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BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1001 2wsf:2 (3.48) BS05 CLA ? GO:0009416 ... Q41038 19923216
    1002 2wsf:2 (3.48) BS06 CLA ? GO:0009416 ... Q41038 19923216
    1003 2wsf:2 (3.48) BS07 CLA ? GO:0009416 ... Q41038 19923216
    1004 2wsf:3 (3.48) BS01 CLA ? GO:0009507 ... C6TEX2 19923216
    1005 2wsf:3 (3.48) BS02 CLA ? GO:0009507 ... C6TEX2 19923216
    1006 2wsf:3 (3.48) BS03 CLA ? GO:0009507 ... C6TEX2 19923216
    1007 2wsf:3 (3.48) BS04 CLA ? GO:0009507 ... C6TEX2 19923216
    1008 2wsf:4 (3.48) BS01 CLA ? GO:0009416 ... Q9SQL2 19923216
    1009 2wsf:4 (3.48) BS02 CLA ? GO:0009416 ... Q9SQL2 19923216
    1010 2wsf:4 (3.48) BS03 CLA ? GO:0009416 ... Q9SQL2 19923216
    1011 2wsf:4 (3.48) BS04 CLA ? GO:0009416 ... Q9SQL2 19923216
    1012 2wsf:4 (3.48) BS05 CLA ? GO:0009416 ... Q9SQL2 19923216
    1013 2wsf:4 (3.48) BS06 CLA ? GO:0009416 ... Q9SQL2 19923216
    1014 2wsf:4 (3.48) BS07 CLA ? GO:0009416 ... Q9SQL2 19923216
    1015 2wsf:4 (3.48) BS08 CLA ? GO:0009416 ... Q9SQL2 19923216
    1016 2wsf:4 (3.48) BS09 CLA ? GO:0009416 ... Q9SQL2 19923216
    1017 2wsf:4 (3.48) BS10 CLA ? GO:0009416 ... Q9SQL2 19923216
    1018 2wsf:4 (3.48) BS11 CLA ? GO:0009416 ... Q9SQL2 19923216
    1019 2wsf:A (3.48) BS01 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1020 2wsf:A (3.48) BS02 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1021 2wsf:A (3.48) BS03 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1022 2wsf:A (3.48) BS04 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1023 2wsf:A (3.48) BS05 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1024 2wsf:A (3.48) BS06 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1025 2wsf:A (3.48) BS07 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1026 2wsf:A (3.48) BS08 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1027 2wsf:A (3.48) BS09 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1028 2wsf:A (3.48) BS10 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1029 2wsf:A (3.48) BS11 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1030 2wsf:A (3.48) BS12 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1031 2wsf:A (3.48) BS13 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1032 2wsf:A (3.48) BS14 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1033 2wsf:A (3.48) BS15 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1034 2wsf:A (3.48) BS16 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1035 2wsf:A (3.48) BS17 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1036 2wsf:A (3.48) BS18 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1037 2wsf:A (3.48) BS19 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1038 2wsf:A (3.48) BS20 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1039 2wsf:A (3.48) BS21 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1040 2wsf:A (3.48) BS22 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1041 2wsf:A (3.48) BS23 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1042 2wsf:A (3.48) BS24 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1043 2wsf:A (3.48) BS25 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1044 2wsf:A (3.48) BS26 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1045 2wsf:A (3.48) BS27 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1046 2wsf:A (3.48) BS28 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1047 2wsf:A (3.48) BS29 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1048 2wsf:A (3.48) BS30 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1049 2wsf:A (3.48) BS31 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1050 2wsf:A (3.48) BS32 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1051 2wsf:A (3.48) BS33 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1052 2wsf:A (3.48) BS34 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1053 2wsf:A (3.48) BS35 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1054 2wsf:A (3.48) BS37 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1055 2wsf:A (3.48) BS38 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1056 2wsf:A (3.48) BS39 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1057 2wsf:A (3.48) BS41 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1058 2wsf:A (3.48) BS42 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1059 2wsf:A (3.48) BS43 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1060 2wsf:A (3.48) BS44 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1061 2wsf:A (3.48) BS45 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    1062 2wsf:B (3.48) BS01 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1063 2wsf:B (3.48) BS02 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1064 2wsf:B (3.48) BS03 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1065 2wsf:B (3.48) BS05 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1066 2wsf:B (3.48) BS06 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1067 2wsf:B (3.48) BS07 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1068 2wsf:B (3.48) BS08 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1069 2wsf:B (3.48) BS09 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1070 2wsf:B (3.48) BS10 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1071 2wsf:B (3.48) BS11 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1072 2wsf:B (3.48) BS12 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1073 2wsf:B (3.48) BS13 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1074 2wsf:B (3.48) BS14 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1075 2wsf:B (3.48) BS15 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1076 2wsf:B (3.48) BS16 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1077 2wsf:B (3.48) BS17 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1078 2wsf:B (3.48) BS18 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1079 2wsf:B (3.48) BS19 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1080 2wsf:B (3.48) BS20 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1081 2wsf:B (3.48) BS21 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1082 2wsf:B (3.48) BS22 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1083 2wsf:B (3.48) BS23 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1084 2wsf:B (3.48) BS24 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1085 2wsf:B (3.48) BS25 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1086 2wsf:B (3.48) BS26 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1087 2wsf:B (3.48) BS27 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1088 2wsf:B (3.48) BS28 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1089 2wsf:B (3.48) BS29 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1090 2wsf:B (3.48) BS30 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1091 2wsf:B (3.48) BS31 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1092 2wsf:B (3.48) BS32 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1093 2wsf:B (3.48) BS33 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1094 2wsf:B (3.48) BS34 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1095 2wsf:B (3.48) BS35 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1096 