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BioLiP
Download all results in tab-seperated text for 6639 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    2201 3re7:G (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2202 3re7:G (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2203 3re7:G (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2204 3re7:G (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2205 3re7:G (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2206 3re7:H (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2207 3re7:H (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2208 3re7:H (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2209 3re7:H (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2210 3re7:I (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2211 3re7:I (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2212 3re7:I (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2213 3re7:I (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2214 3re7:I (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2215 3re7:J (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2216 3re7:J (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2217 3re7:J (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2218 3re7:J (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2219 3re7:K (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2220 3re7:K (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2221 3re7:K (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2222 3re7:L (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2223 3re7:L (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2224 3re7:L (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2225 3re7:L (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2226 3re7:L (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2227 3re7:M (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2228 3re7:M (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2229 3re7:M (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2230 3re7:M (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2231 3re7:M (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2232 3re7:N (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2233 3re7:N (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2234 3re7:N (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2235 3re7:N (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2236 3re7:N (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2237 3re7:O (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2238 3re7:O (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2239 3re7:O (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2240 3re7:O (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2241 3re7:O (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2242 3re7:P (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2243 3re7:P (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2244 3re7:P (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2245 3re7:P (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2246 3re7:Q (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2247 3re7:Q (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2248 3re7:Q (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2249 3re7:Q (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2250 3re7:Q (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2251 3re7:R (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2252 3re7:R (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2253 3re7:R (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2254 3re7:R (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2255 3re7:R (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2256 3re7:S (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2257 3re7:S (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2258 3re7:S (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2259 3re7:S (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2260 3re7:T (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2261 3re7:T (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2262 3re7:T (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2263 3re7:U (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2264 3re7:U (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2265 3re7:U (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2266 3re7:U (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2267 3re7:V (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2268 3re7:V (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2269 3re7:V (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2270 