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BioLiP
Download all results in tab-seperated text for 6639 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    4601 6l2d:B (1.198) BS01 CU ? GO:0046872 ... Q9X1H0 32073197
    4602 6l2e:A (1.201) BS01 CU ? GO:0046872 ... Q9X1H0 32073197
    4603 6l2e:B (1.201) BS01 CU ? GO:0046872 ... Q9X1H0 32073197
    4604 6l2f:A (1.23) BS01 CU ? GO:0046872 ... Q9X1H0 32073197
    4605 6l2f:B (1.23) BS01 CU ? GO:0046872 ... Q9X1H0 32073197
    4606 6l46:A (1.3) BS01 CU N/A N/A N/A 32041886
    4607 6l46:A (1.3) BS02 CU N/A N/A N/A 32041886
    4608 6l46:A (1.3) BS03 CU N/A N/A N/A 32041886
    4609 6l4c:A (3.191) BS01 CU ? GO:0004784 ... Q8S4P9 31753489
    4610 6l4c:B (3.191) BS01 CU ? GO:0004784 ... Q8S4P9 31753489
    4611 6l4c:C (3.191) BS01 CU ? GO:0004784 ... Q8S4P9 31753489
    4612 6l58:A (3.90271) BS01 CU 1.16.3.1 GO:0004322 ... D3JCC5 35359603
    4613 6l58:B (3.90271) BS01 CU 1.16.3.1 GO:0004322 ... D3JCC5 35359603
    4614 6l58:C (3.90271) BS01 CU 1.16.3.1 GO:0004322 ... D3JCC5 35359603
    4615 6l58:D (3.90271) BS01 CU 1.16.3.1 GO:0004322 ... D3JCC5 35359603
    4616 6l8s:A (1.58) BS01 CU N/A GO:0016491 ... N/A 32380017
    4617 6l8s:A (1.58) BS02 CU N/A GO:0016491 ... N/A 32380017
    4618 6l8s:B (1.58) BS01 CU N/A GO:0016491 ... N/A 32380017
    4619 6l8s:B (1.58) BS02 CU N/A GO:0016491 ... N/A 32380017
    4620 6l8s:C (1.58) BS01 CU N/A GO:0016491 ... N/A 32380017
    4621 6l8s:C (1.58) BS02 CU N/A GO:0016491 ... N/A 32380017
    4622 6l9c:X (1.14) BS01 CU 1.4.3.21 GO:0005507 ... P46881 32371483
    4623 6lv9:A (1.2) BS01 CU 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32917908
    4624 6lva:A (1.2) BS01 CU 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32917908
    4625 6mjr:A (2.012) BS01 CU ? GO:0005507 ... P00282 30693338
    4626 6mjr:B (2.012) BS01 CU ? GO:0005507 ... P00282 30693338
    4627 6mjr:C (2.012) BS02 CU ? GO:0005507 ... P00282 30693338
    4628 6mjr:D (2.012) BS01 CU ? GO:0005507 ... P00282 30693338
    4629 6mjs:A (1.85) BS01 CU ? GO:0005507 ... P00282 30693338
    4630 6mjs:B (1.85) BS01 CU ? GO:0005507 ... P00282 30693338
    4631 6mjs:C (1.85) BS01 CU ? GO:0005507 ... P00282 30693338
    4632 6mjs:D (1.85) BS02 CU ? GO:0005507 ... P00282 30693338
    4633 6mjt:A (1.893) BS01 CU ? GO:0005507 ... P00282 30693338
    4634 6mjt:B (1.893) BS01 CU ? GO:0005507 ... P00282 30693338
    4635 6muj:A (2.249) BS02 CU 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    4636 6muj:A (2.249) BS03 CU 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    4637 6muj:B (2.249) BS02 CU 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    4638 6muj:B (2.249) BS03 CU 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    4639 6muj:C (2.249) BS02 CU 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    4640 6muj:D (2.249) BS02 CU 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    4641 6muj:D (2.249) BS03 CU 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    4642 6muj:D (2.249) BS04 CU 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    4643 6muj:E (2.249) BS02 CU 1.8.3.7 GO:0005509 ... Q9F3C7 30824597
    4644 6nck:A (2.7) BS01 CU 1.14.17.3
    4.3.2.5
    GO:0003824 ... P14925 30704096
    4645 6nfq:A (2.0) BS01 CU ? GO:0005507 ... C3JYL7 30981030
    4646 6nfq:B (2.0) BS01 CU ? GO:0005507 ... C3JYL7 30981030
    4647 6nfq:C (2.0) BS01 CU ? GO:0005507 ... C3JYL7 30981030
    4648 6nkn:A (2.5) BS01 CU 7.1.1.9 GO:0004129 ... P00396 30808749
    4649 6nkn:N (2.5) BS01 CU 7.1.1.9 GO:0004129 ... P00396 30808749
