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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 864 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    601 7ltm:e (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    602 7ltm:f (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    603 7ltm:g (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    604 7ltm:h (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    605 7ltm:i (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    606 7ltm:j (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    607 7ltm:k (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    608 7ltm:l (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    609 7ltm:m (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    610 7ltm:n (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    611 7ltm:o (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    612 7ltm:p (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    613 7ltm:q (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    614 7ltm:r (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    615 7ltm:s (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    616 7ltm:t (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    617 7ltm:u (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    618 7ltm:v (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    619 7ltm:w (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    620 7ltm:x (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    621 7ltm:y (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    622 7ltm:z (2.49) BS01 DA ? GO:0005198 ... Q8JQF8 34232726
    623 7rl1:1 (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    624 7rl1:2 (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    625 7rl1:3 (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    626 7rl1:4 (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    627 7rl1:5 (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    628 7rl1:6 (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    629 7rl1:7 (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    630 7rl1:8 (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    631 7rl1:A (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    632 7rl1:B (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    633 7rl1:C (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    634 7rl1:D (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    635 7rl1:E (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    636 7rl1:F (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    637 7rl1:G (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    638 7rl1:H (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    639 7rl1:I (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    640 7rl1:J (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    641 7rl1:K (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    642 7rl1:L (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    643 7rl1:M (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    644 7rl1:N (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    645 7rl1:O (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    646 7rl1:P (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    647 7rl1:Q (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    648 7rl1:R (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    649 7rl1:S (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    650 7rl1:T (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    651 7rl1:U (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    652 7rl1:V (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    653 7rl1:W (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    654 7rl1:X (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    655 7rl1:Y (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    656 7rl1:Z (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    657 7rl1:a (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    658 7rl1:b (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    659 7rl1:c (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    660 7rl1:d (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    661 7rl1:e (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    662 7rl1:f (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    663 7rl1:g (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    664 7rl1:h (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    665 7rl1:i (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    666 7rl1:j (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    667 7rl1:k (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    668 7rl1:l (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    669 7rl1:m (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    670 7rl1:n (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    671 7rl1:o (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    672 7rl1:p (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    673 7rl1:q (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    674 7rl1:r (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    675 7rl1:s (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    676 7rl1:t (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    677 7rl1:u (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    678 7rl1:v (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    679 7rl1:w (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    680 7rl1:x (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    681 7rl1:y (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    682 7rl1:z (2.71) BS02 DA ? GO:0005198 ... Q6JC62 34549984
    683 8efg:A (1.5) BS02 DA 3.1.21.- GO:0004518 ... Q6P1N9 36881763
    684 8efg:A (1.5) BS03 DA 3.1.21.- GO:0004518 ... Q6P1N9 36881763
    685 8fyw:1 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    686 8fyw:2 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    687 8fyw:3 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    688 8fyw:4 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    689 8fyw:5 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    690 8fyw:6 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    691 8fyw:7 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    692 8fyw:8 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    693 8fyw:A (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    694 8fyw:B (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    695 8fyw:C (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    696 8fyw:D (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    697 8fyw:E (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    698 8fyw:F (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    699 8fyw:G (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    700 8fyw:H (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    701 8fyw:I (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    702 8fyw:J (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    703 8fyw:K (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    704 8fyw:L (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    705 8fyw:M (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    706 8fyw:N (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    707 8fyw:O (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    708 8fyw:P (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    709 8fyw:Q (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    710 8fyw:R (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    711 8fyw:S (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    712 8fyw:T (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    713 8fyw:U (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    714 8fyw:V (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    715 8fyw:W (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    716 8fyw:X (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    717 8fyw:Y (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    718 8fyw:Z (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    719 8fyw:a (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    720 8fyw:b (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    721 8fyw:c (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    722 8fyw:d (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    723 8fyw:e (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    724 8fyw:f (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    725 8fyw:g (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    726 8fyw:h (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    727 8fyw:i (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    728 8fyw:j (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    729 8fyw:k (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    730 8fyw:l (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    731 8fyw:m (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    732 8fyw:n (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    733 8fyw:o (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    734 8fyw:p (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    735 8fyw:q (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    736 8fyw:r (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    737 8fyw:s (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    738 8fyw:t (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    739 8fyw:u (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    740 8fyw:v (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    741 8fyw:w (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    742 8fyw:x (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    743 8fyw:y (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    744 8fyw:z (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    745 8tey:1 (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    746 8tey:1 (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    747 8tey:2 (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    748 8tey:2 (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    749 8tey:3 (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    750 8tey:3 (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    751 8tey:4 (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    752 8tey:4 (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    753 8tey:5 (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    754 8tey:5 (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    755 8tey:6 (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    756 8tey:6 (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    757 8tey:7 (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    758 8tey:7 (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    759 8tey:8 (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    760 8tey:8 (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    761 8tey:A (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    762 8tey:A (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    763 8tey:B (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    764 8tey:B (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    765 8tey:C (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    766 8tey:C (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    767 8tey:D (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    768 8tey:D (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    769 8tey:E (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    770 8tey:E (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    771 8tey:F (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    772 8tey:F (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    773 8tey:G (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    774 8tey:G (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    775 8tey:H (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    776 8tey:H (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    777 8tey:I (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    778 8tey:I (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    779 8tey:J (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    780 8tey:J (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    781 8tey:K (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    782 8tey:K (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    783 8tey:L (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    784 8tey:L (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    785 8tey:M (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    786 8tey:M (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    787 8tey:N (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    788 8tey:N (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    789 8tey:O (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    790 8tey:O (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    791 8tey:P (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    792 8tey:P (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    793 8tey:Q (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    794 8tey:Q (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    795 8tey:R (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    796 8tey:R (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    797 8tey:S (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    798 8tey:S (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    799 8tey:T (3.06) BS01 DA ? GO:0005198 ... Q7TG43 37702486
    800 8tey:T (3.06) BS02 DA ? GO:0005198 ... Q7TG43 37702486
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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