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BioLiP
Download all results in tab-seperated text for 224 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    201 6kih:I (3.0) BS02 F6P ? GO:0000166 ... Q8DIJ5 32528448
    202 6kih:K (3.0) BS02 F6P ? GO:0000166 ... Q8DIJ5 32528448
    203 6kih:L (3.0) BS02 F6P ? GO:0000166 ... Q8DIJ5 32528448
    204 6xio:A (3.12) BS02 F6P N/A GO:0000287 ... N/A 33839685
    205 7kmf:G (2.91) BS01 F6P ? GO:0002183 ... Q14232 34103529
    206 7kmf:H (2.91) BS01 F6P ? GO:0002183 ... Q14232 34103529
    207 7lw1:A (2.9) BS03 F6P 2.7.1.11 GO:0003872 ... P17858 34320407
    208 7lw1:A (2.9) BS06 F6P 2.7.1.11 GO:0003872 ... P17858 34320407
    209 7lw1:D (2.9) BS02 F6P 2.7.1.11 GO:0003872 ... P17858 34320407
    210 7lw1:D (2.9) BS05 F6P 2.7.1.11 GO:0003872 ... P17858 34320407
    211 7lw1:E (2.9) BS03 F6P 2.7.1.11 GO:0003872 ... P17858 34320407
    212 7lw1:E (2.9) BS06 F6P 2.7.1.11 GO:0003872 ... P17858 34320407
    213 7lw1:F (2.9) BS02 F6P 2.7.1.11 GO:0003872 ... P17858 34320407
    214 7lw1:F (2.9) BS05 F6P 2.7.1.11 GO:0003872 ... P17858 34320407
    215 7txa:1 (2.4) BS01 F6P 3.1.3.11 GO:0005829 ... Q5NEJ8 37352301
    216 7txa:C (2.4) BS01 F6P 3.1.3.11 GO:0005829 ... Q5NEJ8 37352301
    217 8w2g:A (3.0) BS01 F6P N/A N/A P17858 39183237
    218 8w2g:A (3.0) BS06 F6P N/A N/A P17858 39183237
    219 8w2g:B (3.0) BS01 F6P N/A N/A P17858 39183237
    220 8w2g:B (3.0) BS03 F6P N/A N/A P17858 39183237
    221 8w2g:C (3.0) BS01 F6P N/A N/A P17858 39183237
    222 8w2g:C (3.0) BS02 F6P N/A N/A P17858 39183237
    223 8w2g:D (3.0) BS01 F6P N/A N/A P17858 39183237
    224 8w2g:D (3.0) BS06 F6P N/A N/A P17858 39183237
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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