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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    12401 6jlu:C (3.02) BS17 CLA N/A GO:0009521 ... N/A 31371578
    12402 6jlu:D (3.02) BS02 CLA N/A GO:0009523 ... N/A 31371578
    12403 6jlu:D (3.02) BS04 CLA N/A GO:0009523 ... N/A 31371578
    12404 6jlu:D (3.02) BS05 CLA N/A GO:0009523 ... N/A 31371578
    12405 6jlu:D (3.02) BS07 CLA N/A GO:0009523 ... N/A 31371578
    12406 6jlu:D (3.02) BS08 CLA N/A GO:0009523 ... N/A 31371578
    12407 6jlu:H (3.02) BS01 CLA ? GO:0009507 ... B7XBY7 31371578
    12408 6jlu:H (3.02) BS02 CLA ? GO:0009507 ... B7XBY7 31371578
    12409 6jlu:H (3.02) BS03 CLA ? GO:0009507 ... B7XBY7 31371578
    12410 6jlu:I (3.02) BS01 CLA N/A GO:0009523 ... N/A 31371578
    12411 6jlu:I (3.02) BS02 CLA N/A GO:0009523 ... N/A 31371578
    12412 6jlu:I (3.02) BS03 CLA N/A GO:0009523 ... N/A 31371578
    12413 6jlu:K (3.02) BS01 CLA N/A GO:0009523 ... N/A 31371578
    12414 6jlu:K (3.02) BS02 CLA N/A GO:0009523 ... N/A 31371578
    12415 6jlu:N (3.02) BS01 CLA N/A N/A N/A 31371578
    12416 6jlu:P (3.02) BS01 CLA N/A GO:0009765 ... N/A 31371578
    12417 6jlu:P (3.02) BS02 CLA N/A GO:0009765 ... N/A 31371578
    12418 6jlu:P (3.02) BS03 CLA N/A GO:0009765 ... N/A 31371578
    12419 6jlu:P (3.02) BS04 CLA N/A GO:0009765 ... N/A 31371578
    12420 6jlu:P (3.02) BS05 CLA N/A GO:0009765 ... N/A 31371578
    12421 6jlu:P (3.02) BS06 CLA N/A GO:0009765 ... N/A 31371578
    12422 6jlu:P (3.02) BS07 CLA N/A GO:0009765 ... N/A 31371578
    12423 6jlu:P (3.02) BS08 CLA N/A GO:0009765 ... N/A 31371578
    12424 6jlu:P (3.02) BS10 CLA N/A GO:0009765 ... N/A 31371578
    12425 6jlu:W (3.02) BS01 CLA N/A GO:0009523 ... N/A 31371578
    12426 6jlu:X (3.02) BS01 CLA ? GO:0009507 ... B6ZHF2 31371578
    12427 6jlu:Z (3.02) BS01 CLA N/A GO:0009523 ... N/A 31371578
    12428 6jlu:Z (3.02) BS02 CLA N/A GO:0009523 ... N/A 31371578
    12429 6jlu:a (3.02) BS03 CLA N/A GO:0009055 ... N/A 31371578
    12430 6jlu:a (3.02) BS04 CLA N/A GO:0009055 ... N/A 31371578
    12431 6jlu:a (3.02) BS06 CLA N/A GO:0009055 ... N/A 31371578
    12432 6jlu:a (3.02) BS07 CLA N/A GO:0009055 ... N/A 31371578
    12433 6jlu:a (3.02) BS08 CLA N/A GO:0009055 ... N/A 31371578
    12434 6jlu:b (3.02) BS01 CLA N/A GO:0009521 ... N/A 31371578
    12435 6jlu:b (3.02) BS02 CLA N/A GO:0009521 ... N/A 31371578
    12436 6jlu:b (3.02) BS03 CLA N/A GO:0009521 ... N/A 31371578
    12437 6jlu:b (3.02) BS04 CLA N/A GO:0009521 ... N/A 31371578
    12438 6jlu:b (3.02) BS05 CLA N/A GO:0009521 ... N/A 31371578
    12439 6jlu:b (3.02) BS06 CLA N/A GO:0009521 ... N/A 31371578