3re7:V (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2271 3re7:V (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2272 3re7:V (2.82) BS06 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2273 3re7:W (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2274 3re7:W (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2275 3re7:W (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2276 3re7:W (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2277 3re7:W (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2278 3re7:W (2.82) BS06 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2279 3re7:X (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2280 3re7:X (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2281 3re7:X (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2282 3re7:X (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2283 3re7:X (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2284 3rfr:E (2.68) BS01 CU ? N/A Q9KX36 22013879
    2285 3rfr:I (2.68) BS01 CU ? N/A Q9KX36 22013879
    2286 3rgb:A (2.8) BS01 CU 1.14.18.3 N/A G1UBD1 22013879
    2287 3rgb:E (2.8) BS01 CU 1.14.18.3 N/A G1UBD1 22013879
    2288 3rgb:I (2.8) BS01 CU 1.14.18.3 N/A G1UBD1 22013879
    2289 3s0p:A (3.0) BS01 CU 1.15.1.1 GO:0005507 ... P14831 N/A
    2290 3s0p:B (3.0) BS01 CU 1.15.1.1 GO:0005507 ... P14831 N/A
    2291 3s0p:C (3.0) BS01 CU 1.15.1.1 GO:0005507 ... P14831 N/A
    2292 3s0p:D (3.0) BS01 CU 1.15.1.1 GO:0005507 ... P14831 N/A
    2293 3s0p:E (3.0) BS01 CU 1.15.1.1 GO:0005507 ... P14831 N/A
    2294 3s0p:F (3.0) BS01 CU 1.15.1.1 GO:0005507 ... P14831 N/A
    2295 3s0p:G (3.0) BS01 CU 1.15.1.1 GO:0005507 ... P14831 N/A
    2296 3s0p:H (3.0) BS01 CU 1.15.1.1 GO:0005507 ... P14831 N/A
    2297 3s33:A (4.45) BS01 CU 7.1.1.9 GO:0004129 ... Q5SJ79 22607023
    2298 3s38:A (4.2) BS01 CU 7.1.1.9 GO:0004129 ... Q5SJ79 22607023
    2299 3s39:A (4.8) BS01 CU 7.1.1.9 GO:0004129 ... Q5SJ79 22607023
    2300 3s3a:A (4.25) BS01 CU 7.1.1.9 GO:0004129 ... Q5SJ79 22607023
    2301 3s3b:A (3.3) BS01 CU 7.1.1.9 GO:0004129 ... Q5SJ79 22607023
    2302 3s3c:A (4.0) BS01 CU 7.1.1.9 GO:0004129 ... Q5SJ79 22607023
    2303 3s3d:A (3.75) BS01 CU 7.1.1.9 GO:0004129 ... Q5SJ79 22607023
    2304 3s8f:A (1.8) BS01 CU 7.1.1.9 GO:0004129 ... Q5SJ79 21814577
    2305 3s8g:A (1.8) BS03 CU 7.1.1.9 GO:0004129 ... Q5SJ79 21814577
    2306 3sb6:A (2.7) BS01 CU 3.2.1.17 GO:0003796 ... P00720 21898649
    2307 3sb6:A (2.7) BS02 CU 3.2.1.17 GO:0003796 ... P00720 21898649
    2308 3sb6:B (2.7) BS01 CU 3.2.1.17 GO:0003796 ... P00720 21898649
    2309 3sb6:B (2.7) BS02 CU 3.2.1.17 GO:0003796 ... P00720 21898649
    2310 3sb8:A (2.65) BS01 CU 3.2.1.17 GO:0003796 ... P00720 21898649
    2311 3sb8:B (2.65) BS01 CU 3.2.1.17 GO:0003796 ... P00720 21898649
    2312 3sb9:A (2.45) BS01 CU 3.2.1.17 GO:0003796 ... P00720 21898649
    2313 3sb9:B (2.45) BS01 CU 3.2.1.17 GO:0003796 ... P00720 21898649
    2314 3ses:A (1.9) BS03 CU ? GO:0005515 ... P0AEX9 21898649
    2315 3ses:C (1.9) BS03 CU ? GO:0005515 ... P0AEX9 21898649
    2316 3sod:B (2.1) BS01 CU 1.15.1.1 GO:0000209 ... P00442 2387847
    2317 3sod:G (2.1) BS01 CU 1.15.1.1 GO:0000209 ... P00442 2387847
    2318 3sod:O (2.1) BS01 CU 1.15.1.1 GO:0000209 ... P00442 2387847
    2319 3sod:Y (2.1) BS01 CU 1.15.1.1 GO:0000209 ... P00442 2387847
    2320 3sqr:A (1.67) BS02 CU 1.10.3.2 GO:0005507 ... H8ZRU2 25372682
    2321 3sqr:A (1.67) BS03 CU 1.10.3.2 GO:0005507 ... H8ZRU2 25372682
    2322 3sqr:A (1.67) BS04 CU 1.10.3.2 GO:0005507 ... H8ZRU2 25372682
    2323 3t53:A (3.37) BS01 CU ? GO:0005375 ... P38054 22683351
    2324 3t6q:A (1.9) BS02 CU ? GO:0002322 ... Q62192 21959264
    2325 3t6v:A (2.0) BS01 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2326 3t6v:A (2.0) BS02 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2327 3t6v:A (2.0) BS03 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2328 3t6v:A (2.0) BS04 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2329 3t6v:B (2.0) BS01 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2330 3t6v:B (2.0) BS02 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2331 3t6v:B (2.0) BS03 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2332 3t6v:B (2.0) BS04 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2333 3t6v:C (2.0) BS01 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2334 3t6v:C (2.0) BS02 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2335 3t6v:C (2.0) BS03 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2336 3t6v:C (2.0) BS04 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2337 3t6w:A (2.15) BS01 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2338 3t6w:A (2.15) BS02 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2339 