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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    4001 4v82:AB (3.2) BS02 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4002 4v82:AB (3.2) BS03 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4003 4v82:AB (3.2) BS04 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4004 4v82:AB (3.2) BS05 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4005 4v82:AB (3.2) BS06 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4006 4v82:AB (3.2) BS07 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4007 4v82:AB (3.2) BS08 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4008 4v82:AB (3.2) BS09 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4009 4v82:AB (3.2) BS10 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4010 4v82:AB (3.2) BS11 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4011 4v82:AB (3.2) BS12 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4012 4v82:AB (3.2) BS13 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4013 4v82:AB (3.2) BS14 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4014 4v82:AB (3.2) BS15 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4015 4v82:AB (3.2) BS16 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4016 4v82:AC (3.2) BS01 CLA ? GO:0005737 ... Q8DIF8 21367867
    4017 4v82:AC (3.2) BS02 CLA ? GO:0005737 ... Q8DIF8 21367867
    4018 4v82:AC (3.2) BS03 CLA ? GO:0005737 ... Q8DIF8 21367867
    4019 4v82:AC (3.2) BS04 CLA ? GO:0005737 ... Q8DIF8 21367867
    4020 4v82:AC (3.2) BS05 CLA ? GO:0005737 ... Q8DIF8 21367867
    4021 4v82:AC (3.2) BS06 CLA ? GO:0005737 ... Q8DIF8 21367867
    4022 4v82:AC (3.2) BS07 CLA ? GO:0005737 ... Q8DIF8 21367867
    4023 4v82:AC (3.2) BS08 CLA ? GO:0005737 ... Q8DIF8 21367867
    4024 4v82:AC (3.2) BS09 CLA ? GO:0005737 ... Q8DIF8 21367867
    4025 4v82:AC (3.2) BS10 CLA ? GO:0005737 ... Q8DIF8 21367867
    4026 4v82:AC (3.2) BS11 CLA ? GO:0005737 ... Q8DIF8 21367867
    4027 4v82:AC (3.2) BS12 CLA ? GO:0005737 ... Q8DIF8 21367867
    4028 4v82:AC (3.2) BS13 CLA ? GO:0005737 ... Q8DIF8 21367867
    4029 4v82:AD (3.2) BS03 CLA 1.10.3.9 GO:0005506 ... Q8CM25 21367867
    4030 4v82:AD (3.2) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 21367867
    4031 4v82:AD (3.2) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 21367867
    4032 4v82:AD (3.2) BS06 CLA 1.10.3.9 GO:0005506 ... Q8CM25 21367867
    4033 4v82:AD (3.2) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 21367867
    4034 4v82:AH (3.2) BS01 CLA ? GO:0009523 ... Q8DJ43 21367867
    4035 4v82:AH (3.2) BS02 CLA ? GO:0009523 ... Q8DJ43 21367867
    4036 4v82:AH (3.2) BS03 CLA ? GO:0009523 ... Q8DJ43 21367867
    4037 4v82:AH (3.2) BS04 CLA ? GO:0009523 ... Q8DJ43 21367867
    4038 4v82:AI (3.2) BS01 CLA ? GO:0005737 ... Q8DJZ6 21367867
    4039 4v82:AI (3.2) BS02 CLA ? GO:0005737 ... Q8DJZ6 21367867
    4040 4v82:AK (3.2) BS02 CLA ? GO:0009523 ... Q9F1K9 21367867
    4041 4v82:AK (3.2) BS03 CLA ? GO:0009523 ... Q9F1K9 21367867
