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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    10601 6j3z:14 (3.6) BS09 CLA N/A GO:0009765 ... N/A 31358960
    10602 6j3z:14 (3.6) BS10 CLA N/A GO:0009765 ... N/A 31358960
    10603 6j3z:14 (3.6) BS11 CLA N/A GO:0009765 ... N/A 31358960
    10604 6j3z:14 (3.6) BS12 CLA N/A GO:0009765 ... N/A 31358960
    10605 6j3z:14 (3.6) BS13 CLA N/A GO:0009765 ... N/A 31358960
    10606 6j3z:14 (3.6) BS14 CLA N/A GO:0009765 ... N/A 31358960
    10607 6j3z:15 (3.6) BS01 CLA N/A GO:0009765 ... N/A 31358960
    10608 6j3z:15 (3.6) BS02 CLA N/A GO:0009765 ... N/A 31358960
    10609 6j3z:15 (3.6) BS03 CLA N/A GO:0009765 ... N/A 31358960
    10610 6j3z:15 (3.6) BS04 CLA N/A GO:0009765 ... N/A 31358960
    10611 6j3z:15 (3.6) BS05 CLA N/A GO:0009765 ... N/A 31358960
    10612 6j3z:15 (3.6) BS06 CLA N/A GO:0009765 ... N/A 31358960
    10613 6j3z:15 (3.6) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10614 6j3z:15 (3.6) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10615 6j3z:15 (3.6) BS14 CLA N/A GO:0009765 ... N/A 31358960
    10616 6j3z:15 (3.6) BS16 CLA N/A GO:0009765 ... N/A 31358960
    10617 6j3z:16 (3.6) BS01 CLA N/A GO:0009765 ... N/A 31358960
    10618 6j3z:16 (3.6) BS02 CLA N/A GO:0009765 ... N/A 31358960
    10619 6j3z:16 (3.6) BS03 CLA N/A GO:0009765 ... N/A 31358960
    10620 6j3z:16 (3.6) BS04 CLA N/A GO:0009765 ... N/A 31358960
    10621 6j3z:16 (3.6) BS05 CLA N/A GO:0009765 ... N/A 31358960
    10622 6j3z:16 (3.6) BS06 CLA N/A GO:0009765 ... N/A 31358960
    10623 6j3z:16 (3.6) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10624 6j3z:16 (3.6) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10625 6j3z:16 (3.6) BS09 CLA N/A GO:0009765 ... N/A 31358960
    10626 6j3z:16 (3.6) BS14 CLA N/A GO:0009765 ... N/A 31358960
    10627 6j3z:17 (3.6) BS01 CLA N/A GO:0009765 ... N/A 31358960
    10628 6j3z:17 (3.6) BS03 CLA N/A GO:0009765 ... N/A 31358960
    10629 6j3z:17 (3.6) BS04 CLA N/A GO:0009765 ... N/A 31358960
    10630 6j3z:17 (3.6) BS05 CLA N/A GO:0009765 ... N/A 31358960
    10631 6j3z:17 (3.6) BS06 CLA N/A GO:0009765 ... N/A 31358960
    10632 6j3z:17 (3.6) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10633 6j3z:17 (3.6) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10634 6j3z:17 (3.6) BS09 CLA N/A GO:0009765 ... N/A 31358960
    10635 6j3z:17 (3.6) BS10 CLA N/A GO:0009765 ... N/A 31358960
    10636 6j3z:17 (3.6) BS17 CLA N/A GO:0009765 ... N/A 31358960
    10637 6j3z:17 (3.6) BS18 CLA N/A GO:0009765 ... N/A 31358960
    10638 6j3z:18 (3.6) BS01 CLA N/A GO:0009765 ... N/A 31358960
