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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    11001 6j40:C (3.8) BS07 CLA N/A GO:0009521 ... N/A 31358960
    11002 6j40:C (3.8) BS08 CLA N/A GO:0009521 ... N/A 31358960
    11003 6j40:C (3.8) BS09 CLA N/A GO:0009521 ... N/A 31358960
    11004 6j40:C (3.8) BS10 CLA N/A GO:0009521 ... N/A 31358960
    11005 6j40:C (3.8) BS11 CLA N/A GO:0009521 ... N/A 31358960
    11006 6j40:C (3.8) BS12 CLA N/A GO:0009521 ... N/A 31358960
    11007 6j40:C (3.8) BS13 CLA N/A GO:0009521 ... N/A 31358960
    11008 6j40:C (3.8) BS14 CLA N/A GO:0009521 ... N/A 31358960
    11009 6j40:C (3.8) BS15 CLA N/A GO:0009521 ... N/A 31358960
    11010 6j40:C (3.8) BS16 CLA N/A GO:0009521 ... N/A 31358960
    11011 6j40:D (3.8) BS05 CLA N/A GO:0009523 ... N/A 31358960
    11012 6j40:D (3.8) BS06 CLA N/A GO:0009523 ... N/A 31358960
    11013 6j40:D (3.8) BS07 CLA N/A GO:0009523 ... N/A 31358960
    11014 6j40:D (3.8) BS09 CLA N/A GO:0009523 ... N/A 31358960
    11015 6j40:D (3.8) BS10 CLA N/A GO:0009523 ... N/A 31358960
    11016 6j40:H (3.8) BS01 CLA ? GO:0009507 ... B7XBY7 31358960
    11017 6j40:H (3.8) BS02 CLA ? GO:0009507 ... B7XBY7 31358960
    11018 6j40:I (3.8) BS01 CLA N/A GO:0009523 ... N/A 31358960
    11019 6j40:I (3.8) BS02 CLA N/A GO:0009523 ... N/A 31358960
    11020 6j40:K (3.8) BS01 CLA N/A GO:0009523 ... N/A 31358960
    11021 6j40:K (3.8) BS02 CLA N/A GO:0009523 ... N/A 31358960
    11022 6j40:W (3.8) BS01 CLA N/A N/A N/A 31358960
    11023 6j40:W (3.8) BS02 CLA N/A N/A N/A 31358960
    11024 6j40:Y (3.8) BS01 CLA N/A GO:0009523 ... N/A 31358960
    11025 6j40:Z (3.8) BS01 CLA N/A GO:0009523 ... N/A 31358960
    11026 6j40:Z (3.8) BS02 CLA N/A GO:0009523 ... N/A 31358960
    11027 6j40:a (3.8) BS03 CLA N/A GO:0009055 ... N/A 31358960
    11028 6j40:a (3.8) BS04 CLA N/A GO:0009055 ... N/A 31358960
    11029 6j40:a (3.8) BS07 CLA N/A GO:0009055 ... N/A 31358960
    11030 6j40:a (3.8) BS08 CLA N/A GO:0009055 ... N/A 31358960
    11031 6j40:b (3.8) BS01 CLA N/A GO:0009521 ... N/A 31358960
    11032 6j40:b (3.8) BS02 CLA N/A GO:0009521 ... N/A 31358960
    11033 6j40:b (3.8) BS03 CLA N/A GO:0009521 ... N/A 31358960
    11034 6j40:b (3.8) BS04 CLA N/A GO:0009521 ... N/A 31358960
    11035 6j40:b (3.8) BS05 CLA N/A GO:0009521 ... N/A 31358960
    11036 6j40:b (3.8) BS06 CLA N/A GO:0009521 ... N/A 31358960
    11037 6j40:b (3.8) BS07 CLA N/A GO:0009521 ... N/A 31358960
    11038 6j40:b (3.8) BS08 CLA N/A GO:0009521 ... N/A 31358960
    11039 6j40:b (3.8) BS09 CLA N/A GO:0009521 ... N/A 31358960
    11040 6j40:b (3.8) BS10 CLA N/A GO:0009521 ... N/A 31358960
    11041 6j40:b (3.8) BS11 CLA N/A GO:0009521 ... N/A 31358960
    11042 6j40:b (3.8) BS12 CLA N/A GO:0009521 ... N/A 31358960
    11043 6j40:b (3.8) BS13 CLA N/A GO:0009521 ... N/A 31358960
    11044 6j40:b (3.8) BS14 CLA N/A GO:0009521 ... N/A 31358960
    11045 6j40:b (3.8) BS15 CLA N/A GO:0009521 ... N/A 31358960
    11046 6j40:b (3.8) BS16 CLA N/A GO:0009521 ... N/A 31358960
    11047 6j40:c (3.8) BS02 CLA N/A GO:0009521 ... N/A 31358960
    11048 6j40:c (3.8) BS03 CLA N/A GO:0009521 ... N/A 31358960
    11049 6j40:c (3.8) BS04 CLA N/A GO:0009521 ... N/A 31358960
    11050 6j40:c (3.8) BS05 CLA N/A GO:0009521 ... N/A 31358960
    11051 6j40:c (3.8) BS06 CLA N/A GO:0009521 ... N/A 31358960
    11052 6j40:c (3.8) BS07 CLA N/A GO:0009521 ... N/A 31358960
    11053 6j40:c (3.8) BS08 CLA N/A GO:0009521 ... N/A 31358960
    11054 6j40:c (3.8) BS09 CLA N/A GO:0009521 ... N/A 31358960
    11055 6j40:c (3.8) BS10 CLA N/A GO:0009521 ... N/A 31358960