    4042 4v82:AZ (3.2) BS02 CLA ? GO:0009523 ... Q8DHJ2 21367867
    4043 4v82:BA (3.2) BS02 CLA 1.10.3.9 GO:0005506 ... P0A444 21367867
    4044 4v82:BA (3.2) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 21367867
    4045 4v82:BA (3.2) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 21367867
    4046 4v82:BA (3.2) BS05 CLA 1.10.3.9 GO:0005506 ... P0A444 21367867
    4047 4v82:BA (3.2) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 21367867
    4048 4v82:BB (3.2) BS01 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4049 4v82:BB (3.2) BS02 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4050 4v82:BB (3.2) BS03 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4051 4v82:BB (3.2) BS04 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4052 4v82:BB (3.2) BS05 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4053 4v82:BB (3.2) BS06 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4054 4v82:BB (3.2) BS07 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4055 4v82:BB (3.2) BS08 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4056 4v82:BB (3.2) BS09 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4057 4v82:BB (3.2) BS10 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4058 4v82:BB (3.2) BS11 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4059 4v82:BB (3.2) BS12 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4060 4v82:BB (3.2) BS13 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4061 4v82:BB (3.2) BS14 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4062 4v82:BB (3.2) BS15 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4063 4v82:BB (3.2) BS16 CLA ? GO:0009521 ... Q8DIQ1 21367867
    4064 4v82:BC (3.2) BS01 CLA ? GO:0005737 ... Q8DIF8 21367867
    4065 4v82:BC (3.2) BS02 CLA ? GO:0005737 ... Q8DIF8 21367867
    4066 4v82:BC (3.2) BS03 CLA ? GO:0005737 ... Q8DIF8 21367867
    4067 4v82:BC (3.2) BS04 CLA ? GO:0005737 ... Q8DIF8 21367867
    4068 4v82:BC (3.2) BS05 CLA ? GO:0005737 ... Q8DIF8 21367867
    4069 4v82:BC (3.2) BS06 CLA ? GO:0005737 ... Q8DIF8 21367867
    4070 4v82:BC (3.2) BS07 CLA ? GO:0005737 ... Q8DIF8 21367867
    4071 4v82:BC (3.2) BS08 CLA ? GO:0005737 ... Q8DIF8 21367867
    4072 4v82:BC (3.2) BS09 CLA ? GO:0005737 ... Q8DIF8 21367867
    4073 4v82:BC (3.2) BS10 CLA ? GO:0005737 ... Q8DIF8 21367867
    4074 4v82:BC (3.2) BS11 CLA ? GO:0005737 ... Q8DIF8 21367867
    4075 4v82:BC (3.2) BS12 CLA ? GO:0005737 ... Q8DIF8 21367867
    4076 4v82:BC (3.2) BS13 CLA ? GO:0005737 ... Q8DIF8 21367867
    4077 4v82:BD (3.2) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 21367867
    4078 4v82:BD (3.2) BS03 CLA 1.10.3.9 GO:0005506 ... Q8CM25 21367867
    4079 4v82:BD (3.2) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 21367867
    4080 4v82:BD (3.2) BS06 CLA 1.10.3.9 GO:0005506 ... Q8CM25 21367867
    4081 4v82:BD (3.2) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 21367867
    4082 4v82:BH (3.2) BS01 CLA ? GO:0009523 ... Q8DJ43 21367867