    12440 6jlu:b (3.02) BS07 CLA N/A GO:0009521 ... N/A 31371578
    12441 6jlu:b (3.02) BS08 CLA N/A GO:0009521 ... N/A 31371578
    12442 6jlu:b (3.02) BS09 CLA N/A GO:0009521 ... N/A 31371578
    12443 6jlu:b (3.02) BS10 CLA N/A GO:0009521 ... N/A 31371578
    12444 6jlu:b (3.02) BS11 CLA N/A GO:0009521 ... N/A 31371578
    12445 6jlu:b (3.02) BS12 CLA N/A GO:0009521 ... N/A 31371578
    12446 6jlu:b (3.02) BS13 CLA N/A GO:0009521 ... N/A 31371578
    12447 6jlu:b (3.02) BS14 CLA N/A GO:0009521 ... N/A 31371578
    12448 6jlu:b (3.02) BS15 CLA N/A GO:0009521 ... N/A 31371578
    12449 6jlu:c (3.02) BS01 CLA N/A GO:0009521 ... N/A 31371578
    12450 6jlu:c (3.02) BS02 CLA N/A GO:0009521 ... N/A 31371578
    12451 6jlu:c (3.02) BS04 CLA N/A GO:0009521 ... N/A 31371578
    12452 6jlu:c (3.02) BS05 CLA N/A GO:0009521 ... N/A 31371578
    12453 6jlu:c (3.02) BS06 CLA N/A GO:0009521 ... N/A 31371578
    12454 6jlu:c (3.02) BS07 CLA N/A GO:0009521 ... N/A 31371578
    12455 6jlu:c (3.02) BS08 CLA N/A GO:0009521 ... N/A 31371578
    12456 6jlu:c (3.02) BS09 CLA N/A GO:0009521 ... N/A 31371578
    12457 6jlu:c (3.02) BS10 CLA N/A GO:0009521 ... N/A 31371578
    12458 6jlu:c (3.02) BS11 CLA N/A GO:0009521 ... N/A 31371578
    12459 6jlu:c (3.02) BS12 CLA N/A GO:0009521 ... N/A 31371578
    12460 6jlu:c (3.02) BS13 CLA N/A GO:0009521 ... N/A 31371578
    12461 6jlu:c (3.02) BS14 CLA N/A GO:0009521 ... N/A 31371578
    12462 6jlu:c (3.02) BS15 CLA N/A GO:0009521 ... N/A 31371578
    12463 6jlu:c (3.02) BS16 CLA N/A GO:0009521 ... N/A 31371578
    12464 6jlu:c (3.02) BS17 CLA N/A GO:0009521 ... N/A 31371578
    12465 6jlu:c (3.02) BS18 CLA N/A GO:0009521 ... N/A 31371578
    12466 6jlu:d (3.02) BS02 CLA N/A GO:0009523 ... N/A 31371578
    12467 6jlu:d (3.02) BS04 CLA N/A GO:0009523 ... N/A 31371578
    12468 6jlu:d (3.02) BS05 CLA N/A GO:0009523 ... N/A 31371578
    12469 6jlu:d (3.02) BS07 CLA N/A GO:0009523 ... N/A 31371578
    12470 6jlu:d (3.02) BS08 CLA N/A GO:0009523 ... N/A 31371578
    12471 6jlu:h (3.02) BS01 CLA ? GO:0009507 ... B7XBY7 31371578
    12472 6jlu:h (3.02) BS02 CLA ? GO:0009507 ... B7XBY7 31371578
    12473 6jlu:h (3.02) BS03 CLA ? GO:0009507 ... B7XBY7 31371578
    12474 6jlu:h (3.02) BS04 CLA ? GO:0009507 ... B7XBY7 31371578
    12475 6jlu:i (3.02) BS01 CLA N/A GO:0009523 ... N/A 31371578
    12476 6jlu:i (3.02) BS02 CLA N/A GO:0009523 ... N/A 31371578
    12477 6jlu:i (3.02) BS03 CLA N/A GO:0009523 ... N/A 31371578
    12478 6jlu:k (3.02) BS01 CLA N/A GO:0009523 ... N/A 31371578
    12479 6jlu:k (3.02) BS02 CLA N/A GO:0009523 ... N/A 31371578
    12480 6jlu:n (3.02) BS01 CLA N/A N/A N/A 31371578
