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BioLiP
Download all results in tab-seperated text for 6639 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    5601 7puh:B (1.3) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 35008493
    5602 7puh:B (1.3) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 35008493
    5603 7puh:C (1.3) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 35008493
    5604 7puh:C (1.3) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 35008493
    5605 7puh:C (1.3) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 35008493
    5606 7puh:C (1.3) BS05 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 35008493
    5607 7puh:D (1.3) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 35008493
    5608 7puh:D (1.3) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 35008493
    5609 7puh:D (1.3) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 35008493
    5610 7puh:D (1.3) BS06 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 35008493
    5611 7puh:E (1.3) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 35008493
    5612 7puh:E (1.3) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 35008493
    5613 7puh:E (1.3) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 35008493
    5614 7puh:E (1.3) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 35008493
    5615 7puh:F (1.3) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 35008493
    5616 7puh:F (1.3) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 35008493
    5617 7puh:F (1.3) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 35008493
    5618 7puh:F (1.3) BS05 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 35008493
    5619 7pxi:A (1.63) BS01 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5620 7pxj:A (1.75) BS01 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5621 7pxk:A (1.4) BS01 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5622 7pxl:A (1.35) BS01 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5623 7pxm:A (1.3) BS01 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5624 7pxn:A (1.65) BS01 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5625 7pxr:A (1.8) BS01 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5626 7pxs:A (1.9) BS01 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5627 7pxt:A (2.4) BS01 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5628 7pxu:A (1.8) BS01 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5629 7pxv:A (1.5) BS01 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5630 7pxw:A (1.4) BS02 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5631 7pyd:A (2.21) BS05 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5632 7pye:A (2.1) BS05 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5633 7pyf:A (1.9) BS04 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5634 7pyg:A (1.9) BS05 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5635 7pyh:A (1.9) BS04 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5636 7pyi:A (2.05) BS05 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5637 7pyl:A (1.7) BS01 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5638 7pym:A (1.75) BS01 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5639 7pyn:A (1.4) BS01 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5640 7pyo:A (1.4) BS01 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5641 7pyp:A (1.6) BS01 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5642 7pyq:A (1.6) BS01 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5643 7pyu:A (1.4) BS04 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5644 7pyw:A (1.4) BS04 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5645 7pyx:A (1.6) BS02 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5646 7pyy:A (1.2) BS03 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5647 7pyz:A (1.6) BS03 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5648 7pz0:A (1.2) BS06 CU 3.2.1.4 GO:0004497 ... A0A0S2GKZ1 36071795