2wsf:B (3.48) BS36 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1097 2wsf:B (3.48) BS37 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1098 2wsf:B (3.48) BS38 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1099 2wsf:B (3.48) BS39 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1100 2wsf:B (3.48) BS40 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1101 2wsf:B (3.48) BS41 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1102 2wsf:B (3.48) BS42 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1103 2wsf:B (3.48) BS43 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1104 2wsf:B (3.48) BS45 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1105 2wsf:B (3.48) BS46 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1106 2wsf:B (3.48) BS47 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1107 2wsf:B (3.48) BS48 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1108 2wsf:B (3.48) BS49 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    1109 2wsf:F (3.48) BS01 CLA ? GO:0009507 ... P12355 19923216
    1110 2wsf:F (3.48) BS02 CLA ? GO:0009507 ... P12355 19923216
    1111 2wsf:F (3.48) BS03 CLA ? GO:0009507 ... P12355 19923216
    1112 2wsf:F (3.48) BS04 CLA ? GO:0009507 ... P12355 19923216
    1113 2wsf:F (3.48) BS05 CLA ? GO:0009507 ... P12355 19923216
    1114 2wsf:G (3.48) BS01 CLA ? GO:0009507 ... P12357 19923216
    1115 2wsf:G (3.48) BS02 CLA ? GO:0009507 ... P12357 19923216
    1116 2wsf:H (3.48) BS02 CLA ? GO:0009507 ... P22179 19923216
    1117 2wsf:H (3.48) BS03 CLA ? GO:0009507 ... P22179 19923216
    1118 2wsf:I (3.48) BS01 CLA ? GO:0009507 ... P17227 19923216
    1119 2wsf:I (3.48) BS02 CLA ? GO:0009507 ... P17227 19923216
    1120 2wsf:I (3.48) BS03 CLA ? GO:0009507 ... P17227 19923216
    1121 2wsf:I (3.48) BS04 CLA ? GO:0009507 ... P17227 19923216
    1122 2wsf:J (3.48) BS01 CLA ? GO:0009507 ... P17230 19923216
    1123 2wsf:L (3.48) BS01 CLA ? GO:0009507 ... Q41385 19923216
    1124 2wsf:L (3.48) BS02 CLA ? GO:0009507 ... Q41385 19923216
    1125 2wsf:L (3.48) BS03 CLA ? GO:0009507 ... Q41385 19923216
    1126 2wsf:L (3.48) BS04 CLA ? GO:0009507 ... Q41385 19923216
    1127 2wsf:L (3.48) BS05 CLA ? GO:0009507 ... Q41385 19923216
    1128 2wsf:L (3.48) BS06 CLA ? GO:0009507 ... Q41385 19923216
    1129 2wsf:L (3.48) BS07 CLA ? GO:0009507 ... Q41385 19923216
    1130 2wsf:L (3.48) BS08 CLA ? GO:0009507 ... Q41385 19923216
    1131 2wsf:L (3.48) BS09 CLA ? GO:0009507 ... Q41385 19923216
    1132 2wsf:L (3.48) BS10 CLA ? GO:0009507 ... Q41385 19923216
    1133 2zt9:A (3.0) BS05 CLA ? GO:0009055 ... P0A384 19189962
    1134 2zt9:B (3.0) BS02 CLA ? GO:0009055 ... Q93SX1 19189962
    1135 3a0b:A (3.7) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    1136 3a0b:A (3.7) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    1137 3a0b:A (3.7) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    1138 3a0b:A (3.7) BS09 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    1139 3a0b:A (3.7) BS10 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    1140 3a0b:B (3.7) BS01 CLA ? GO:0009521 ... D0VWR1 19433803
    1141 3a0b:B (3.7) BS02 CLA ? GO:0009521 ... D0VWR1 19433803
    1142 3a0b:B (3.7) BS03 CLA ? GO:0009521 ... D0VWR1 19433803
    1143 3a0b:B (3.7) BS04 CLA ? GO:0009521 ... D0VWR1 19433803
    1144 3a0b:B (3.7) BS05 CLA ? GO:0009521 ... D0VWR1 19433803
    1145 3a0b:B (3.7) BS06 CLA ? GO:0009521 ... D0VWR1 19433803
    1146 3a0b:B (3.7) BS07 CLA ? GO:0009521 ... D0VWR1 19433803
    1147 3a0b:B (3.7) BS08 CLA ? GO:0009521 ... D0VWR1 19433803
