Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 864 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1 2 3 4 5 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    801 8tey:U (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    802 8tey:U (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    803 8tey:V (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    804 8tey:V (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    805 8tey:W (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    806 8tey:W (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    807 8tey:X (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    808 8tey:X (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    809 8tey:Y (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    810 8tey:Y (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    811 8tey:Z (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    812 8tey:Z (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    813 8tey:a (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    814 8tey:a (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    815 8tey:b (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    816 8tey:b (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    817 8tey:c (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    818 8tey:c (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    819 8tey:d (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    820 8tey:d (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    821 8tey:e (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    822 8tey:e (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    823 8tey:f (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    824 8tey:f (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    825 8tey:g (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    826 8tey:g (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    827 8tey:h (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    828 8tey:h (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    829 8tey:i (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    830 8tey:i (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    831 8tey:j (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    832 8tey:j (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    833 8tey:k (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    834 8tey:k (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    835 8tey:l (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    836 8tey:l (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    837 8tey:m (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    838 8tey:m (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    839 8tey:n (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    840 8tey:n (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    841 8tey:o (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    842 8tey:o (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    843 8tey:p (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    844 8tey:p (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    845 8tey:q (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    846 8tey:q (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    847 8tey:r (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    848 8tey:r (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    849 8tey:s (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    850 8tey:s (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    851 8tey:t (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    852 8tey:t (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    853 8tey:u (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    854 8tey:u (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    855 8tey:v (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    856 8tey:v (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    857 8tey:w (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    858 8tey:w (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    859 8tey:x (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    860 8tey:x (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    861 8tey:y (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    862 8tey:y (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    863 8tey:z (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    864 8tey:z (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218