    5649 7pz3:A (1.9) BS01 CU 3.2.1.4 GO:0004497 ... G3XAP7 36071795
    5650 7pz4:A (1.85) BS01 CU 3.2.1.4 GO:0004497 ... G3XAP7 36071795
    5651 7pz5:A (1.45) BS01 CU 3.2.1.4 GO:0004497 ... G3XAP7 36071795
    5652 7pz6:A (1.45) BS01 CU 3.2.1.4 GO:0004497 ... G3XAP7 36071795
    5653 7pz7:A (1.8) BS01 CU 3.2.1.4 GO:0004497 ... G3XAP7 36071795
    5654 7pz8:A (1.4) BS01 CU 3.2.1.4 GO:0004497 ... G3XAP7 36071795
    5655 7q1k:A (1.36) BS01 CU 3.2.1.4 GO:0004497 ... G3XAP7 N/A
    5656 7q21:D (2.9) BS03 CU 7.1.1.9 GO:0004129 ... Q79VD7 34910901
    5657 7q21:G (2.9) BS01 CU 7.1.1.9 GO:0004129 ... Q8NNK2 34910901
    5658 7q21:G (2.9) BS02 CU 7.1.1.9 GO:0004129 ... Q8NNK2 34910901
    5659 7q21:d (2.9) BS03 CU 7.1.1.9 GO:0004129 ... Q79VD7 34910901
    5660 7q21:g (2.9) BS01 CU 7.1.1.9 GO:0004129 ... Q8NNK2 34910901
    5661 7q21:g (2.9) BS02 CU 7.1.1.9 GO:0004129 ... Q8NNK2 34910901
    5662 7qhm:D (2.8) BS03 CU 7.1.1.9 GO:0004129 ... Q79VD7 35087070
    5663 7qhm:Q (2.8) BS03 CU 7.1.1.9 GO:0004129 ... Q79VD7 35087070
    5664 7qho:D (3.1) BS03 CU 7.1.1.9 GO:0004129 ... Q79VD7 35087070
    5665 7qho:Q (3.1) BS03 CU 7.1.1.9 GO:0004129 ... Q79VD7 35087070
    5666 7qq2:A (2.1) BS01 CU 1.7.2.1 GO:0005507 ... I6NAW4 N/A
    5667 7qq2:A (2.1) BS02 CU 1.7.2.1 GO:0005507 ... I6NAW4 N/A
    5668 7qxk:A (1.35) BS01 CU 1.7.2.1 GO:0005507 ... H0SLX7 35862453
    5669 7qxk:A (1.35) BS02 CU 1.7.2.1 GO:0005507 ... H0SLX7 35862453
    5670 7qy4:A (1.35) BS01 CU 1.7.2.1 GO:0005507 ... H0SLX7 35862453
    5671 7qy4:A (1.35) BS02 CU 1.7.2.1 GO:0005507 ... H0SLX7 35862453
    5672 7qyc:A (1.35) BS01 CU 1.7.2.1 GO:0005507 ... H0SLX7 35862453
    5673 7qyc:A (1.35) BS02 CU 1.7.2.1 GO:0005507 ... H0SLX7 35862453
    5674 7r0h:A (3.31) BS01 CU 7.2.2.8 GO:0000166 ... O29777 36045128
    5675 7r2u:A (1.5) BS01 CU 1.7.2.1 GO:0005507 ... I6NAW4 N/A
    5676 7r2u:A (1.5) BS02 CU 1.7.2.1 GO:0005507 ... I6NAW4 N/A
    5677 7r5e:A (2.2) BS01 CU ? GO:0046872 ... A0A4R2M5S2 35527501
    5678 7r5e:B (2.2) BS01 CU ? GO:0046872 ... A0A4R2M5S2 35527501
    5679 7r5g:A (2.2) BS01 CU ? GO:0046872 ... A0A4R2M5S2 35527501
    5680 7r5g:B (2.2) BS01 CU ? GO:0046872 ... A0A4R2M5S2 35527501
    5681 7rab:A (1.92) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5682 7rab:A (1.92) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5683 7rab:B (1.92) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5684 7rab:B (1.92) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5685 7rab:C (1.92) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5686 7rab:C (1.92) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5687 7rab:D (1.92) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5688 7rab:D (1.92) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5689 7rab:E (1.92) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5690 7rab:E (1.92) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5691 7rab:F (1.92) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5692 7rab:F (1.92) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5693 7rab:G (1.92) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5694 7rab:G (1.92) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5695 7rab:H (1.92) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5696 7rab:H (1.92) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5697 7rac:A (2.36) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5698 7rac:A (2.36) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5699 7rac:B (2.36) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5700 7rac:B (2.36) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5701 7rac:C (2.36) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5702 7rac:C (2.36) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5703 7rac:D (2.36) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5704 7rac:D (2.36) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5705 7rac:E (2.36) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5706 7rac:E (2.36) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5707 7rac:F (2.36) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5708 7rac:F (2.36) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5709 7rac:G (2.36) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5710 7rac:G (2.36) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5711 7rac:H (2.36) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5712 7rac:H (2.36) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5713 7rac:I (2.36) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5714 7rac:I (2.36) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5715 7rac:J (2.36) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5716 7rac:J (2.36) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5717 7rac:K (2.36) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5718 7rac:K (2.36) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5719 7rac:L (2.36) BS01 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5720 7rac:L (2.36) BS02 CU 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    5721 7rh5:K (3.0) BS01 CU 7.1.1.9 GO:0004129 ... A0R057 34590581
    5722 7rh5:K (3.0) BS02 CU 7.1.1.9 GO:0004129 ... A0R057 34590581
    5723 7rh5:L (3.0) BS01 CU N/A GO:0004129 ... N/A 34590581
    5724 7rh5:Q (3.0) BS01 CU 7.1.1.9 GO:0004129 ... A0R057 34590581
    5725 7rh5:Q (3.0) BS02 CU 7.1.1.9 GO:0004129 ... A0R057 34590581
    5726 7rh5:R (3.0) BS01 CU N/A GO:0004129 ... N/A 34590581
    5727 7rh6:K (3.5) BS01 CU 7.1.1.9 GO:0004129 ... A0R057 34590581
    5728 7rh6:K (3.5) BS02 CU 7.1.1.9 GO:0004129 ... A0R057 34590581
    5729 7rh6:L (3.5) BS01 CU N/A GO:0004129 ... N/A 34590581
    5730 7rh6:Q (3.5) BS01 CU 7.1.1.9 GO:0004129 ... A0R057 34590581
    5731 7rh6:Q (3.5) BS02 CU 7.1.1.9 GO:0004129 ... A0R057 34590581
    5732 7rh6:R (3.5) BS01 CU N/A GO:0004129 ... N/A 34590581
    5733 7rh7:K (3.0) BS01 CU 7.1.1.9 GO:0004129 ... A0R057 34590581
    5734 7rh7:K (3.0) BS02 CU 7.1.1.9 GO:0004129 ... A0R057 34590581
    5735 7rh7:L (3.0) BS01 CU N/A GO:0004129 ... N/A 34590581
    5736 7rh7:Q (3.0) BS01 CU 7.1.1.9 GO:0004129 ... A0R057 34590581
    5737 7rh7:Q (3.0) BS02 CU 7.1.1.9 GO:0004129 ... A0R057 34590581
    5738 7rh7:R (3.0) BS02 CU N/A GO:0004129 ... N/A 34590581
    5739 7s1c:B (1.949) BS01 CU ? GO:0003756 ... P0AEG4 N/A
    5740 7s1c:B (1.949) BS02 CU ? GO:0003756 ... P0AEG4 N/A
    5741 7s1d:B (1.59) BS01 CU ? GO:0003756 ... P0AEG4 N/A
    5742 7s1f:B (1.76) BS01 CU ? GO:0003756 ... P0AEG4 N/A
    5743 7s1l:B (1.623) BS02 CU ? GO:0003756 ... P0AEG4 N/A
    5744 7s4h:A (2.14) BS01 CU 1.14.18.3 N/A G1UBD1 35298269
    5745 7s4h:A (2.14) BS02 CU 1.14.18.3 N/A G1UBD1 35298269
