f8s:H (2.0) BS04 FAD 1.4.3.2 GO:0001716 ... P81382 10944103
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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