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BioLiP
Download all results in tab-seperated text for 30 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 1ca7:A (2.5) BS01 ENO 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 10353846
    2 1ca7:A (2.5) BS02 ENO 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 10353846
    3 1ca7:B (2.5) BS01 ENO 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 10353846
    4 1ca7:B (2.5) BS02 ENO 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 10353846
    5 1ca7:C (2.5) BS01 ENO 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 10353846
    6 1ca7:C (2.5) BS02 ENO 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 10353846
    7 3gac:E (2.1) BS01 ENO 5.3.2.1
    5.3.3.12    		 GO:0005125 ... Q1HEA2 20004020
    8 3ggo:A (2.15) BS02 ENO ? GO:0000166 ... O67636 19279014
    9 3ggo:B (2.15) BS01 ENO ? GO:0000166 ... O67636 19279014
    10 3ggo:C (2.15) BS01 ENO ? GO:0000166 ... O67636 19279014
    11 3ggo:D (2.15) BS01 ENO ? GO:0000166 ... O67636 19279014
    12 3ijj:A (1.25) BS02 ENO 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 20534506
    13 3ijj:A (1.25) BS04 ENO 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 20534506
    14 3ijj:B (1.25) BS02 ENO 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 20534506
    15 3ijj:C (1.25) BS03 ENO 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 20534506
    16 3tx6:A (1.5) BS01 ENO ? N/A Q6N8W4 23606130
    17 3uk0:A (1.49) BS01 ENO ? N/A Q139W5 23606130
    18 3ukj:A (1.6) BS01 ENO ? N/A Q2IU40 23606130
    19 4eyq:A (1.96) BS01 ENO ? N/A Q2IU40 23606130
    20 4jb0:A (1.91) BS02 ENO ? N/A Q6N8W4 23555803
    21 4kig:A (2.4) BS01 ENO 2.1.1.281 GO:0008168 ... Q643C8 24914966
    22 4kig:B (2.4) BS02 ENO 2.1.1.281 GO:0008168 ... Q643C8 24914966
    23 5zbf:A (1.6) BS01 ENO N/A N/A N/A 30742895
    24 6jhb:B (2.27) BS02 ENO N/A N/A N/A 31726097
    25 8tt9:A (1.68) BS01 ENO N/A N/A P14174 N/A
    26 8tt9:A (1.68) BS02 ENO N/A N/A P14174 N/A
    27 8tt9:B (1.68) BS01 ENO N/A N/A P14174 N/A
    28 8tt9:B (1.68) BS02 ENO N/A N/A P14174 N/A
    29 8tt9:C (1.68) BS01 ENO N/A N/A P14174 N/A
    30 8tt9:C (1.68) BS02 ENO N/A N/A P14174 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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