    11056 6j40:c (3.8) BS11 CLA N/A GO:0009521 ... N/A 31358960
    11057 6j40:c (3.8) BS12 CLA N/A GO:0009521 ... N/A 31358960
    11058 6j40:c (3.8) BS13 CLA N/A GO:0009521 ... N/A 31358960
    11059 6j40:c (3.8) BS14 CLA N/A GO:0009521 ... N/A 31358960
    11060 6j40:c (3.8) BS15 CLA N/A GO:0009521 ... N/A 31358960
    11061 6j40:c (3.8) BS16 CLA N/A GO:0009521 ... N/A 31358960
    11062 6j40:d (3.8) BS04 CLA N/A GO:0009523 ... N/A 31358960
    11063 6j40:d (3.8) BS05 CLA N/A GO:0009523 ... N/A 31358960
    11064 6j40:d (3.8) BS06 CLA N/A GO:0009523 ... N/A 31358960
    11065 6j40:d (3.8) BS09 CLA N/A GO:0009523 ... N/A 31358960
    11066 6j40:d (3.8) BS10 CLA N/A GO:0009523 ... N/A 31358960
    11067 6j40:h (3.8) BS01 CLA ? GO:0009507 ... B7XBY7 31358960
    11068 6j40:h (3.8) BS02 CLA ? GO:0009507 ... B7XBY7 31358960
    11069 6j40:i (3.8) BS01 CLA N/A GO:0009523 ... N/A 31358960
    11070 6j40:i (3.8) BS02 CLA N/A GO:0009523 ... N/A 31358960
    11071 6j40:k (3.8) BS01 CLA N/A GO:0009523 ... N/A 31358960
    11072 6j40:k (3.8) BS02 CLA N/A GO:0009523 ... N/A 31358960
    11073 6j40:w (3.8) BS01 CLA N/A N/A N/A 31358960
    11074 6j40:w (3.8) BS02 CLA N/A N/A N/A 31358960
    11075 6j40:z (3.8) BS01 CLA N/A GO:0009523 ... N/A 31358960
    11076 6j40:z (3.8) BS02 CLA N/A GO:0009523 ... N/A 31358960
    11077 6j40:z (3.8) BS03 CLA N/A GO:0009523 ... N/A 31358960
    11078 6jeo:aA (3.3) BS02 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11079 6jeo:aA (3.3) BS03 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11080 6jeo:aA (3.3) BS04 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11081 6jeo:aA (3.3) BS05 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11082 6jeo:aA (3.3) BS06 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11083 6jeo:aA (3.3) BS07 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11084 6jeo:aA (3.3) BS08 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11085 6jeo:aA (3.3) BS09 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11086 6jeo:aA (3.3) BS10 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11087 6jeo:aA (3.3) BS11 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11088 6jeo:aA (3.3) BS12 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11089 6jeo:aA (3.3) BS13 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11090 6jeo:aA (3.3) BS14 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11091 6jeo:aA (3.3) BS15 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11092 6jeo:aA (3.3) BS16 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11093 6jeo:aA (3.3) BS17 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11094 6jeo:aA (3.3) BS18 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11095 6jeo:aA (3.3) BS19 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11096 6jeo:aA (3.3) BS20 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11097 6jeo:aA (3.3) BS21 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11098 6jeo:aA (3.3) BS22 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11099 6jeo:aA (3.3) BS23 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11100 6jeo:aA (3.3) BS24 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11101 6jeo:aA (3.3) BS25 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11102 6jeo:aA (3.3) BS26 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11103 6jeo:aA (3.3) BS27 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11104 6jeo:aA (3.3) BS28 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11105 6jeo:aA (3.3) BS29 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11106 