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BioLiP
Download all results in tab-seperated text for 240 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    201 8uev:1n (3.7) BS01 EHZ N/A N/A K7GSE5 38811722
    202 8uew:1T (3.6) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    203 8uew:1U (3.6) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    204 8uew:1W (3.6) BS01 EHZ N/A GO:0005739 ... A0A480VKQ8 38811722
    205 8uew:1n (3.6) BS01 EHZ N/A N/A K7GSE5 38811722
    206 8uex:1T (3.9) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    207 8uex:1U (3.9) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    208 8uex:1W (3.9) BS01 EHZ N/A GO:0005739 ... A0A480VKQ8 38811722
    209 8uex:1n (3.9) BS01 EHZ N/A N/A K7GSE5 38811722
    210 8uey:1T (3.6) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    211 8uey:1U (3.6) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    212 8uey:1W (3.6) BS01 EHZ N/A GO:0005739 ... A0A480VKQ8 38811722
    213 8uey:1n (3.6) BS01 EHZ N/A N/A K7GSE5 38811722
    214 8uez:1T (3.5) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    215 8uez:1U (3.5) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    216 8uez:1W (3.5) BS01 EHZ N/A GO:0005739 ... A0A480VKQ8 38811722
    217 8uez:1n (3.5) BS01 EHZ N/A N/A K7GSE5 38811722
    218 8ugh:1U (2.1) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    219 8ugh:1W (2.1) BS01 EHZ N/A GO:0005739 ... A0A480VKQ8 38811722
    220 8ugh:1n (2.1) BS01 EHZ N/A N/A K7GSE5 38811722
    221 8ugi:1U (2.1) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    222 8ugi:1W (2.1) BS01 EHZ N/A GO:0005739 ... A0A480VKQ8 38811722
    223 8ugi:1n (2.1) BS01 EHZ N/A N/A K7GSE5 38811722
    224 8ugj:1U (2.3) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    225 8ugj:1W (2.3) BS01 EHZ N/A GO:0005739 ... A0A480VKQ8 38811722
    226 8ugj:1n (2.3) BS01 EHZ N/A N/A K7GSE5 38811722
    227 8ugn:1T (2.7) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    228 8ugn:1U (2.7) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    229 8ugn:1W (2.7) BS01 EHZ N/A GO:0005739 ... A0A480VKQ8 38811722
    230 8ugn:1n (2.7) BS01 EHZ N/A N/A K7GSE5 38811722
    231 8ugn:5U (2.7) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    232 8ugn:5W (2.7) BS01 EHZ N/A GO:0005739 ... A0A480VKQ8 38811722
    233 8ugn:5n (2.7) BS01 EHZ N/A N/A K7GSE5 38811722
    234 8ugr:1U (6.5) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    235 8ugr:1W (6.5) BS01 EHZ N/A GO:0005739 ... A0A480VKQ8 38811722
    236 8ugr:1n (6.5) BS01 EHZ N/A N/A K7GSE5 38811722
    237 8ugr:5T (6.5) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    238 8ugr:5U (6.5) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    239 8ugr:5W (6.5) BS01 EHZ N/A GO:0005739 ... A0A480VKQ8 38811722
    240 8ugr:5n (6.5) BS01 EHZ N/A N/A K7GSE5 38811722
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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