    4650 6nmf:A (2.8) BS03 CU 7.1.1.9 GO:0004129 ... P00396 30808749
    4651 6nmf:N (2.8) BS03 CU 7.1.1.9 GO:0004129 ... P00396 30808749
    4652 6nmp:A (2.9) BS01 CU 7.1.1.9 GO:0004129 ... P00396 30808749
    4653 6nmp:N (2.9) BS01 CU 7.1.1.9 GO:0004129 ... P00396 30808749
    4654 6p16:A (1.913) BS01 CU N/A N/A N/A 31527086
    4655 6p16:B (1.913) BS01 CU N/A N/A N/A 31527086
    4656 6p1g:A (2.05) BS01 CU ? N/A A0A2D2CWX5 31527086
    4657 6p1g:B (2.05) BS01 CU ? N/A A0A2D2CWX5 31527086
    4658 6paz:A (1.91) BS01 CU ? GO:0005507 ... P04377 9341204
    4659 6pcy:A (1.9) BS01 CU ? GO:0005507 ... P00299 3560221
    4660 6pdv:A (1.23) BS01 CU 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32148856
    4661 6pdv:A (1.23) BS02 CU 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32148856
    4662 6pg1:B (2.01) BS01 CU ? GO:0003756 ... P0AEG4 32529824
    4663 6pg2:B (1.91) BS01 CU ? GO:0003756 ... P0AEG4 32529824
    4664 6piq:B (2.1) BS01 CU ? GO:0003756 ... P0AEG4 32529824
    4665 6pli:B (1.93) BS01 CU ? GO:0003756 ... P0AEG4 32529824
    4666 6pmf:B (1.95) BS01 CU ? GO:0003756 ... P0AEG4 31635355
    4667 6pml:B (2.0) BS02 CU ? GO:0003756 ... P0AEG4 31635355
    4668 6poh:B (1.67) BS01 CU ? GO:0003756 ... P0AEG4 31635355
    4669 6poi:B (1.77) BS01 CU ? GO:0003756 ... P0AEG4 31635355
    4670 6poq:B (1.8) BS01 CU ? GO:0003756 ... P0AEG4 31635355
    4671 6pvy:B (1.74) BS01 CU ? GO:0003756 ... P0AEG4 31635355
    4672 6pvz:B (1.99) BS01 CU ? GO:0003756 ... P0AEG4 31635355
    4673 6pw0:A (2.5) BS08 CU 7.1.1.9 GO:0004129 ... Q3J5A7 31733183
    4674 6pw0:B (2.5) BS03 CU 7.1.1.9 GO:0004129 ... Q3J5G0 31733183
    4675 6pw0:B (2.5) BS04 CU 7.1.1.9 GO:0004129 ... Q3J5G0 31733183
    4676 6pw0:C (2.5) BS04 CU 7.1.1.9 GO:0004129 ... Q3J5A7 31733183
    4677 6pw0:D (2.5) BS03 CU 7.1.1.9 GO:0004129 ... Q3J5G0 31733183
    4678 6pw0:D (2.5) BS04 CU 7.1.1.9 GO:0004129 ... Q3J5G0 31733183
    4679 6pw1:A (2.1) BS06 CU 7.1.1.9 GO:0004129 ... Q3J5A7 31733183
    4680 6pw1:B (2.1) BS02 CU 7.1.1.9 GO:0004129 ... Q3J5G0 31733183
    4681 6pw1:B (2.1) BS03 CU 7.1.1.9 GO:0004129 ... Q3J5G0 31733183
    4682 6pw1:C (2.1) BS04 CU 7.1.1.9 GO:0004129 ... Q3J5A7 31733183
    4683 6pw1:D (2.1) BS01 CU 7.1.1.9 GO:0004129 ... Q3J5G0 31733183
    4684 6pw1:D (2.1) BS02 CU 7.1.1.9 GO:0004129 ... Q3J5G0 31733183
    4685 6q29:A (1.702) BS01 CU 1.10.3.2 GO:0005507 ... Q72HW2 33962016
    4686 6q29:A (1.702) BS02 CU 1.10.3.2 GO:0005507 ... Q72HW2 33962016
    4687 6q63:A (2.44) BS01 CU 3.2.1.52 GO:0004553 ... A0A174QSL3 31160824
    4688 6q63:B (2.44) BS01 CU 3.2.1.52 GO:0004553 ... A0A174QSL3 31160824
    4689 6q63:C (2.44) BS01 CU 3.2.1.52 GO:0004553 ... A0A174QSL3 31160824
    4690 6q6b:A (1.9) BS12 CU ? GO:0046872 ... Q9X8F4 31111982
    4691 6q6b:B (1.9) BS10 CU ? GO:0046872 ... Q9X8F4 31111982
    4692 6q6b:B (1.9) BS11 CU ? GO:0046872 ... Q9X8F4 31111982
    4693 6q6b:B (1.9) BS12 CU ? GO:0046872 ... Q9X8F4 31111982
    4694 6qpt:A (1.9) BS01 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4695 6qpt:A (1.9) BS02 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4696 6qpt:B (1.9) BS01 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4697 6qpt:B (1.9) BS02 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4698 6qpt:C (1.9) BS02 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4699 6qpt:C (1.9) BS03 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4700 6qpt:D (1.9) BS01 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4701 6qpt:D (1.9) BS02 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4702 6qpt:E (1.9) BS02 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4703 6qpt:E (1.9) BS03 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4704 6qpt:F (1.9) BS02 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4705 6qpt:F (1.9) BS03 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4706 6qpu:A (2.25) BS01 CU 1.7.2.1 GO:0005507 ... U3G913 32051772