    12481 6jlu:p (3.02) BS01 CLA N/A GO:0009765 ... N/A 31371578
    12482 6jlu:p (3.02) BS02 CLA N/A GO:0009765 ... N/A 31371578
    12483 6jlu:p (3.02) BS03 CLA N/A GO:0009765 ... N/A 31371578
    12484 6jlu:p (3.02) BS04 CLA N/A GO:0009765 ... N/A 31371578
    12485 6jlu:p (3.02) BS05 CLA N/A GO:0009765 ... N/A 31371578
    12486 6jlu:p (3.02) BS06 CLA N/A GO:0009765 ... N/A 31371578
    12487 6jlu:p (3.02) BS07 CLA N/A GO:0009765 ... N/A 31371578
    12488 6jlu:p (3.02) BS08 CLA N/A GO:0009765 ... N/A 31371578
    12489 6jlu:p (3.02) BS10 CLA N/A GO:0009765 ... N/A 31371578
    12490 6jlu:w (3.02) BS01 CLA N/A GO:0009523 ... N/A 31371578
    12491 6jlu:x (3.02) BS01 CLA ? GO:0009507 ... B6ZHF2 31371578
    12492 6jlu:y (3.02) BS01 CLA N/A GO:0009523 ... N/A 31371578
    12493 6jlu:z (3.02) BS01 CLA N/A GO:0009523 ... N/A 31371578
    12494 6jlu:z (3.02) BS02 CLA N/A GO:0009523 ... N/A 31371578
    12495 6jo5:1 (2.9) BS02 CLA ? GO:0009765 ... Q05093 31182847
    12496 6jo5:1 (2.9) BS03 CLA ? GO:0009765 ... Q05093 31182847
    12497 6jo5:1 (2.9) BS04 CLA ? GO:0009765 ... Q05093 31182847
    12498 6jo5:1 (2.9) BS05 CLA ? GO:0009765 ... Q05093 31182847
    12499 6jo5:1 (2.9) BS07 CLA ? GO:0009765 ... Q05093 31182847
    12500 6jo5:1 (2.9) BS08 CLA ? GO:0009765 ... Q05093 31182847
    12501 6jo5:1 (2.9) BS09 CLA ? GO:0009765 ... Q05093 31182847
    12502 6jo5:1 (2.9) BS10 CLA ? GO:0009765 ... Q05093 31182847
    12503 6jo5:1 (2.9) BS11 CLA ? GO:0009765 ... Q05093 31182847
    12504 6jo5:1 (2.9) BS12 CLA ? GO:0009765 ... Q05093 31182847
    12505 6jo5:1 (2.9) BS13 CLA ? GO:0009765 ... Q05093 31182847
    12506 6jo5:2 (2.9) BS01 CLA ? GO:0009416 ... A8IKC8 31182847
    12507 6jo5:2 (2.9) BS02 CLA ? GO:0009416 ... A8IKC8 31182847
    12508 6jo5:2 (2.9) BS03 CLA ? GO:0009416 ... A8IKC8 31182847
    12509 6jo5:2 (2.9) BS04 CLA ? GO:0009416 ... A8IKC8 31182847
    12510 6jo5:2 (2.9) BS05 CLA ? GO:0009416 ... A8IKC8 31182847
    12511 6jo5:2 (2.9) BS06 CLA ? GO:0009416 ... A8IKC8 31182847
    12512 6jo5:2 (2.9) BS07 CLA ? GO:0009416 ... A8IKC8 31182847
    12513 6jo5:2 (2.9) BS08 CLA ? GO:0009416 ... A8IKC8 31182847
    12514 6jo5:2 (2.9) BS09 CLA ? GO:0009416 ... A8IKC8 31182847
    12515 6jo5:3 (2.9) BS01 CLA N/A GO:0009765 ... N/A 31182847
    12516 6jo5:3 (2.9) BS02 CLA N/A GO:0009765 ... N/A 31182847
    12517 6jo5:3 (2.9) BS03 CLA N/A GO:0009765 ... N/A 31182847
    12518 6jo5:3 (2.9) BS04 CLA N/A GO:0009765 ... N/A 31182847
    12519 6jo5:3 (2.9) BS05 CLA N/A GO:0009765 ... N/A 31182847
    12520 6jo5:3 (2.9) BS06 CLA N/A GO:0009765 ... N/A 31182847