    5746 7s4h:C (2.14) BS01 CU 1.14.13.25 GO:0004497 ... Q603F1 35298269
    5747 7s4h:E (2.14) BS01 CU 1.14.18.3 N/A G1UBD1 35298269
    5748 7s4h:E (2.14) BS02 CU 1.14.18.3 N/A G1UBD1 35298269
    5749 7s4h:G (2.14) BS01 CU 1.14.13.25 GO:0004497 ... Q603F1 35298269
    5750 7s4h:I (2.14) BS01 CU 1.14.18.3 N/A G1UBD1 35298269
    5751 7s4h:I (2.14) BS02 CU 1.14.18.3 N/A G1UBD1 35298269
    5752 7s4h:K (2.14) BS01 CU 1.14.13.25 GO:0004497 ... Q603F1 35298269
    5753 7s4i:A (2.26) BS01 CU 1.14.18.3 N/A G1UBD1 35298269
    5754 7s4i:A (2.26) BS02 CU 1.14.18.3 N/A G1UBD1 35298269
    5755 7s4i:C (2.26) BS01 CU 1.14.13.25 GO:0004497 ... Q603F1 35298269
    5756 7s4i:E (2.26) BS01 CU 1.14.18.3 N/A G1UBD1 35298269
    5757 7s4i:E (2.26) BS02 CU 1.14.18.3 N/A G1UBD1 35298269
    5758 7s4i:G (2.26) BS01 CU 1.14.13.25 GO:0004497 ... Q603F1 35298269
    5759 7s4i:I (2.26) BS01 CU 1.14.18.3 N/A G1UBD1 35298269
    5760 7s4i:I (2.26) BS02 CU 1.14.18.3 N/A G1UBD1 35298269
    5761 7s4i:K (2.26) BS01 CU 1.14.13.25 GO:0004497 ... Q603F1 35298269
    5762 7s4j:A (2.16) BS01 CU 1.14.18.3 N/A G1UBD1 35298269
    5763 7s4j:A (2.16) BS02 CU 1.14.18.3 N/A G1UBD1 35298269
    5764 7s4j:C (2.16) BS01 CU 1.14.13.25 GO:0004497 ... Q603F1 35298269
    5765 7s4j:E (2.16) BS01 CU 1.14.18.3 N/A G1UBD1 35298269
    5766 7s4j:E (2.16) BS02 CU 1.14.18.3 N/A G1UBD1 35298269
    5767 7s4j:G (2.16) BS01 CU 1.14.13.25 GO:0004497 ... Q603F1 35298269
    5768 7s4j:I (2.16) BS01 CU 1.14.18.3 N/A G1UBD1 35298269
    5769 7s4j:I (2.16) BS02 CU 1.14.18.3 N/A G1UBD1 35298269
    5770 7s4j:K (2.16) BS01 CU 1.14.13.25 GO:0004497 ... Q603F1 35298269
    5771 7s4k:A (2.36) BS01 CU 1.14.18.3 N/A G1UBD1 35298269
    5772 7s4k:A (2.36) BS02 CU 1.14.18.3 N/A G1UBD1 35298269
    5773 7s4k:C (2.36) BS01 CU 1.14.13.25 GO:0004497 ... Q603F1 35298269
    5774 7s4k:E (2.36) BS01 CU 1.14.18.3 N/A G1UBD1 35298269
    5775 7s4k:E (2.36) BS02 CU 1.14.18.3 N/A G1UBD1 35298269
    5776 7s4k:G (2.36) BS01 CU 1.14.13.25 GO:0004497 ... Q603F1 35298269
    5777 7s4k:I (2.36) BS01 CU 1.14.18.3 N/A G1UBD1 35298269
    5778 7s4k:I (2.36) BS02 CU 1.14.18.3 N/A G1UBD1 35298269
    5779 7s4k:K (2.36) BS01 CU 1.14.13.25 GO:0004497 ... Q603F1 35298269
    5780 7s4l:A (2.46) BS01 CU 1.14.13.25 N/A G4SZ64 35298269
    5781 7s4l:A (2.46) BS02 CU 1.14.13.25 N/A G4SZ64 35298269
    5782 7s4l:C (2.46) BS01 CU 1.14.13.25 GO:0004497 ... G4SZ62 35298269
    5783 7s4l:D (2.46) BS02 CU 1.14.13.25 N/A G4SZ64 35298269
    5784 7s4l:D (2.46) BS03 CU 1.14.13.25 N/A G4SZ64 35298269
    5785 7s4l:E (2.46) BS02 CU 1.14.13.25 N/A G4SZ64 35298269
    5786 7s4l:E (2.46) BS03 CU 1.14.13.25 N/A G4SZ64 35298269
    5787 7s4l:H (2.46) BS01 CU 1.14.13.25 GO:0004497 ... G4SZ62 35298269
    5788 7s4l:I (2.46) BS01 CU 1.14.13.25 GO:0004497 ... G4SZ62 35298269
    5789 7s4m:A (2.42) BS01 CU N/A N/A N/A 35298269
    5790 7s4m:C (2.42) BS01 CU N/A N/A N/A 35298269
    5791 7s4m:E (2.42) BS01 CU N/A N/A N/A 35298269
    5792 7s4m:G (2.42) BS02 CU N/A N/A N/A 35298269
    5793 7s4m:I (2.42) BS01 CU N/A N/A N/A 35298269
    5794 7s4m:K (2.42) BS02 CU N/A N/A N/A 35298269
    5795 7t4o:A (3.65) BS01 CU 1.14.18.3 N/A G1UBD1 35298269
    5796 7t4o:A (3.65) BS02 CU 1.14.18.3 N/A G1UBD1 35298269
    5797 7t4o:E (3.65) BS01 CU 1.14.18.3 N/A G1UBD1 35298269
    5798 7t4o:E (3.65) BS02 CU 1.14.18.3 N/A G1UBD1 35298269
    5799 7t4o:I (3.65) BS01 CU 1.14.18.3 N/A G1UBD1 35298269
    5800 7t4p:A (3.62) BS01 CU 1.14.18.3 N/A G1UBD1 35298269
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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