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BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    45001 8j7b:2 (3.22) BS13 CLA ? GO:0005515 ... Q9SYW8 37936349
    45002 8j7b:2 (3.22) BS14 CLA ? GO:0005515 ... Q9SYW8 37936349
    45003 8j7b:2 (3.22) BS15 CLA ? GO:0005515 ... Q9SYW8 37936349
    45004 8j7b:3 (3.22) BS02 CLA ? GO:0003729 ... Q9SY97 37936349
    45005 8j7b:3 (3.22) BS03 CLA ? GO:0003729 ... Q9SY97 37936349
    45006 8j7b:3 (3.22) BS05 CLA ? GO:0003729 ... Q9SY97 37936349
    45007 8j7b:3 (3.22) BS06 CLA ? GO:0003729 ... Q9SY97 37936349
    45008 8j7b:3 (3.22) BS07 CLA ? GO:0003729 ... Q9SY97 37936349
    45009 8j7b:3 (3.22) BS08 CLA ? GO:0003729 ... Q9SY97 37936349
    45010 8j7b:3 (3.22) BS09 CLA ? GO:0003729 ... Q9SY97 37936349
    45011 8j7b:3 (3.22) BS10 CLA ? GO:0003729 ... Q9SY97 37936349
    45012 8j7b:3 (3.22) BS11 CLA ? GO:0003729 ... Q9SY97 37936349
    45013 8j7b:3 (3.22) BS12 CLA ? GO:0003729 ... Q9SY97 37936349
    45014 8j7b:3 (3.22) BS13 CLA ? GO:0003729 ... Q9SY97 37936349
    45015 8j7b:4 (3.22) BS03 CLA ? GO:0003729 ... P27521 37936349
    45016 8j7b:4 (3.22) BS04 CLA ? GO:0003729 ... P27521 37936349
    45017 8j7b:4 (3.22) BS06 CLA ? GO:0003729 ... P27521 37936349
    45018 8j7b:4 (3.22) BS08 CLA ? GO:0003729 ... P27521 37936349
    45019 8j7b:4 (3.22) BS10 CLA ? GO:0003729 ... P27521 37936349
    45020 8j7b:4 (3.22) BS11 CLA ? GO:0003729 ... P27521 37936349
    45021 8j7b:4 (3.22) BS12 CLA ? GO:0003729 ... P27521 37936349
    45022 8j7b:4 (3.22) BS13 CLA ? GO:0003729 ... P27521 37936349
    45023 8j7b:4 (3.22) BS14 CLA ? GO:0003729 ... P27521 37936349
    45024 8j7b:4 (3.22) BS15 CLA ? GO:0003729 ... P27521 37936349
    45025 8j7b:4 (3.22) BS16 CLA ? GO:0003729 ... P27521 37936349
    45026 8j7b:A (3.22) BS01 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45027 8j7b:A (3.22) BS02 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45028 8j7b:A (3.22) BS03 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45029 8j7b:A (3.22) BS04 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45030 8j7b:A (3.22) BS05 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45031 8j7b:A (3.22) BS06 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45032 8j7b:A (3.22) BS07 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45033 8j7b:A (3.22) BS08 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45034 8j7b:A (3.22) BS09 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45035 8j7b:A (3.22) BS11 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45036 8j7b:A (3.22) BS12 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45037 8j7b:A (3.22) BS13 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45038 8j7b:A (3.22) BS14 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45039 8j7b:A (3.22) BS15 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45040 8j7b:A (3.22) BS16 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45041 8j7b:A (3.22) BS17 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45042 8j7b:A (3.22) BS18 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45043 8j7b:A (3.22) BS19 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45044 8j7b:A (3.22) BS20 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45045 8j7b:A (3.22) BS21 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45046 8j7b:A (3.22) BS22 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45047 8j7b:A (3.22) BS23 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45048 8j7b:A (3.22) BS24 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45049 8j7b:A (3.22) BS25 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45050 8j7b:A (3.22) BS26 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45051 8j7b:A (3.22) BS27 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45052 8j7b:A (3.22) BS28 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45053 8j7b:A (3.22) BS31 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45054 8j7b:A (3.22) BS32 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45055 8j7b:A (3.22) BS33 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45056 8j7b:A (3.22) BS34 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45057 8j7b:A (3.22) BS35 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45058 8j7b:A (3.22) BS36 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45059 8j7b:A (3.22) BS37 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45060 8j7b:A (3.22) BS38 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45061 8j7b:A (3.22) BS39 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45062 8j7b:A (3.22) BS40 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45063 8j7b:A (3.22) BS41 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45064 8j7b:A (3.22) BS42 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45065 8j7b:A (3.22) BS43 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45066 8j7b:A (3.22) BS44 