    12521 6jo5:3 (2.9) BS07 CLA N/A GO:0009765 ... N/A 31182847
    12522 6jo5:3 (2.9) BS09 CLA N/A GO:0009765 ... N/A 31182847
    12523 6jo5:3 (2.9) BS10 CLA N/A GO:0009765 ... N/A 31182847
    12524 6jo5:3 (2.9) BS11 CLA N/A GO:0009765 ... N/A 31182847
    12525 6jo5:3 (2.9) BS12 CLA N/A GO:0009765 ... N/A 31182847
    12526 6jo5:3 (2.9) BS13 CLA N/A GO:0009765 ... N/A 31182847
    12527 6jo5:3 (2.9) BS14 CLA N/A GO:0009765 ... N/A 31182847
    12528 6jo5:3 (2.9) BS15 CLA N/A GO:0009765 ... N/A 31182847
    12529 6jo5:3 (2.9) BS16 CLA N/A GO:0009765 ... N/A 31182847
    12530 6jo5:4 (2.9) BS02 CLA ? GO:0009765 ... Q75VZ0 31182847
    12531 6jo5:4 (2.9) BS03 CLA ? GO:0009765 ... Q75VZ0 31182847
    12532 6jo5:4 (2.9) BS04 CLA ? GO:0009765 ... Q75VZ0 31182847
    12533 6jo5:4 (2.9) BS05 CLA ? GO:0009765 ... Q75VZ0 31182847
    12534 6jo5:4 (2.9) BS09 CLA ? GO:0009765 ... Q75VZ0 31182847
    12535 6jo5:4 (2.9) BS10 CLA ? GO:0009765 ... Q75VZ0 31182847
    12536 6jo5:4 (2.9) BS11 CLA ? GO:0009765 ... Q75VZ0 31182847
    12537 6jo5:4 (2.9) BS12 CLA ? GO:0009765 ... Q75VZ0 31182847
    12538 6jo5:4 (2.9) BS13 CLA ? GO:0009765 ... Q75VZ0 31182847
    12539 6jo5:4 (2.9) BS14 CLA ? GO:0009765 ... Q75VZ0 31182847
    12540 6jo5:4 (2.9) BS15 CLA ? GO:0009765 ... Q75VZ0 31182847
    12541 6jo5:5 (2.9) BS01 CLA ? GO:0009765 ... Q75VY8 31182847
    12542 6jo5:5 (2.9) BS02 CLA ? GO:0009765 ... Q75VY8 31182847
    12543 6jo5:5 (2.9) BS03 CLA ? GO:0009765 ... Q75VY8 31182847
    12544 6jo5:5 (2.9) BS04 CLA ? GO:0009765 ... Q75VY8 31182847
    12545 6jo5:5 (2.9) BS05 CLA ? GO:0009765 ... Q75VY8 31182847
    12546 6jo5:5 (2.9) BS06 CLA ? GO:0009765 ... Q75VY8 31182847
    12547 6jo5:5 (2.9) BS09 CLA ? GO:0009765 ... Q75VY8 31182847
    12548 6jo5:5 (2.9) BS10 CLA ? GO:0009765 ... Q75VY8 31182847
    12549 6jo5:5 (2.9) BS11 CLA ? GO:0009765 ... Q75VY8 31182847
    12550 6jo5:5 (2.9) BS12 CLA ? GO:0009765 ... Q75VY8 31182847
    12551 6jo5:5 (2.9) BS13 CLA ? GO:0009765 ... Q75VY8 31182847
    12552 6jo5:5 (2.9) BS14 CLA ? GO:0009765 ... Q75VY8 31182847
    12553 6jo5:5 (2.9) BS15 CLA ? GO:0009765 ... Q75VY8 31182847
    12554 6jo5:5 (2.9) BS16 CLA ? GO:0009765 ... Q75VY8 31182847
    12555 6jo5:5 (2.9) BS18 CLA ? GO:0009765 ... Q75VY8 31182847
    12556 6jo5:5 (2.9) BS19 CLA ? GO:0009765 ... Q75VY8 31182847
    12557 6jo5:5 (2.9) BS20 CLA ? GO:0009765 ... Q75VY8 31182847
    12558 6jo5:6 (2.9) BS01 CLA ? GO:0009416 ... Q75VY6 31182847
    12559 6jo5:6 (2.9) BS02 CLA ? GO:0009416 ... Q75VY6 31182847
    12560 6jo5:6 (2.9) BS03 CLA ? GO:0009416 ... Q75VY6 31182847
    12561 6jo5:6 (2.9) BS04 CLA ? GO:0009416 ... Q75VY6 31182847
