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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    10801 6j40:14 (3.8) BS01 CLA N/A GO:0009765 ... N/A 31358960
    10802 6j40:14 (3.8) BS03 CLA N/A GO:0009765 ... N/A 31358960
    10803 6j40:14 (3.8) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10804 6j40:14 (3.8) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10805 6j40:14 (3.8) BS09 CLA N/A GO:0009765 ... N/A 31358960
    10806 6j40:14 (3.8) BS10 CLA N/A GO:0009765 ... N/A 31358960
    10807 6j40:14 (3.8) BS11 CLA N/A GO:0009765 ... N/A 31358960
    10808 6j40:14 (3.8) BS12 CLA N/A GO:0009765 ... N/A 31358960
    10809 6j40:14 (3.8) BS13 CLA N/A GO:0009765 ... N/A 31358960
    10810 6j40:14 (3.8) BS14 CLA N/A GO:0009765 ... N/A 31358960
    10811 6j40:14 (3.8) BS15 CLA N/A GO:0009765 ... N/A 31358960
    10812 6j40:14 (3.8) BS16 CLA N/A GO:0009765 ... N/A 31358960
    10813 6j40:15 (3.8) BS01 CLA N/A GO:0009765 ... N/A 31358960
    10814 6j40:15 (3.8) BS02 CLA N/A GO:0009765 ... N/A 31358960
    10815 6j40:15 (3.8) BS03 CLA N/A GO:0009765 ... N/A 31358960
    10816 6j40:15 (3.8) BS04 CLA N/A GO:0009765 ... N/A 31358960
    10817 6j40:15 (3.8) BS05 CLA N/A GO:0009765 ... N/A 31358960
    10818 6j40:15 (3.8) BS06 CLA N/A GO:0009765 ... N/A 31358960
    10819 6j40:15 (3.8) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10820 6j40:15 (3.8) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10821 6j40:15 (3.8) BS14 CLA N/A GO:0009765 ... N/A 31358960
    10822 6j40:15 (3.8) BS16 CLA N/A GO:0009765 ... N/A 31358960
    10823 6j40:16 (3.8) BS01 CLA N/A GO:0009765 ... N/A 31358960
    10824 6j40:16 (3.8) BS02 CLA N/A GO:0009765 ... N/A 31358960
    10825 6j40:16 (3.8) BS03 CLA N/A GO:0009765 ... N/A 31358960
    10826 6j40:16 (3.8) BS04 CLA N/A GO:0009765 ... N/A 31358960
    10827 6j40:16 (3.8) BS05 CLA N/A GO:0009765 ... N/A 31358960
    10828 6j40:16 (3.8) BS06 CLA N/A GO:0009765 ... N/A 31358960
    10829 6j40:16 (3.8) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10830 6j40:16 (3.8) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10831 6j40:16 (3.8) BS09 CLA N/A GO:0009765 ... N/A 31358960
    10832 6j40:16 (3.8) BS14 CLA N/A GO:0009765 ... N/A 31358960
    10833 6j40:17 (3.8) BS01 CLA N/A GO:0009765 ... N/A 31358960
    10834 6j40:17 (3.8) BS03 CLA N/A GO:0009765 ... N/A 31358960
    10835 6j40:17 (3.8) BS04 CLA N/A GO:0009765 ... N/A 31358960
    10836 6j40:17 (3.8) BS05 CLA N/A GO:0009765 ... N/A 31358960
    10837 6j40:17 (3.8) BS06 CLA N/A GO:0009765 ... N/A 31358960
    10838 6j40:17 (3.8) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10839 6j40:17 (3.8) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10840 6j40:17 (3.8) BS09 CLA N/A GO:0009765 ... N/A 31358960
    10841 6j40:17 (3.8) BS10 CLA N/A GO:0009765 ... N/A 31358960
    10842 6j40:17 (3.8) BS17 CLA N/A GO:0009765 ... N/A 31358960
    10843 6j40:17 (3.8) BS19 CLA N/A GO:0009765 ... N/A 31358960
    10844 6j40:18 (3.8) BS01 CLA N/A GO:0009765 ... N/A 31358960
    10845 6j40:18 (3.8) BS05 CLA N/A GO:0009765 ... N/A 31358960
    10846 6j40:18 (3.8) BS06 CLA N/A GO:0009765 ... N/A 31358960