    4707 6qpu:A (2.25) BS02 CU 1.7.2.1 GO:0005507 ... U3G913 32051772
    4708 6qpu:B (2.25) BS01 CU 1.7.2.1 GO:0005507 ... U3G913 32051772
    4709 6qpu:B (2.25) BS02 CU 1.7.2.1 GO:0005507 ... U3G913 32051772
    4710 6qpu:C (2.25) BS01 CU 1.7.2.1 GO:0005507 ... U3G913 32051772
    4711 6qpu:C (2.25) BS02 CU 1.7.2.1 GO:0005507 ... U3G913 32051772
    4712 6qpu:D (2.25) BS01 CU 1.7.2.1 GO:0005507 ... U3G913 32051772
    4713 6qpu:D (2.25) BS02 CU 1.7.2.1 GO:0005507 ... U3G913 32051772
    4714 6qpu:E (2.25) BS01 CU 1.7.2.1 GO:0005507 ... U3G913 32051772
    4715 6qpu:E (2.25) BS02 CU 1.7.2.1 GO:0005507 ... U3G913 32051772
    4716 6qpu:F (2.25) BS01 CU 1.7.2.1 GO:0005507 ... U3G913 32051772
    4717 6qpu:F (2.25) BS02 CU 1.7.2.1 GO:0005507 ... U3G913 32051772
    4718 6qpv:A (1.6) BS01 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4719 6qpv:A (1.6) BS02 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4720 6qpv:I (1.6) BS01 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4721 6qpv:I (1.6) BS02 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4722 6qpx:A (1.7) BS01 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4723 6qpx:A (1.7) BS02 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4724 6qpx:I (1.7) BS01 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4725 6qpx:I (1.7) BS02 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4726 6qpz:A (1.65) BS01 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4727 6qpz:A (1.65) BS02 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4728 6qpz:I (1.65) BS01 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4729 6qpz:I (1.65) BS02 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4730 6qq0:A (1.4) BS01 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4731 6qq0:A (1.4) BS02 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4732 6qq1:A (1.75) BS01 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4733 6qq1:A (1.75) BS02 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4734 6qq2:A (2.6) BS01 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4735 6qq2:A (2.6) BS02 CU 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    4736 6qug:A (2.7) BS03 CU ? GO:0005515 ... I7MHJ5
    P0AEX9
    33263328
    4737 6qug:B (2.7) BS03 CU ? GO:0005515 ... I7MHJ5
    P0AEX9
    33263328
    4738 6qug:C (2.7) BS03 CU ? GO:0005515 ... I7MHJ5
    P0AEX9
    33263328
    4739 6qug:D (2.7) BS03 CU ? GO:0005515 ... I7MHJ5
    P0AEX9
    33263328
    4740 6qug:E (2.7) BS03 CU ? GO:0005515 ... I7MHJ5
    P0AEX9
    33263328
    4741 6qug:F (2.7) BS03 CU ? GO:0005515 ... I7MHJ5
    P0AEX9
    33263328
    4742 6qug:G (2.7) BS03 CU ? GO:0005515 ... I7MHJ5
    P0AEX9
    33263328
    4743 6qug:H (2.7) BS03 CU ? GO:0005515 ... I7MHJ5
    P0AEX9
    33263328
    4744 6qug:I (2.7) BS03 CU ? GO:0005515 ... I7MHJ5
    P0AEX9
    33263328
    4745 6qug:J (2.7) BS03 CU ? GO:0005515 ... I7MHJ5
    P0AEX9
    33263328
    4746 6qug:K (2.7) BS03 CU ? GO:0005515 ... I7MHJ5
    P0AEX9
    33263328
    4747 6qug:L (2.7) BS03 CU ? GO:0005515 ... I7MHJ5
    P0AEX9
    33263328
    4748 6quh:B (1.5) BS01 CU ? GO:0003674 ... P42212 33263328
    4749 6quh:B (1.5) BS02 CU ? GO:0003674 ... P42212 33263328