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45067 8j7b:A (3.22) BS45 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45068 8j7b:A (3.22) BS46 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45069 8j7b:A (3.22) BS47 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45070 8j7b:A (3.22) BS48 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45071 8j7b:A (3.22) BS49 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45072 8j7b:A (3.22) BS50 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    45073 8j7b:B (3.22) BS01 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45074 8j7b:B (3.22) BS02 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45075 8j7b:B (3.22) BS03 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45076 8j7b:B (3.22) BS05 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45077 8j7b:B (3.22) BS06 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45078 8j7b:B (3.22) BS07 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45079 8j7b:B (3.22) BS08 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45080 8j7b:B (3.22) BS09 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45081 8j7b:B (3.22) BS10 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45082 8j7b:B (3.22) BS11 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45083 8j7b:B (3.22) BS12 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45084 8j7b:B (3.22) BS13 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45085 8j7b:B (3.22) BS14 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45086 8j7b:B (3.22) BS15 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45087 8j7b:B (3.22) BS16 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45088 8j7b:B (3.22) BS17 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45089 8j7b:B (3.22) BS18 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45090 8j7b:B (3.22) BS19 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45091 8j7b:B (3.22) BS20 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45092 8j7b:B (3.22) BS21 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45093 8j7b:B (3.22) BS22 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45094 8j7b:B (3.22) BS23 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45095 8j7b:B (3.22) BS25 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45096 8j7b:B (3.22) BS26 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45097 8j7b:B (3.22) BS27 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45098 8j7b:B (3.22) BS28 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45099 8j7b:B (3.22) BS29 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45100 8j7b:B (3.22) BS30 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45101 8j7b:B (3.22) BS31 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45102 8j7b:B (3.22) BS32 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45103 8j7b:B (3.22) BS33 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45104 8j7b:B (3.22) BS34 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45105 8j7b:B (3.22) BS35 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45106 8j7b:B (3.22) BS36 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45107 8j7b:B (3.22) BS37 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45108 8j7b:B (3.22) BS38 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45109 8j7b:B (3.22) BS39 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45110 8j7b:B (3.22) BS40 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45111 8j7b:B (3.22) BS41 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45112 8j7b:B (3.22) BS42 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45113 8j7b:B (3.22) BS43 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45114 8j7b:B (3.22) BS44 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    45115 8j7b:F (3.22) BS01 CLA ? GO:0003729 ... Q9SHE8 37936349
    45116 8j7b:F (3.22) BS02 CLA ? GO:0003729 ... Q9SHE8 37936349
    45117 8j7b:F (3.22) BS03 CLA ? GO:0003729 ... Q9SHE8 37936349
    45118 8j7b:F (3.22) BS04 CLA ? GO:0003729 ... Q9SHE8 37936349
    45119 8j7b:F (3.22) BS05 CLA ? GO:0003729 ... Q9SHE8 37936349
    45120 8j7b:G (3.22) BS01 CLA ? GO:0005515 ... Q9S7N7 37936349
    45121 8j7b:G (3.22) BS02 CLA ? GO:0005515 ... Q9S7N7 37936349
    45122 8j7b:G (3.22) BS03 CLA ? GO:0005515 ... Q9S7N7 37936349
    45123 8j7b:H (3.22) BS01 CLA ? GO:0005634 ... Q9SUI6 37936349
    45124 8j7b:H (3.22) BS02 CLA ? GO:0005634 ... Q9SUI6 37936349
    45125 8j7b:I (3.22) BS01 CLA ? GO:0003674 ... P56768 37936349
    45126 8j7b:I (3.22) BS02 CLA ? GO:0003674 ... P56768 37936349
    45127 8j7b:J (3.22) BS01 CLA ? GO:0003674 ... P56769 37936349
    45128 8j7b:J (3.22) BS02 CLA ? GO:0003674 ... P56769 37936349
    45129 8j7b:J (3.22) BS03 CLA ? GO:0003674 ... P56769 37936349
    45130 8j7b:K (3.22) BS01 CLA ? GO:0005634 ... Q9SUI5 37936349
    45131 8j7b:K (3.22) BS02 CLA ? GO:0005634 ... Q9SUI5 37936349