    10847 6j40:18 (3.8) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10848 6j40:18 (3.8) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10849 6j40:18 (3.8) BS09 CLA N/A GO:0009765 ... N/A 31358960
    10850 6j40:18 (3.8) BS10 CLA N/A GO:0009765 ... N/A 31358960
    10851 6j40:18 (3.8) BS11 CLA N/A GO:0009765 ... N/A 31358960
    10852 6j40:18 (3.8) BS12 CLA N/A GO:0009765 ... N/A 31358960
    10853 6j40:18 (3.8) BS13 CLA N/A GO:0009765 ... N/A 31358960
    10854 6j40:18 (3.8) BS14 CLA N/A GO:0009765 ... N/A 31358960
    10855 6j40:19 (3.8) BS01 CLA N/A N/A N/A 31358960
    10856 6j40:19 (3.8) BS02 CLA N/A N/A N/A 31358960
    10857 6j40:19 (3.8) BS03 CLA N/A N/A N/A 31358960
    10858 6j40:19 (3.8) BS04 CLA N/A N/A N/A 31358960
    10859 6j40:19 (3.8) BS05 CLA N/A N/A N/A 31358960
    10860 6j40:20 (3.8) BS01 CLA N/A N/A N/A 31358960
    10861 6j40:20 (3.8) BS03 CLA N/A N/A N/A 31358960
    10862 6j40:20 (3.8) BS04 CLA N/A N/A N/A 31358960
    10863 6j40:20 (3.8) BS05 CLA N/A N/A N/A 31358960
    10864 6j40:20 (3.8) BS06 CLA N/A N/A N/A 31358960
    10865 6j40:20 (3.8) BS07 CLA N/A N/A N/A 31358960
    10866 6j40:20 (3.8) BS08 CLA N/A N/A N/A 31358960
    10867 6j40:21 (3.8) BS01 CLA N/A N/A N/A 31358960
    10868 6j40:21 (3.8) BS02 CLA N/A N/A N/A 31358960
    10869 6j40:21 (3.8) BS03 CLA N/A N/A N/A 31358960
    10870 6j40:21 (3.8) BS04 CLA N/A N/A N/A 31358960
    10871 6j40:21 (3.8) BS05 CLA N/A N/A N/A 31358960
    10872 6j40:21 (3.8) BS06 CLA N/A N/A N/A 31358960
    10873 6j40:31 (3.8) BS01 CLA N/A GO:0009765 ... N/A 31358960
    10874 6j40:31 (3.8) BS02 CLA N/A GO:0009765 ... N/A 31358960
    10875 6j40:31 (3.8) BS03 CLA N/A GO:0009765 ... N/A 31358960
    10876 6j40:31 (3.8) BS04 CLA N/A GO:0009765 ... N/A 31358960
    10877 6j40:31 (3.8) BS05 CLA N/A GO:0009765 ... N/A 31358960
    10878 6j40:31 (3.8) BS06 CLA N/A GO:0009765 ... N/A 31358960
    10879 6j40:31 (3.8) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10880 6j40:31 (3.8) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10881 6j40:31 (3.8) BS09 CLA N/A GO:0009765 ... N/A 31358960
    10882 6j40:31 (3.8) BS15 CLA N/A GO:0009765 ... N/A 31358960
    10883 6j40:31 (3.8) BS17 CLA N/A GO:0009765 ... N/A 31358960
    10884 6j40:31 (3.8) BS19 CLA N/A GO:0009765 ... N/A 31358960
    10885 6j40:32 (3.8) BS01 CLA N/A GO:0009765 ... N/A 31358960
    10886 6j40:32 (3.8) BS02 CLA N/A GO:0009765 ... N/A 31358960
    10887 6j40:32 (3.8) BS03 CLA N/A GO:0009765 ... N/A 31358960
    10888 6j40:32 (3.8) BS04 CLA N/A GO:0009765 ... N/A 31358960
    10889 6j40:32 (3.8) BS05 CLA N/A GO:0009765 ... N/A 31358960
    10890 6j40:32 (3.8) BS06 CLA N/A GO:0009765 ... N/A 31358960
    10891 6j40:32 (3.8) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10892 6j40:32 (3.8) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10893 6j40:32 (3.8) BS09 CLA N/A GO:0009765 ... N/A 31358960
    10894 6j40:32 (3.8) BS15 CLA N/A GO:0009765 ... N/A 31358960
    10895 6j40:32 (3.8) BS17 CLA N/A GO:0009765 ... N/A 31358960
    10896 6j40:33 (3.8) BS02 CLA N/A GO:0009765 ... N/A 31358960
    10897 6j40:33 (3.8) BS04 CLA N/A GO:0009765 ... N/A 31358960
    10898 6j40:33 (3.8) BS05 CLA N/A GO:0009765 ... N/A 31358960
    10899 6j40:33 (3.8) BS06 CLA N/A GO:0009765 ... N/A 31358960
