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BioLiP
Download all results in tab-seperated text for 6639 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    6601 8z77:B (2.0) BS03 CU ? GO:0046872 ... A0A5C7ETD9 N/A
    6602 8z77:C (2.0) BS01 CU ? GO:0046872 ... A0A5C7ETD9 N/A
    6603 8z77:C (2.0) BS02 CU ? GO:0046872 ... A0A5C7ETD9 N/A
    6604 8z77:C (2.0) BS03 CU ? GO:0046872 ... A0A5C7ETD9 N/A
    6605 8zyg:A (1.08) BS01 CU N/A N/A Q9X1H0 N/A
    6606 8zyg:B (1.08) BS01 CU N/A N/A Q9X1H0 N/A
    6607 8zyh:A (1.07) BS01 CU N/A N/A Q9X1H0 N/A
    6608 8zyh:B (1.07) BS01 CU N/A N/A Q9X1H0 N/A
    6609 9evm:A (1.8) BS02 CU N/A N/A Q89EJ6 39002715
    6610 9evm:A (1.8) BS03 CU N/A N/A Q89EJ6 39002715
    6611 9f1t:A (3.0) BS01 CU N/A N/A Q04HQ8 39126090
    6612 9f1t:A (3.0) BS02 CU N/A N/A Q04HQ8 39126090
    6613 9f1t:A (3.0) BS03 CU N/A N/A Q04HQ8 39126090
    6614 9f1t:A (3.0) BS04 CU N/A N/A Q04HQ8 39126090
    6615 9f1t:B (3.0) BS01 CU N/A N/A Q04HQ8 39126090
    6616 9f1t:B (3.0) BS02 CU N/A N/A Q04HQ8 39126090
    6617 9f1t:B (3.0) BS03 CU N/A N/A Q04HQ8 39126090
    6618 9f1t:B (3.0) BS04 CU N/A N/A Q04HQ8 39126090
    6619 9f3z:A (3.5) BS01 CU N/A N/A Q04HQ8 39126090
    6620 9f3z:A (3.5) BS02 CU N/A N/A Q04HQ8 39126090
    6621 9f3z:A (3.5) BS03 CU N/A N/A Q04HQ8 39126090
    6622 9f3z:A (3.5) BS04 CU N/A N/A Q04HQ8 39126090
    6623 9f3z:B (3.5) BS01 CU N/A N/A Q04HQ8 39126090
    6624 9f3z:B (3.5) BS02 CU N/A N/A Q04HQ8 39126090
    6625 9f3z:B (3.5) BS03 CU N/A N/A Q04HQ8 39126090
    6626 9f3z:B (3.5) BS04 CU N/A N/A Q04HQ8 39126090
    6627 9iyk:A (2.34) BS01 CU N/A N/A P00441 N/A
    6628 9iyk:B (2.34) BS01 CU N/A N/A P00441 N/A
    6629 9iyk:C (2.34) BS01 CU N/A N/A P00441 N/A
    6630 9iyk:D (2.34) BS01 CU N/A N/A P00441 N/A
    6631 9iyk:E (2.34) BS01 CU N/A N/A P00441 N/A
    6632 9iyk:F (2.34) BS01 CU N/A N/A P00441 N/A
    6633 9iyk:G (2.34) BS01 CU N/A N/A P00441 N/A
    6634 9iyk:H (2.34) BS01 CU N/A N/A P00441 N/A
    6635 9iyk:I (2.34) BS01 CU N/A N/A P00441 N/A
    6636 9iyk:J (2.34) BS01 CU N/A N/A P00441 N/A
    6637 9iyk:K (2.34) BS01 CU N/A N/A P00441 N/A
    6638 9iyk:L (2.34) BS01 CU N/A N/A P00441 N/A
    6639 9pcy:A (-1.00) BS01 CU ? GO:0005507 ... P00287 1920431
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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