    10639 6j3z:18 (3.6) BS05 CLA N/A GO:0009765 ... N/A 31358960
    10640 6j3z:18 (3.6) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10641 6j3z:18 (3.6) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10642 6j3z:18 (3.6) BS09 CLA N/A GO:0009765 ... N/A 31358960
    10643 6j3z:18 (3.6) BS10 CLA N/A GO:0009765 ... N/A 31358960
    10644 6j3z:18 (3.6) BS11 CLA N/A GO:0009765 ... N/A 31358960
    10645 6j3z:18 (3.6) BS12 CLA N/A GO:0009765 ... N/A 31358960
    10646 6j3z:18 (3.6) BS13 CLA N/A GO:0009765 ... N/A 31358960
    10647 6j3z:18 (3.6) BS14 CLA N/A GO:0009765 ... N/A 31358960
    10648 6j3z:18 (3.6) BS15 CLA N/A GO:0009765 ... N/A 31358960
    10649 6j3z:19 (3.6) BS01 CLA N/A N/A N/A 31358960
    10650 6j3z:19 (3.6) BS02 CLA N/A N/A N/A 31358960
    10651 6j3z:19 (3.6) BS03 CLA N/A N/A N/A 31358960
    10652 6j3z:19 (3.6) BS04 CLA N/A N/A N/A 31358960
    10653 6j3z:19 (3.6) BS05 CLA N/A N/A N/A 31358960
    10654 6j3z:20 (3.6) BS01 CLA N/A N/A N/A 31358960
    10655 6j3z:20 (3.6) BS03 CLA N/A N/A N/A 31358960
    10656 6j3z:20 (3.6) BS04 CLA N/A N/A N/A 31358960
    10657 6j3z:20 (3.6) BS05 CLA N/A N/A N/A 31358960
    10658 6j3z:20 (3.6) BS06 CLA N/A N/A N/A 31358960
    10659 6j3z:20 (3.6) BS07 CLA N/A N/A N/A 31358960
    10660 6j3z:20 (3.6) BS08 CLA N/A N/A N/A 31358960
    10661 6j3z:21 (3.6) BS01 CLA N/A N/A N/A 31358960
    10662 6j3z:21 (3.6) BS02 CLA N/A N/A N/A 31358960
    10663 6j3z:21 (3.6) BS03 CLA N/A N/A N/A 31358960
    10664 6j3z:21 (3.6) BS04 CLA N/A N/A N/A 31358960
    10665 6j3z:21 (3.6) BS05 CLA N/A N/A N/A 31358960
    10666 6j3z:21 (3.6) BS06 CLA N/A N/A N/A 31358960
    10667 6j3z:A (3.6) BS03 CLA N/A GO:0009055 ... N/A 31358960
    10668 6j3z:A (3.6) BS05 CLA N/A GO:0009055 ... N/A 31358960
    10669 6j3z:A (3.6) BS08 CLA N/A GO:0009055 ... N/A 31358960
    10670 6j3z:A (3.6) BS09 CLA N/A GO:0009055 ... N/A 31358960
    10671 6j3z:B (3.6) BS01 CLA N/A GO:0009521 ... N/A 31358960
    10672 6j3z:B (3.6) BS02 CLA N/A GO:0009521 ... N/A 31358960
    10673 6j3z:B (3.6) BS03 CLA N/A GO:0009521 ... N/A 31358960
    10674 6j3z:B (3.6) BS04 CLA N/A GO:0009521 ... N/A 31358960
    10675 6j3z:B (3.6) BS05 CLA N/A GO:0009521 ... N/A 31358960
    10676 6j3z:B (3.6) BS06 CLA N/A GO:0009521 ... N/A 31358960
    10677 6j3z:B (3.6) BS07 CLA N/A GO:0009521 ... N/A 31358960
    10678 6j3z:B (3.6) BS08 CLA N/A GO:0009521 ... N/A 31358960
    10679 6j3z:B (3.6) BS09 CLA N/A GO:0009521 ... N/A 31358960
    10680 6j3z:B (3.6) BS10 CLA N/A GO:0009521 ... N/A 31358960
    10681 6j3z:B (3.6) BS11 CLA N/A GO:0009521 ... N/A 31358960