    4750 6quh:E (1.5) BS01 CU ? GO:0003674 ... P42212 33263328
    4751 6quh:E (1.5) BS02 CU ? GO:0003674 ... P42212 33263328
    4752 6qui:B (1.94) BS01 CU ? GO:0003674 ... P42212 33263328
    4753 6qui:E (1.94) BS01 CU ? GO:0003674 ... P42212 33263328
    4754 6quj:B (1.68) BS01 CU ? GO:0003674 ... P42212 33263328
    4755 6quj:E (1.68) BS01 CU ? GO:0003674 ... P42212 33263328
    4756 6qwg:A (1.9) BS02 CU 1.7.2.1 GO:0005507 ... P25006 31709063
    4757 6qwg:A (1.9) BS03 CU 1.7.2.1 GO:0005507 ... P25006 31709063
    4758 6qww:A (1.35) BS01 CU 3.2.1.17 GO:0003796 ... P00698 N/A
    4759 6qxd:A (2.317) BS01 CU ? GO:0016491 ... B2ZB02 31202126
    4760 6qxd:A (2.317) BS02 CU ? GO:0016491 ... B2ZB02 31202126
    4761 6qxd:B (2.317) BS01 CU ? GO:0016491 ... B2ZB02 31202126
    4762 6qxd:B (2.317) BS02 CU ? GO:0016491 ... B2ZB02 31202126
    4763 6rek:A (1.1) BS01 CU N/A N/A N/A 31321399
    4764 6rek:A (1.1) BS02 CU N/A N/A N/A 31321399
    4765 6rek:A (1.1) BS03 CU N/A N/A N/A 31321399
    4766 6rgh:A (1.08) BS01 CU 1.10.3.2 GO:0005507 ... I1VE66 31478903
    4767 6rgh:A (1.08) BS02 CU 1.10.3.2 GO:0005507 ... I1VE66 31478903
    4768 6rgh:A (1.08) BS03 CU 1.10.3.2 GO:0005507 ... I1VE66 31478903
    4769 6rgh:A (1.08) BS04 CU 1.10.3.2 GO:0005507 ... I1VE66 31478903
    4770 6rgp:A (0.97) BS01 CU 1.10.3.2 GO:0005507 ... I1VE66 31478903
    4771 6rgp:A (0.97) BS02 CU 1.10.3.2 GO:0005507 ... I1VE66 31478903
    4772 6rgp:A (0.97) BS03 CU 1.10.3.2 GO:0005507 ... I1VE66 31478903
    4773 6rgp:A (0.97) BS04 CU 1.10.3.2 GO:0005507 ... I1VE66 31478903
    4774 6rh9:A (1.85) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4775 6rh9:A (1.85) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4776 6rh9:A (1.85) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4777 6rh9:A (1.85) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4778 6rh9:B (1.85) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4779 6rh9:B (1.85) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4780 6rh9:B (1.85) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4781 6rh9:B (1.85) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4782 6rh9:C (1.85) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4783 6rh9:C (1.85) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4784 6rh9:C (1.85) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4785 6rh9:C (1.85) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4786 6rh9:D (1.85) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4787 6rh9:D (1.85) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4788 6rh9:D (1.85) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4789 6rh9:D (1.85) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4790 6rh9:E (1.85) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4791 6rh9:E (1.85) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4792 6rh9:E (1.85) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4793 6rh9:E (1.85) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4794 6rh9:F (1.85) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4795 6rh9:F (1.85) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4796 6rh9:F (1.85) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4797 6rh9:F (1.85) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4798 6rh9:G (1.85) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4799 6rh9:G (1.85) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802
    4800 6rh9:G (1.85) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 31261802

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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