    4083 4v82:BH (3.2) BS02 CLA ? GO:0009523 ... Q8DJ43 21367867
    4084 4v82:BH (3.2) BS03 CLA ? GO:0009523 ... Q8DJ43 21367867
    4085 4v82:BH (3.2) BS04 CLA ? GO:0009523 ... Q8DJ43 21367867
    4086 4v82:BI (3.2) BS01 CLA ? GO:0005737 ... Q8DJZ6 21367867
    4087 4v82:BI (3.2) BS02 CLA ? GO:0005737 ... Q8DJZ6 21367867
    4088 4v82:BK (3.2) BS02 CLA ? GO:0009523 ... Q9F1K9 21367867
    4089 4v82:BK (3.2) BS03 CLA ? GO:0009523 ... Q9F1K9 21367867
    4090 4v82:BZ (3.2) BS02 CLA ? GO:0009523 ... Q8DHJ2 21367867
    4091 4xk8:1 (2.8) BS01 CLA ? GO:0009765 ... Q01667 26023133
    4092 4xk8:1 (2.8) BS03 CLA ? GO:0009765 ... Q01667 26023133
    4093 4xk8:1 (2.8) BS04 CLA ? GO:0009765 ... Q01667 26023133
    4094 4xk8:1 (2.8) BS05 CLA ? GO:0009765 ... Q01667 26023133
    4095 4xk8:1 (2.8) BS06 CLA ? GO:0009765 ... Q01667 26023133
    4096 4xk8:1 (2.8) BS08 CLA ? GO:0009765 ... Q01667 26023133
    4097 4xk8:1 (2.8) BS09 CLA ? GO:0009765 ... Q01667 26023133
    4098 4xk8:1 (2.8) BS10 CLA ? GO:0009765 ... Q01667 26023133
    4099 4xk8:1 (2.8) BS11 CLA ? GO:0009765 ... Q01667 26023133
    4100 4xk8:1 (2.8) BS12 CLA ? GO:0009765 ... Q01667 26023133
    4101 4xk8:1 (2.8) BS13 CLA ? GO:0009765 ... Q01667 26023133
    4102 4xk8:1 (2.8) BS14 CLA ? GO:0009765 ... Q01667 26023133
    4103 4xk8:2 (2.8) BS02 CLA ? GO:0009765 ... Q41038 26023133
    4104 4xk8:2 (2.8) BS03 CLA ? GO:0009765 ... Q41038 26023133
    4105 4xk8:2 (2.8) BS04 CLA ? GO:0009765 ... Q41038 26023133
    4106 4xk8:2 (2.8) BS08 CLA ? GO:0009765 ... Q41038 26023133
    4107 4xk8:2 (2.8) BS09 CLA ? GO:0009765 ... Q41038 26023133
    4108 4xk8:2 (2.8) BS10 CLA ? GO:0009765 ... Q41038 26023133
    4109 4xk8:2 (2.8) BS11 CLA ? GO:0009765 ... Q41038 26023133
    4110 4xk8:2 (2.8) BS12 CLA ? GO:0009765 ... Q41038 26023133
    4111 4xk8:2 (2.8) BS13 CLA ? GO:0009765 ... Q41038 26023133
    4112 4xk8:2 (2.8) BS15 CLA ? GO:0009765 ... Q41038 26023133
    4113 4xk8:2 (2.8) BS16 CLA ? GO:0009765 ... Q41038 26023133
    4114 4xk8:3 (2.8) BS01 CLA ? GO:0009765 ... Q32904 26023133
    4115 4xk8:3 (2.8) BS02 CLA ? GO:0009765 ... Q32904 26023133
    4116 4xk8:3 (2.8) BS03 CLA ? GO:0009765 ... Q32904 26023133
    4117 4xk8:3 (2.8) BS05 CLA ? GO:0009765 ... Q32904 26023133
    4118 4xk8:3 (2.8) BS06 CLA ? GO:0009765 ... Q32904 26023133
    4119 4xk8:3 (2.8) BS07 CLA ? GO:0009765 ... Q32904 26023133
    4120 4xk8:3 (2.8) BS08 CLA ? GO:0009765 ... Q32904 26023133
    4121 4xk8:3 (2.8) BS09 CLA ? GO:0009765 ... Q32904 26023133
    4122 4xk8:3 (2.8) BS11 CLA ? GO:0009765 ... Q32904 26023133
    4123 4xk8:3 (2.8) BS12 CLA ? GO:0009765 ... Q32904 26023133
    4124 4xk8:3 (2.8) BS13 CLA ? GO:0009765 ... Q32904 26023133
    4125 4xk8:3 (2.8) BS14 CLA ? GO:0009765 ... Q32904 26023133
    4126 4xk8:3 (2.8) BS15 CLA ? GO:0009765 ... Q32904 26023133
    4127 4xk8:3 (2.8) BS16 CLA ? GO:0009765 ... Q32904 26023133
    4128 4xk8:4 (2.8) BS02 CLA ? GO:0009765 ... Q9SQL2 26023133
    4129 4xk8:4 (2.8) BS03 CLA ? GO:0009765 ... Q9SQL2 26023133