    10682 6j3z:B (3.6) BS12 CLA N/A GO:0009521 ... N/A 31358960
    10683 6j3z:B (3.6) BS13 CLA N/A GO:0009521 ... N/A 31358960
    10684 6j3z:B (3.6) BS14 CLA N/A GO:0009521 ... N/A 31358960
    10685 6j3z:B (3.6) BS15 CLA N/A GO:0009521 ... N/A 31358960
    10686 6j3z:B (3.6) BS16 CLA N/A GO:0009521 ... N/A 31358960
    10687 6j3z:C (3.6) BS02 CLA N/A GO:0009521 ... N/A 31358960
    10688 6j3z:C (3.6) BS03 CLA N/A GO:0009521 ... N/A 31358960
    10689 6j3z:C (3.6) BS04 CLA N/A GO:0009521 ... N/A 31358960
    10690 6j3z:C (3.6) BS05 CLA N/A GO:0009521 ... N/A 31358960
    10691 6j3z:C (3.6) BS06 CLA N/A GO:0009521 ... N/A 31358960
    10692 6j3z:C (3.6) BS07 CLA N/A GO:0009521 ... N/A 31358960
    10693 6j3z:C (3.6) BS08 CLA N/A GO:0009521 ... N/A 31358960
    10694 6j3z:C (3.6) BS09 CLA N/A GO:0009521 ... N/A 31358960
    10695 6j3z:C (3.6) BS10 CLA N/A GO:0009521 ... N/A 31358960
    10696 6j3z:C (3.6) BS11 CLA N/A GO:0009521 ... N/A 31358960
    10697 6j3z:C (3.6) BS12 CLA N/A GO:0009521 ... N/A 31358960
    10698 6j3z:C (3.6) BS13 CLA N/A GO:0009521 ... N/A 31358960
    10699 6j3z:C (3.6) BS14 CLA N/A GO:0009521 ... N/A 31358960
    10700 6j3z:C (3.6) BS15 CLA N/A GO:0009521 ... N/A 31358960
    10701 6j3z:C (3.6) BS16 CLA N/A GO:0009521 ... N/A 31358960
    10702 6j3z:D (3.6) BS05 CLA N/A GO:0009523 ... N/A 31358960
    10703 6j3z:D (3.6) BS06 CLA N/A GO:0009523 ... N/A 31358960
    10704 6j3z:D (3.6) BS07 CLA N/A GO:0009523 ... N/A 31358960
    10705 6j3z:D (3.6) BS09 CLA N/A GO:0009523 ... N/A 31358960
    10706 6j3z:D (3.6) BS10 CLA N/A GO:0009523 ... N/A 31358960
    10707 6j3z:H (3.6) BS01 CLA ? GO:0009507 ... B7XBY7 31358960
    10708 6j3z:H (3.6) BS02 CLA ? GO:0009507 ... B7XBY7 31358960
    10709 6j3z:I (3.6) BS01 CLA N/A GO:0009523 ... N/A 31358960
    10710 6j3z:I (3.6) BS02 CLA N/A GO:0009523 ... N/A 31358960
    10711 6j3z:I (3.6) BS03 CLA N/A GO:0009523 ... N/A 31358960
    10712 6j3z:K (3.6) BS01 CLA N/A GO:0009523 ... N/A 31358960
    10713 6j3z:K (3.6) BS02 CLA N/A GO:0009523 ... N/A 31358960
    10714 6j3z:W (3.6) BS01 CLA N/A N/A N/A 31358960
    10715 6j3z:W (3.6) BS02 CLA N/A N/A N/A 31358960
    10716 6j3z:Y (3.6) BS01 CLA N/A GO:0009523 ... N/A 31358960
    10717 6j3z:Z (3.6) BS01 CLA N/A GO:0009523 ... N/A 31358960
    10718 6j3z:Z (3.6) BS02 CLA N/A GO:0009523 ... N/A 31358960
    10719 6j3z:a (3.6) BS03 CLA N/A GO:0009055 ... N/A 31358960
    10720 6j3z:a (3.6) BS04 CLA N/A GO:0009055 ... N/A 31358960
    10721 6j3z:a (3.6) BS07 CLA N/A GO:0009055 ... N/A 31358960