    1148 3a0b:B (3.7) BS09 CLA ? GO:0009521 ... D0VWR1 19433803
    1149 3a0b:B (3.7) BS10 CLA ? GO:0009521 ... D0VWR1 19433803
    1150 3a0b:B (3.7) BS11 CLA ? GO:0009521 ... D0VWR1 19433803
    1151 3a0b:B (3.7) BS12 CLA ? GO:0009521 ... D0VWR1 19433803
    1152 3a0b:B (3.7) BS13 CLA ? GO:0009521 ... D0VWR1 19433803
    1153 3a0b:B (3.7) BS14 CLA ? GO:0009521 ... D0VWR1 19433803
    1154 3a0b:B (3.7) BS15 CLA ? GO:0009521 ... D0VWR1 19433803
    1155 3a0b:B (3.7) BS16 CLA ? GO:0009521 ... D0VWR1 19433803
    1156 3a0b:C (3.7) BS02 CLA ? GO:0005737 ... D0VWR7 19433803
    1157 3a0b:C (3.7) BS03 CLA ? GO:0005737 ... D0VWR7 19433803
    1158 3a0b:C (3.7) BS04 CLA ? GO:0005737 ... D0VWR7 19433803
    1159 3a0b:C (3.7) BS05 CLA ? GO:0005737 ... D0VWR7 19433803
    1160 3a0b:C (3.7) BS06 CLA ? GO:0005737 ... D0VWR7 19433803
    1161 3a0b:C (3.7) BS07 CLA ? GO:0005737 ... D0VWR7 19433803
    1162 3a0b:C (3.7) BS08 CLA ? GO:0005737 ... D0VWR7 19433803
    1163 3a0b:C (3.7) BS09 CLA ? GO:0005737 ... D0VWR7 19433803
    1164 3a0b:C (3.7) BS10 CLA ? GO:0005737 ... D0VWR7 19433803
    1165 3a0b:C (3.7) BS11 CLA ? GO:0005737 ... D0VWR7 19433803
    1166 3a0b:C (3.7) BS12 CLA ? GO:0005737 ... D0VWR7 19433803
    1167 3a0b:C (3.7) BS13 CLA ? GO:0005737 ... D0VWR7 19433803
    1168 3a0b:C (3.7) BS14 CLA ? GO:0005737 ... D0VWR7 19433803
    1169 3a0b:D (3.7) BS02 CLA 1.10.3.9 GO:0009523 ... D0VWR8 19433803
    1170 3a0b:D (3.7) BS05 CLA 1.10.3.9 GO:0009523 ... D0VWR8 19433803
    1171 3a0b:D (3.7) BS06 CLA 1.10.3.9 GO:0009523 ... D0VWR8 19433803
    1172 3a0b:D (3.7) BS07 CLA 1.10.3.9 GO:0009523 ... D0VWR8 19433803
    1173 3a0b:D (3.7) BS08 CLA 1.10.3.9 GO:0009523 ... D0VWR8 19433803
    1174 3a0b:H (3.7) BS01 CLA ? GO:0009523 ... P19052 19433803
    1175 3a0b:H (3.7) BS02 CLA ? GO:0009523 ... P19052 19433803
    1176 3a0b:H (3.7) BS03 CLA ? GO:0009523 ... P19052 19433803
    1177 3a0b:I (3.7) BS01 CLA ? GO:0005737 ... P12240 19433803
    1178 3a0b:I (3.7) BS02 CLA ? GO:0005737 ... P12240 19433803
    1179 3a0b:K (3.7) BS02 CLA ? GO:0005737 ... P19054 19433803
    1180 3a0b:K (3.7) BS03 CLA ? GO:0005737 ... P19054 19433803
    1181 3a0b:K (3.7) BS04 CLA ? GO:0005737 ... P19054 19433803
    1182 3a0b:L (3.7) BS01 CLA ? GO:0005737 ... P12241 19433803
    1183 3a0b:M (3.7) BS01 CLA ? GO:0005737 ... P12312 19433803
    1184 3a0b:X (3.7) BS01 CLA ? GO:0009523 ... D0VWR4 19433803
    1185 3a0b:Z (3.7) BS02 CLA ? GO:0009523 ... D0VWR5 19433803
    1186 3a0b:a (3.7) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    1187 3a0b:a (3.7) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    1188 3a0b:a (3.7) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    1189 3a0b:a (3.7) BS08 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    1190 3a0b:a (3.7) BS09 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    1191 3a0b:a (3.7) BS10 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    1192 3a0b:b (3.7) BS01 CLA ? GO:0009521 ... D0VWR1 19433803
    1193 3a0b:b (3.7) BS02 CLA ? GO:0009521 ... D0VWR1 19433803
    1194 3a0b:b (3.7) BS03 CLA ? GO:0009521 ... D0VWR1 19433803
    1195 3a0b:b (3.7) BS04 CLA ? GO:0009521 ... D0VWR1 19433803
    1196 3a0b:b (3.7) BS05 CLA ? GO:0009521 ... D0VWR1 19433803
    1197 3a0b:b (3.7) BS06 CLA ? GO:0009521 ... D0VWR1 19433803
    1198 3a0b:b (3.7) BS07 CLA ? GO:0009521 ... D0VWR1 19433803
    1199 3a0b:b (3.7) BS08 CLA ? GO:0009521 ... D0VWR1 19433803
    1200 3a0b:b (3.7) BS09 CLA ? GO:0009521 ... D0VWR1 19433803

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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