    10900 6j40:33 (3.8) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10901 6j40:33 (3.8) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10902 6j40:33 (3.8) BS09 CLA N/A GO:0009765 ... N/A 31358960
    10903 6j40:33 (3.8) BS10 CLA N/A GO:0009765 ... N/A 31358960
    10904 6j40:33 (3.8) BS11 CLA N/A GO:0009765 ... N/A 31358960
    10905 6j40:33 (3.8) BS18 CLA N/A GO:0009765 ... N/A 31358960
    10906 6j40:34 (3.8) BS01 CLA N/A GO:0009765 ... N/A 31358960
    10907 6j40:34 (3.8) BS03 CLA N/A GO:0009765 ... N/A 31358960
    10908 6j40:34 (3.8) BS06 CLA N/A GO:0009765 ... N/A 31358960
    10909 6j40:34 (3.8) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10910 6j40:34 (3.8) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10911 6j40:34 (3.8) BS09 CLA N/A GO:0009765 ... N/A 31358960
    10912 6j40:34 (3.8) BS10 CLA N/A GO:0009765 ... N/A 31358960
    10913 6j40:34 (3.8) BS11 CLA N/A GO:0009765 ... N/A 31358960
    10914 6j40:34 (3.8) BS12 CLA N/A GO:0009765 ... N/A 31358960
    10915 6j40:34 (3.8) BS13 CLA N/A GO:0009765 ... N/A 31358960
    10916 6j40:35 (3.8) BS01 CLA N/A GO:0009765 ... N/A 31358960
    10917 6j40:35 (3.8) BS02 CLA N/A GO:0009765 ... N/A 31358960
    10918 6j40:35 (3.8) BS03 CLA N/A GO:0009765 ... N/A 31358960
    10919 6j40:35 (3.8) BS04 CLA N/A GO:0009765 ... N/A 31358960
    10920 6j40:35 (3.8) BS05 CLA N/A GO:0009765 ... N/A 31358960
    10921 6j40:35 (3.8) BS06 CLA N/A GO:0009765 ... N/A 31358960
    10922 6j40:35 (3.8) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10923 6j40:35 (3.8) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10924 6j40:35 (3.8) BS14 CLA N/A GO:0009765 ... N/A 31358960
    10925 6j40:35 (3.8) BS16 CLA N/A GO:0009765 ... N/A 31358960
    10926 6j40:36 (3.8) BS01 CLA N/A GO:0009765 ... N/A 31358960
    10927 6j40:36 (3.8) BS02 CLA N/A GO:0009765 ... N/A 31358960
    10928 6j40:36 (3.8) BS03 CLA N/A GO:0009765 ... N/A 31358960
    10929 6j40:36 (3.8) BS04 CLA N/A GO:0009765 ... N/A 31358960
    10930 6j40:36 (3.8) BS05 CLA N/A GO:0009765 ... N/A 31358960
    10931 6j40:36 (3.8) BS06 CLA N/A GO:0009765 ... N/A 31358960
    10932 6j40:36 (3.8) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10933 6j40:36 (3.8) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10934 6j40:36 (3.8) BS09 CLA N/A GO:0009765 ... N/A 31358960
    10935 6j40:36 (3.8) BS14 CLA N/A GO:0009765 ... N/A 31358960
    10936 6j40:37 (3.8) BS01 CLA N/A GO:0009765 ... N/A 31358960
    10937 6j40:37 (3.8) BS03 CLA N/A GO:0009765 ... N/A 31358960
    10938 6j40:37 (3.8) BS04 CLA N/A GO:0009765 ... N/A 31358960
    10939 6j40:37 (3.8) BS05 CLA N/A GO:0009765 ... N/A 31358960
    10940 6j40:37 (3.8) BS06 CLA N/A GO:0009765 ... N/A 31358960
    10941 6j40:37 (3.8) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10942 6j40:37 (3.8) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10943 6j40:37 (3.8) BS09 CLA N/A GO:0009765 ... N/A 31358960
    10944 6j40:37 (3.8) BS10 CLA N/A GO:0009765 ... N/A 31358960
    10945 6j40:37 (3.8) BS17 CLA N/A GO:0009765 ... N/A 31358960
    10946 6j40:37 (3.8) BS18 CLA N/A GO:0009765 ... N/A 31358960
    10947 6j40:38 (3.8) BS01 CLA N/A GO:0009765 ... N/A 31358960
    10948 6j40:38 (3.8) BS05 CLA N/A GO:0009765 ... N/A 31358960
    10949 6j40:38 (3.8) BS06 CLA N/A GO:0009765 ... N/A 31358960