    10722 6j3z:a (3.6) BS08 CLA N/A GO:0009055 ... N/A 31358960
    10723 6j3z:b (3.6) BS01 CLA N/A GO:0009521 ... N/A 31358960
    10724 6j3z:b (3.6) BS02 CLA N/A GO:0009521 ... N/A 31358960
    10725 6j3z:b (3.6) BS03 CLA N/A GO:0009521 ... N/A 31358960
    10726 6j3z:b (3.6) BS04 CLA N/A GO:0009521 ... N/A 31358960
    10727 6j3z:b (3.6) BS05 CLA N/A GO:0009521 ... N/A 31358960
    10728 6j3z:b (3.6) BS06 CLA N/A GO:0009521 ... N/A 31358960
    10729 6j3z:b (3.6) BS07 CLA N/A GO:0009521 ... N/A 31358960
    10730 6j3z:b (3.6) BS08 CLA N/A GO:0009521 ... N/A 31358960
    10731 6j3z:b (3.6) BS09 CLA N/A GO:0009521 ... N/A 31358960
    10732 6j3z:b (3.6) BS10 CLA N/A GO:0009521 ... N/A 31358960
    10733 6j3z:b (3.6) BS11 CLA N/A GO:0009521 ... N/A 31358960
    10734 6j3z:b (3.6) BS12 CLA N/A GO:0009521 ... N/A 31358960
    10735 6j3z:b (3.6) BS13 CLA N/A GO:0009521 ... N/A 31358960
    10736 6j3z:b (3.6) BS14 CLA N/A GO:0009521 ... N/A 31358960
    10737 6j3z:b (3.6) BS15 CLA N/A GO:0009521 ... N/A 31358960
    10738 6j3z:b (3.6) BS16 CLA N/A GO:0009521 ... N/A 31358960
    10739 6j3z:c (3.6) BS02 CLA N/A GO:0009521 ... N/A 31358960
    10740 6j3z:c (3.6) BS03 CLA N/A GO:0009521 ... N/A 31358960
    10741 6j3z:c (3.6) BS04 CLA N/A GO:0009521 ... N/A 31358960
    10742 6j3z:c (3.6) BS05 CLA N/A GO:0009521 ... N/A 31358960
    10743 6j3z:c (3.6) BS06 CLA N/A GO:0009521 ... N/A 31358960
    10744 6j3z:c (3.6) BS07 CLA N/A GO:0009521 ... N/A 31358960
    10745 6j3z:c (3.6) BS08 CLA N/A GO:0009521 ... N/A 31358960
    10746 6j3z:c (3.6) BS09 CLA N/A GO:0009521 ... N/A 31358960
    10747 6j3z:c (3.6) BS10 CLA N/A GO:0009521 ... N/A 31358960
    10748 6j3z:c (3.6) BS11 CLA N/A GO:0009521 ... N/A 31358960
    10749 6j3z:c (3.6) BS12 CLA N/A GO:0009521 ... N/A 31358960
    10750 6j3z:c (3.6) BS13 CLA N/A GO:0009521 ... N/A 31358960
    10751 6j3z:c (3.6) BS14 CLA N/A GO:0009521 ... N/A 31358960
    10752 6j3z:c (3.6) BS15 CLA N/A GO:0009521 ... N/A 31358960
    10753 6j3z:d (3.6) BS04 CLA N/A GO:0009523 ... N/A 31358960
    10754 6j3z:d (3.6) BS05 CLA N/A GO:0009523 ... N/A 31358960
    10755 6j3z:d (3.6) BS06 CLA N/A GO:0009523 ... N/A 31358960
    10756 6j3z:d (3.6) BS09 CLA N/A GO:0009523 ... N/A 31358960
    10757 6j3z:d (3.6) BS10 CLA N/A GO:0009523 ... N/A 31358960
    10758 6j3z:h (3.6) BS01 CLA ? GO:0009507 ... B7XBY7 31358960
    10759 6j3z:h (3.6) BS02 CLA ? GO:0009507 ... B7XBY7 31358960
    10760 6j3z:i (3.6) BS01 CLA N/A GO:0009523 ... N/A 31358960
    10761 6j3z:i (3.6) BS02 CLA N/A GO:0009523 ... N/A 31358960
    10762 6j3z:k (3.6) BS01 CLA N/A GO:0009523 ... N/A 31358960
