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BioLiP
Download all results in tab-seperated text for 222 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    201 6wid:A (1.5) BS05 DUP 2.7.7.7 GO:0003677 ... Q9NP87 32963245
    202 7f4y:A (2.2) BS04 DUP 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 34869578
    203 7m07:A (1.57) BS04 DUP 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 35778389
    204 7m09:A (1.65) BS05 DUP 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 35778389
    205 7m0b:A (2.0) BS05 DUP 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 35778389
    206 7m0d:A (1.8) BS06 DUP 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 35778389
    207 7m0d:B (1.8) BS06 DUP 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 35778389
    208 7m0e:A (2.25) BS05 DUP 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 35778389
    209 7m0e:B (2.25) BS06 DUP 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 35778389
    210 7m0e:C (2.25) BS06 DUP 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 35778389
    211 7m0e:D (2.25) BS06 DUP 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 35778389
    212 8cga:A (1.3) BS01 DUP 3.6.1.23 GO:0000287 ... P9WNS5 N/A
    213 8hrv:A (2.0) BS01 DUP 3.6.1.23 GO:0000287 ... O25536 N/A
    214 8hrv:A (2.0) BS02 DUP 3.6.1.23 GO:0000287 ... O25536 N/A
    215 8hrv:A (2.0) BS03 DUP 3.6.1.23 GO:0000287 ... O25536 N/A
    216 8hrv:B (2.0) BS01 DUP 3.6.1.23 GO:0000287 ... O25536 N/A
    217 8hrv:B (2.0) BS02 DUP 3.6.1.23 GO:0000287 ... O25536 N/A
    218 8hrv:B (2.0) BS03 DUP 3.6.1.23 GO:0000287 ... O25536 N/A
    219 8hrv:C (2.0) BS01 DUP 3.6.1.23 GO:0000287 ... O25536 N/A
    220 8hrv:C (2.0) BS02 DUP 3.6.1.23 GO:0000287 ... O25536 N/A
    221 8hrv:C (2.0) BS03 DUP 3.6.1.23 GO:0000287 ... O25536 N/A
    222 8u0p:A (1.9) BS06 DUP 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 38428373
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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