3t6w:A (2.15) BS03 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2340 3t6w:A (2.15) BS04 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2341 3t6w:B (2.15) BS01 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2342 3t6w:B (2.15) BS02 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2343 3t6w:B (2.15) BS03 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2344 3t6w:B (2.15) BS04 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2345 3t6w:C (2.15) BS01 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2346 3t6w:C (2.15) BS02 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2347 3t6w:C (2.15) BS03 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2348 3t6w:C (2.15) BS04 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2349 3t6x:A (2.15) BS01 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2350 3t6x:A (2.15) BS02 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2351 3t6x:A (2.15) BS03 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2352 3t6x:A (2.15) BS04 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2353 3t6x:B (2.15) BS01 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2354 3t6x:B (2.15) BS02 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2355 3t6x:B (2.15) BS03 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2356 3t6x:B (2.15) BS04 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2357 3t6x:C (2.15) BS01 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2358 3t6x:C (2.15) BS02 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2359 3t6x:C (2.15) BS03 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2360 3t6x:C (2.15) BS04 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2361 3t6z:A (2.15) BS01 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2362 3t6z:A (2.15) BS02 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2363 3t6z:A (2.15) BS03 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2364 3t6z:A (2.15) BS04 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2365 3t6z:B (2.15) BS01 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2366 3t6z:B (2.15) BS02 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2367 3t6z:B (2.15) BS03 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2368 3t6z:B (2.15) BS04 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2369 3t6z:C (2.15) BS01 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2370 3t6z:C (2.15) BS02 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2371 3t6z:C (2.15) BS03 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2372 3t6z:C (2.15) BS04 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2373 3t71:A (2.15) BS01 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2374 3t71:A (2.15) BS02 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2375 3t71:A (2.15) BS03 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2376 3t71:A (2.15) BS04 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2377 3t71:B (2.15) BS01 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2378 3t71:B (2.15) BS02 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2379 3t71:B (2.15) BS03 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2380 3t71:B (2.15) BS04 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2381 3t71:C (2.15) BS01 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2382 3t71:C (2.15) BS02 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2383 3t71:C (2.15) BS03 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2384 3t71:C (2.15) BS04 CU 1.10.3.2 GO:0005507 ... I1SB14 22341982
    2385 3t9w:A (1.5) BS01 CU 1.10.3.2 GO:0005507 ... J9PBQ8 24870309
    2386 3t9w:A (1.5) BS02 CU 1.10.3.2 GO:0005507 ... J9PBQ8 24870309
    2387 3t9w:A (1.5) BS03 CU 1.10.3.2 GO:0005507 ... J9PBQ8 24870309
    2388 3ta4:D (2.35) BS01 CU 1.10.3.2 GO:0005507 ... J9PBQ8 24870309
    2389 3ta4:D (2.35) BS02 CU 1.10.3.2 GO:0005507 ... J9PBQ8 24870309
    2390 3ta4:D (2.35) BS03 CU 1.10.3.2 GO:0005507 ... J9PBQ8 24870309
    2391 3ta4:D (2.35) BS04 CU 1.10.3.2 GO:0005507 ... J9PBQ8 24870309
    2392 3ta4:D (2.35) BS05 CU 1.10.3.2 GO:0005507 ... J9PBQ8 24870309
    2393 3ta4:E (2.35) BS02 CU 1.10.3.2 GO:0005507 ... J9PBQ8 24870309
    2394 3ta4:E (2.35) BS03 CU 1.10.3.2 GO:0005507 ... J9PBQ8 24870309
    2395 3ta4:E (2.35) BS04 CU 1.10.3.2 GO:0005507 ... J9PBQ8 24870309
    2396 3ta4:E (2.35) BS05 CU 1.10.3.2 GO:0005507 ... J9PBQ8 24870309
    2397 3ta4:F (2.35) BS01 CU 1.10.3.2 GO:0005507 ... J9PBQ8 24870309
    2398 3ta4:F (2.35) BS02 CU 1.10.3.2 GO:0005507 ... J9PBQ8 24870309
    2399 3ta4:F (2.35) BS03 CU 1.10.3.2 GO:0005507 ... J9PBQ8 24870309
    2400 3ta4:F (2.35) BS04 CU 1.10.3.2 GO:0005507 ... J9PBQ8 24870309

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218