6jeo:aA (3.3) BS30 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11107 6jeo:aA (3.3) BS31 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11108 6jeo:aA (3.3) BS32 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11109 6jeo:aA (3.3) BS33 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11110 6jeo:aA (3.3) BS34 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11111 6jeo:aA (3.3) BS35 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11112 6jeo:aA (3.3) BS36 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11113 6jeo:aA (3.3) BS37 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11114 6jeo:aA (3.3) BS38 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11115 6jeo:aA (3.3) BS39 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11116 6jeo:aA (3.3) BS40 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11117 6jeo:aA (3.3) BS41 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11118 6jeo:aA (3.3) BS42 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11119 6jeo:aA (3.3) BS45 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11120 6jeo:aA (3.3) BS46 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11121 6jeo:aA (3.3) BS47 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11122 6jeo:aA (3.3) BS48 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11123 6jeo:aA (3.3) BS49 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11124 6jeo:aA (3.3) BS50 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11125 6jeo:aB (3.3) BS03 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11126 6jeo:aB (3.3) BS04 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11127 6jeo:aB (3.3) BS05 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11128 6jeo:aB (3.3) BS06 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11129 6jeo:aB (3.3) BS08 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11130 6jeo:aB (3.3) BS09 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11131 6jeo:aB (3.3) BS10 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11132 6jeo:aB (3.3) BS11 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11133 6jeo:aB (3.3) BS12 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11134 6jeo:aB (3.3) BS13 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11135 6jeo:aB (3.3) BS14 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11136 6jeo:aB (3.3) BS15 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11137 6jeo:aB (3.3) BS16 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11138 6jeo:aB (3.3) BS17 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11139 6jeo:aB (3.3) BS18 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11140 6jeo:aB (3.3) BS19 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11141 6jeo:aB (3.3) BS20 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11142 6jeo:aB (3.3) BS21 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11143 6jeo:aB (3.3) BS22 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11144 6jeo:aB (3.3) BS23 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11145 6jeo:aB (3.3) BS24 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11146 6jeo:aB (3.3) BS25 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11147 6jeo:aB (3.3) BS26 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11148 6jeo:aB (3.3) BS27 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11149 6jeo:aB (3.3) BS28 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11150 6jeo:aB (3.3) BS29 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11151 6jeo:aB (3.3) BS30 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11152 6jeo:aB (3.3) BS31 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11153 6jeo:aB (3.3) BS32 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11154 6jeo:aB (3.3) BS33 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11155 6jeo:aB (3.3) BS34 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11156 6jeo:aB (3.3) BS35 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11157 6jeo:aB (3.3) BS36 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11158 6jeo:aB (3.3) BS37 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11159 6jeo:aB (3.3) BS38 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11160 6jeo:aB (3.3) BS39 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11161 6jeo:aB (3.3) BS40 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11162 6jeo:aB (3.3) BS41 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11163 6jeo:aB (3.3) BS42 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11164 6jeo:aB (3.3) BS43 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11165 6jeo:aB (3.3) BS44 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11166 6jeo:aB (3.3) BS45 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11167 6jeo:aB (3.3) BS46 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11168 6jeo:aB (3.3) BS47 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11169 6jeo:aB (3.3) BS49 CLA 1.97.1.12 GO:0000287 ... P58565 31666526
    11170 6jeo:aF (3.3) BS01 CLA ? GO:0009522 ... P58564 31666526
    11171 6jeo:aF (3.3) BS02 CLA ? GO:0009522 ... P58564 31666526
    11172 6jeo:aF (3.3) BS03 CLA ? GO:0009522 ... P58564 31666526
    11173 6jeo:aF (3.3) BS04 CLA ? GO:0009522 ... P58564 31666526
    11174 6jeo:aF (3.3) BS05 CLA ? GO:0009522 ... P58564 31666526
    11175 6jeo:aI (3.3) BS01 CLA ? GO:0009522 ... P58560 31666526
    11176 6jeo:aI (3.3) BS02 CLA ? GO:0009522 ... P58560 31666526
    11177 6jeo:aJ (3.3) BS01 CLA ? GO:0009522 ... P58568 31666526
    11178 6jeo:aJ (3.3) BS02 CLA ? GO:0009522 ... P58568 31666526
    11179 6jeo:aJ (3.3) BS03 CLA ? GO:0009522 ... P58568 31666526
    11180 6jeo:aJ (3.3) BS04 CLA ? GO:0009522 ... P58568 31666526
    11181 6jeo:aK (3.3) BS01 CLA ? GO:0009522 ... P58583 31666526
    11182 6jeo:aK (3.3) BS02 CLA ? GO:0009522 ... P58583 31666526
    11183 6jeo:aL (3.3) BS01 CLA ? GO:0009522 ... P58577 31666526
    11184 6jeo:aL (3.3) BS02 CLA ? GO:0009522 ... P58577 31666526
    11185 6jeo:aL (3.3) BS03 CLA ? GO:0009522 ... P58577 31666526
    11186 6jeo:aL (3.3) BS04 CLA ? GO:0009522 ... P58577 31666526
    11187 6jeo:aL (3.3) BS05 CLA ? GO:0009522 ... P58577 31666526
    11188 6jeo:aL (3.3) BS06 CLA ? GO:0009522 ... P58577 31666526
    11189 6jeo:aL (3.3) BS07 CLA ? GO:0009522 ... P58577 31666526
    11190 6jeo:aM (3.3) BS01 CLA ? GO:0009522 ... Q8YNB0 31666526
    11191 6jeo:bA (3.3) BS02 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11192 6jeo:bA (3.3) BS03 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11193 6jeo:bA (3.3) BS04 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11194 6jeo:bA (3.3) BS05 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11195 6jeo:bA (3.3) BS06 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11196 6jeo:bA (3.3) BS07 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11197 6jeo:bA (3.3) BS08 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11198 6jeo:bA (3.3) BS09 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11199 6jeo:bA (3.3) BS10 CLA 1.97.1.12 GO:0000287 ... P58576 31666526
    11200 6jeo:bA (3.3) BS11 CLA 1.97.1.12 GO:0000287 ... P58576 31666526

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218