    12562 6jo5:6 (2.9) BS05 CLA ? GO:0009416 ... Q75VY6 31182847
    12563 6jo5:6 (2.9) BS06 CLA ? GO:0009416 ... Q75VY6 31182847
    12564 6jo5:6 (2.9) BS07 CLA ? GO:0009416 ... Q75VY6 31182847
    12565 6jo5:6 (2.9) BS11 CLA ? GO:0009416 ... Q75VY6 31182847
    12566 6jo5:6 (2.9) BS12 CLA ? GO:0009416 ... Q75VY6 31182847
    12567 6jo5:6 (2.9) BS13 CLA ? GO:0009416 ... Q75VY6 31182847
    12568 6jo5:6 (2.9) BS14 CLA ? GO:0009416 ... Q75VY6 31182847
    12569 6jo5:6 (2.9) BS15 CLA ? GO:0009416 ... Q75VY6 31182847
    12570 6jo5:6 (2.9) BS16 CLA ? GO:0009416 ... Q75VY6 31182847
    12571 6jo5:6 (2.9) BS17 CLA ? GO:0009416 ... Q75VY6 31182847
    12572 6jo5:6 (2.9) BS18 CLA ? GO:0009416 ... Q75VY6 31182847
    12573 6jo5:6 (2.9) BS20 CLA ? GO:0009416 ... Q75VY6 31182847
    12574 6jo5:7 (2.9) BS01 CLA ? GO:0009765 ... Q84Y02 31182847
    12575 6jo5:7 (2.9) BS02 CLA ? GO:0009765 ... Q84Y02 31182847
    12576 6jo5:7 (2.9) BS03 CLA ? GO:0009765 ... Q84Y02 31182847
    12577 6jo5:7 (2.9) BS04 CLA ? GO:0009765 ... Q84Y02 31182847
    12578 6jo5:7 (2.9) BS05 CLA ? GO:0009765 ... Q84Y02 31182847
    12579 6jo5:7 (2.9) BS07 CLA ? GO:0009765 ... Q84Y02 31182847
    12580 6jo5:7 (2.9) BS08 CLA ? GO:0009765 ... Q84Y02 31182847
    12581 6jo5:7 (2.9) BS09 CLA ? GO:0009765 ... Q84Y02 31182847
    12582 6jo5:7 (2.9) BS10 CLA ? GO:0009765 ... Q84Y02 31182847
    12583 6jo5:7 (2.9) BS11 CLA ? GO:0009765 ... Q84Y02 31182847
    12584 6jo5:7 (2.9) BS12 CLA ? GO:0009765 ... Q84Y02 31182847
    12585 6jo5:7 (2.9) BS13 CLA ? GO:0009765 ... Q84Y02 31182847
    12586 6jo5:7 (2.9) BS14 CLA ? GO:0009765 ... Q84Y02 31182847
    12587 6jo5:7 (2.9) BS15 CLA ? GO:0009765 ... Q84Y02 31182847
    12588 6jo5:7 (2.9) BS16 CLA ? GO:0009765 ... Q84Y02 31182847
    12589 6jo5:7 (2.9) BS17 CLA ? GO:0009765 ... Q84Y02 31182847
    12590 6jo5:8 (2.9) BS02 CLA ? GO:0009765 ... Q75VY7 31182847
    12591 6jo5:8 (2.9) BS03 CLA ? GO:0009765 ... Q75VY7 31182847
    12592 6jo5:8 (2.9) BS04 CLA ? GO:0009765 ... Q75VY7 31182847
    12593 6jo5:8 (2.9) BS05 CLA ? GO:0009765 ... Q75VY7 31182847
    12594 6jo5:8 (2.9) BS07 CLA ? GO:0009765 ... Q75VY7 31182847
    12595 6jo5:8 (2.9) BS08 CLA ? GO:0009765 ... Q75VY7 31182847
    12596 6jo5:8 (2.9) BS09 CLA ? GO:0009765 ... Q75VY7 31182847
    12597 6jo5:8 (2.9) BS10 CLA ? GO:0009765 ... Q75VY7 31182847
    12598 6jo5:8 (2.9) BS11 CLA ? GO:0009765 ... Q75VY7 31182847
    12599 6jo5:8 (2.9) BS12 CLA ? GO:0009765 ... Q75VY7 31182847
    12600 6jo5:8 (2.9) BS13 CLA ? GO:0009765 ... Q75VY7 31182847

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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