    10950 6j40:38 (3.8) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10951 6j40:38 (3.8) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10952 6j40:38 (3.8) BS09 CLA N/A GO:0009765 ... N/A 31358960
    10953 6j40:38 (3.8) BS10 CLA N/A GO:0009765 ... N/A 31358960
    10954 6j40:38 (3.8) BS11 CLA N/A GO:0009765 ... N/A 31358960
    10955 6j40:38 (3.8) BS12 CLA N/A GO:0009765 ... N/A 31358960
    10956 6j40:38 (3.8) BS13 CLA N/A GO:0009765 ... N/A 31358960
    10957 6j40:38 (3.8) BS14 CLA N/A GO:0009765 ... N/A 31358960
    10958 6j40:39 (3.8) BS01 CLA N/A N/A N/A 31358960
    10959 6j40:39 (3.8) BS02 CLA N/A N/A N/A 31358960
    10960 6j40:39 (3.8) BS03 CLA N/A N/A N/A 31358960
    10961 6j40:39 (3.8) BS04 CLA N/A N/A N/A 31358960
    10962 6j40:39 (3.8) BS05 CLA N/A N/A N/A 31358960
    10963 6j40:40 (3.8) BS01 CLA N/A N/A N/A 31358960
    10964 6j40:40 (3.8) BS03 CLA N/A N/A N/A 31358960
    10965 6j40:40 (3.8) BS04 CLA N/A N/A N/A 31358960
    10966 6j40:40 (3.8) BS05 CLA N/A N/A N/A 31358960
    10967 6j40:40 (3.8) BS06 CLA N/A N/A N/A 31358960
    10968 6j40:40 (3.8) BS07 CLA N/A N/A N/A 31358960
    10969 6j40:40 (3.8) BS08 CLA N/A N/A N/A 31358960
    10970 6j40:41 (3.8) BS01 CLA N/A N/A N/A 31358960
    10971 6j40:41 (3.8) BS02 CLA N/A N/A N/A 31358960
    10972 6j40:41 (3.8) BS03 CLA N/A N/A N/A 31358960
    10973 6j40:41 (3.8) BS04 CLA N/A N/A N/A 31358960
    10974 6j40:41 (3.8) BS05 CLA N/A N/A N/A 31358960
    10975 6j40:41 (3.8) BS06 CLA N/A N/A N/A 31358960
    10976 6j40:A (3.8) BS03 CLA N/A GO:0009055 ... N/A 31358960
    10977 6j40:A (3.8) BS05 CLA N/A GO:0009055 ... N/A 31358960
    10978 6j40:A (3.8) BS08 CLA N/A GO:0009055 ... N/A 31358960
    10979 6j40:A (3.8) BS09 CLA N/A GO:0009055 ... N/A 31358960
    10980 6j40:B (3.8) BS01 CLA N/A GO:0009521 ... N/A 31358960
    10981 6j40:B (3.8) BS02 CLA N/A GO:0009521 ... N/A 31358960
    10982 6j40:B (3.8) BS03 CLA N/A GO:0009521 ... N/A 31358960
    10983 6j40:B (3.8) BS04 CLA N/A GO:0009521 ... N/A 31358960
    10984 6j40:B (3.8) BS05 CLA N/A GO:0009521 ... N/A 31358960
    10985 6j40:B (3.8) BS06 CLA N/A GO:0009521 ... N/A 31358960
    10986 6j40:B (3.8) BS07 CLA N/A GO:0009521 ... N/A 31358960
    10987 6j40:B (3.8) BS08 CLA N/A GO:0009521 ... N/A 31358960
    10988 6j40:B (3.8) BS09 CLA N/A GO:0009521 ... N/A 31358960
    10989 6j40:B (3.8) BS10 CLA N/A GO:0009521 ... N/A 31358960
    10990 6j40:B (3.8) BS11 CLA N/A GO:0009521 ... N/A 31358960
    10991 6j40:B (3.8) BS12 CLA N/A GO:0009521 ... N/A 31358960
    10992 6j40:B (3.8) BS13 CLA N/A GO:0009521 ... N/A 31358960
    10993 6j40:B (3.8) BS14 CLA N/A GO:0009521 ... N/A 31358960
    10994 6j40:B (3.8) BS15 CLA N/A GO:0009521 ... N/A 31358960
    10995 6j40:B (3.8) BS16 CLA N/A GO:0009521 ... N/A 31358960
    10996 6j40:C (3.8) BS02 CLA N/A GO:0009521 ... N/A 31358960
    10997 6j40:C (3.8) BS03 CLA N/A GO:0009521 ... N/A 31358960
    10998 6j40:C (3.8) BS04 CLA N/A GO:0009521 ... N/A 31358960
    10999 6j40:C (3.8) BS05 CLA N/A GO:0009521 ... N/A 31358960
    11000 6j40:C (3.8) BS06 CLA N/A GO:0009521 ... N/A 31358960
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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