    10763 6j3z:k (3.6) BS02 CLA N/A GO:0009523 ... N/A 31358960
    10764 6j3z:w (3.6) BS01 CLA N/A N/A N/A 31358960
    10765 6j3z:w (3.6) BS02 CLA N/A N/A N/A 31358960
    10766 6j3z:z (3.6) BS01 CLA N/A GO:0009523 ... N/A 31358960
    10767 6j3z:z (3.6) BS02 CLA N/A GO:0009523 ... N/A 31358960
    10768 6j40:11 (3.8) BS01 CLA N/A GO:0009765 ... N/A 31358960
    10769 6j40:11 (3.8) BS02 CLA N/A GO:0009765 ... N/A 31358960
    10770 6j40:11 (3.8) BS03 CLA N/A GO:0009765 ... N/A 31358960
    10771 6j40:11 (3.8) BS04 CLA N/A GO:0009765 ... N/A 31358960
    10772 6j40:11 (3.8) BS05 CLA N/A GO:0009765 ... N/A 31358960
    10773 6j40:11 (3.8) BS06 CLA N/A GO:0009765 ... N/A 31358960
    10774 6j40:11 (3.8) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10775 6j40:11 (3.8) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10776 6j40:11 (3.8) BS09 CLA N/A GO:0009765 ... N/A 31358960
    10777 6j40:11 (3.8) BS10 CLA N/A GO:0009765 ... N/A 31358960
    10778 6j40:11 (3.8) BS16 CLA N/A GO:0009765 ... N/A 31358960
    10779 6j40:11 (3.8) BS18 CLA N/A GO:0009765 ... N/A 31358960
    10780 6j40:12 (3.8) BS01 CLA N/A GO:0009765 ... N/A 31358960
    10781 6j40:12 (3.8) BS03 CLA N/A GO:0009765 ... N/A 31358960
    10782 6j40:12 (3.8) BS04 CLA N/A GO:0009765 ... N/A 31358960
    10783 6j40:12 (3.8) BS05 CLA N/A GO:0009765 ... N/A 31358960
    10784 6j40:12 (3.8) BS06 CLA N/A GO:0009765 ... N/A 31358960
    10785 6j40:12 (3.8) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10786 6j40:12 (3.8) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10787 6j40:12 (3.8) BS09 CLA N/A GO:0009765 ... N/A 31358960
    10788 6j40:12 (3.8) BS10 CLA N/A GO:0009765 ... N/A 31358960
    10789 6j40:12 (3.8) BS11 CLA N/A GO:0009765 ... N/A 31358960
    10790 6j40:12 (3.8) BS12 CLA N/A GO:0009765 ... N/A 31358960
    10791 6j40:13 (3.8) BS02 CLA N/A GO:0009765 ... N/A 31358960
    10792 6j40:13 (3.8) BS03 CLA N/A GO:0009765 ... N/A 31358960
    10793 6j40:13 (3.8) BS04 CLA N/A GO:0009765 ... N/A 31358960
    10794 6j40:13 (3.8) BS05 CLA N/A GO:0009765 ... N/A 31358960
    10795 6j40:13 (3.8) BS06 CLA N/A GO:0009765 ... N/A 31358960
    10796 6j40:13 (3.8) BS07 CLA N/A GO:0009765 ... N/A 31358960
    10797 6j40:13 (3.8) BS08 CLA N/A GO:0009765 ... N/A 31358960
    10798 6j40:13 (3.8) BS09 CLA N/A GO:0009765 ... N/A 31358960
    10799 6j40:13 (3.8) BS10 CLA N/A GO:0009765 ... N/A 31358960
    10800 6j40:13 (3.8) BS18 CLA N/A GO:0009765 ... N/A 31358960
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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