    45132 8j7b:K (3.22) BS03 CLA ? GO:0005634 ... Q9SUI5 37936349
    45133 8j7b:K (3.22) BS04 CLA ? GO:0005634 ... Q9SUI5 37936349
    45134 8j7b:L (3.22) BS01 CLA ? GO:0003729 ... Q9SUI4 37936349
    45135 8j7b:L (3.22) BS02 CLA ? GO:0003729 ... Q9SUI4 37936349
    45136 8j7b:L (3.22) BS03 CLA ? GO:0003729 ... Q9SUI4 37936349
    45137 8j7b:L (3.22) BS04 CLA ? GO:0003729 ... Q9SUI4 37936349
    45138 8j7b:L (3.22) BS05 CLA ? GO:0003729 ... Q9SUI4 37936349
    45139 8j7b:L (3.22) BS06 CLA ? GO:0003729 ... Q9SUI4 37936349
    45140 8j7z:A (2.72) BS08 CLA ? GO:0009416 ... O65890 38071196
    45141 8j7z:A (2.72) BS09 CLA ? GO:0009416 ... O65890 38071196
    45142 8j7z:A (2.72) BS11 CLA ? GO:0009416 ... O65890 38071196
    45143 8j7z:A (2.72) BS13 CLA ? GO:0009416 ... O65890 38071196
    45144 8j7z:A (2.72) BS14 CLA ? GO:0009416 ... O65890 38071196
    45145 8j7z:A (2.72) BS16 CLA ? GO:0009416 ... O65890 38071196
    45146 8j7z:A (2.72) BS17 CLA ? GO:0009416 ... O65890 38071196
    45147 8j7z:A (2.72) BS18 CLA ? GO:0009416 ... O65890 38071196
    45148 8j7z:A (2.72) BS19 CLA ? GO:0009416 ... O65890 38071196
    45149 8j7z:B (2.72) BS01 CLA ? GO:0009416 ... O65890 38071196
    45150 8j7z:B (2.72) BS09 CLA ? GO:0009416 ... O65890 38071196
    45151 8j7z:B (2.72) BS10 CLA ? GO:0009416 ... O65890 38071196
    45152 8j7z:B (2.72) BS12 CLA ? GO:0009416 ... O65890 38071196
    45153 8j7z:B (2.72) BS14 CLA ? GO:0009416 ... O65890 38071196
    45154 8j7z:B (2.72) BS15 CLA ? GO:0009416 ... O65890 38071196
    45155 8j7z:B (2.72) BS17 CLA ? GO:0009416 ... O65890 38071196
    45156 8j7z:B (2.72) BS18 CLA ? GO:0009416 ... O65890 38071196
    45157 8j7z:B (2.72) BS19 CLA ? GO:0009416 ... O65890 38071196
    45158 8j7z:C (2.72) BS01 CLA ? GO:0009416 ... O65890 38071196
    45159 8j7z:C (2.72) BS02 CLA ? GO:0009416 ... O65890 38071196
    45160 8j7z:C (2.72) BS10 CLA ? GO:0009416 ... O65890 38071196
    45161 8j7z:C (2.72) BS11 CLA ? GO:0009416 ... O65890 38071196
    45162 8j7z:C (2.72) BS13 CLA ? GO:0009416 ... O65890 38071196
    45163 8j7z:C (2.72) BS15 CLA ? GO:0009416 ... O65890 38071196
    45164 8j7z:C (2.72) BS16 CLA ? GO:0009416 ... O65890 38071196
    45165 8j7z:C (2.72) BS18 CLA ? GO:0009416 ... O65890 38071196
    45166 8j7z:C (2.72) BS19 CLA ? GO:0009416 ... O65890 38071196
    45167 8jjr:A (2.8) BS01 CLA N/A GO:0009765 ... A0AA36I308 38493166
    45168 8jjr:A (2.8) BS02 CLA N/A GO:0009765 ... A0AA36I308 38493166
    45169 8jjr:A (2.8) BS03 CLA N/A GO:0009765 ... A0AA36I308 38493166
    45170 8jjr:A (2.8) BS04 CLA N/A GO:0009765 ... A0AA36I308 38493166
    45171 8jjr:A (2.8) BS05 CLA N/A GO:0009765 ... A0AA36I308 38493166
    45172 8jjr:A (2.8) BS06 CLA N/A GO:0009765 ... A0AA36I308 38493166
    45173 8jjr:A (2.8) BS07 CLA N/A GO:0009765 ... A0AA36I308 38493166
    45174 8jjr:A (2.8) BS09 CLA N/A GO:0009765 ... A0AA36I308 38493166
    45175 8jjr:A (2.8) BS10 CLA N/A GO:0009765 ... A0AA36I308 38493166
    45176 8jjr:A (2.8) BS11 CLA N/A GO:0009765 ... A0AA36I308 38493166
    45177 8jjr:A (2.8) BS12 CLA N/A GO:0009765 ... A0AA36I308 38493166
    45178 8jjr:A (2.8) BS18 CLA N/A GO:0009765 ... A0AA36I308 38493166
    45179 8jjr:B (2.8) BS01 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45180 8jjr:B (2.8) BS03 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45181 8jjr:B (2.8) BS04 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45182 8jjr:B (2.8) BS05 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45183 8jjr:B (2.8) BS06 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45184 8jjr:B (2.8) BS07 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45185 8jjr:B (2.8) BS09 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45186 8jjr:B (2.8) BS10 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45187 8jjr:B (2.8) BS15 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45188 8jjr:B (2.8) BS17 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45189 8jjr:C (2.8) BS01 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45190 8jjr:C (2.8) BS02 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45191 8jjr:C (2.8) BS03 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45192 8jjr:C (2.8) BS04 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45193 8jjr:C (2.8) BS05 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45194 8jjr:C (2.8) BS06 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45195 8jjr:C (2.8) BS07 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45196 8jjr:C (2.8) BS08 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45197 8jjr:C (2.8) BS09 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45198 8jjr:C (2.8) BS11 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45199 8jjr:C (2.8) BS12 CLA N/A GO:0009765 ... A0AA36MZ23 38493166
    45200 8jjr:C (2.8) BS18 CLA N/A GO:0009765 ... A0AA36MZ23 38493166

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218