    4130 4xk8:4 (2.8) BS04 CLA ? GO:0009765 ... Q9SQL2 26023133
    4131 4xk8:4 (2.8) BS05 CLA ? GO:0009765 ... Q9SQL2 26023133
    4132 4xk8:4 (2.8) BS06 CLA ? GO:0009765 ... Q9SQL2 26023133
    4133 4xk8:4 (2.8) BS10 CLA ? GO:0009765 ... Q9SQL2 26023133
    4134 4xk8:4 (2.8) BS11 CLA ? GO:0009765 ... Q9SQL2 26023133
    4135 4xk8:4 (2.8) BS12 CLA ? GO:0009765 ... Q9SQL2 26023133
    4136 4xk8:4 (2.8) BS13 CLA ? GO:0009765 ... Q9SQL2 26023133
    4137 4xk8:4 (2.8) BS14 CLA ? GO:0009765 ... Q9SQL2 26023133
    4138 4xk8:4 (2.8) BS15 CLA ? GO:0009765 ... Q9SQL2 26023133
    4139 4xk8:4 (2.8) BS16 CLA ? GO:0009765 ... Q9SQL2 26023133
    4140 4xk8:6 (2.8) BS01 CLA ? GO:0009765 ... Q01667 26023133
    4141 4xk8:6 (2.8) BS03 CLA ? GO:0009765 ... Q01667 26023133
    4142 4xk8:6 (2.8) BS04 CLA ? GO:0009765 ... Q01667 26023133
    4143 4xk8:6 (2.8) BS05 CLA ? GO:0009765 ... Q01667 26023133
    4144 4xk8:6 (2.8) BS06 CLA ? GO:0009765 ... Q01667 26023133
    4145 4xk8:6 (2.8) BS08 CLA ? GO:0009765 ... Q01667 26023133
    4146 4xk8:6 (2.8) BS09 CLA ? GO:0009765 ... Q01667 26023133
    4147 4xk8:6 (2.8) BS10 CLA ? GO:0009765 ... Q01667 26023133
    4148 4xk8:6 (2.8) BS11 CLA ? GO:0009765 ... Q01667 26023133
    4149 4xk8:6 (2.8) BS12 CLA ? GO:0009765 ... Q01667 26023133
    4150 4xk8:6 (2.8) BS13 CLA ? GO:0009765 ... Q01667 26023133
    4151 4xk8:6 (2.8) BS14 CLA ? GO:0009765 ... Q01667 26023133
    4152 4xk8:7 (2.8) BS02 CLA ? GO:0009765 ... Q41038 26023133
    4153 4xk8:7 (2.8) BS03 CLA ? GO:0009765 ... Q41038 26023133
    4154 4xk8:7 (2.8) BS04 CLA ? GO:0009765 ... Q41038 26023133
    4155 4xk8:7 (2.8) BS08 CLA ? GO:0009765 ... Q41038 26023133
    4156 4xk8:7 (2.8) BS09 CLA ? GO:0009765 ... Q41038 26023133
    4157 4xk8:7 (2.8) BS10 CLA ? GO:0009765 ... Q41038 26023133
    4158 4xk8:7 (2.8) BS11 CLA ? GO:0009765 ... Q41038 26023133
    4159 4xk8:7 (2.8) BS12 CLA ? GO:0009765 ... Q41038 26023133
    4160 4xk8:7 (2.8) BS13 CLA ? GO:0009765 ... Q41038 26023133
    4161 4xk8:7 (2.8) BS15 CLA ? GO:0009765 ... Q41038 26023133
    4162 4xk8:7 (2.8) BS16 CLA ? GO:0009765 ... Q41038 26023133
    4163 4xk8:8 (2.8) BS01 CLA ? GO:0009765 ... Q32904 26023133
    4164 4xk8:8 (2.8) BS02 CLA ? GO:0009765 ... Q32904 26023133
    4165 4xk8:8 (2.8) BS04 CLA ? GO:0009765 ... Q32904 26023133
    4166 4xk8:8 (2.8) BS05 CLA ? GO:0009765 ... Q32904 26023133
    4167 4xk8:8 (2.8) BS06 CLA ? GO:0009765 ... Q32904 26023133
    4168 4xk8:8 (2.8) BS07 CLA ? GO:0009765 ... Q32904 26023133
    4169 4xk8:8 (2.8) BS08 CLA ? GO:0009765 ... Q32904 26023133
    4170 4xk8:8 (2.8) BS10 CLA ? GO:0009765 ... Q32904 26023133
    4171 4xk8:8 (2.8) BS11 CLA ? GO:0009765 ... Q32904 26023133
    4172 4xk8:8 (2.8) BS12 CLA ? GO:0009765 ... Q32904 26023133
    4173 4xk8:8 (2.8) BS13 CLA ? GO:0009765 ... Q32904 26023133
    4174 4xk8:8 (2.8) BS14 CLA ? GO:0009765 ... Q32904 26023133
    4175 4xk8:8 (2.8) BS15 CLA ? GO:0009765 ... Q32904 26023133
    4176 4xk8:9 (2.8) BS02 CLA ? GO:0009765 ... Q9SQL2 26023133
    4177 4xk8:9 (2.8) BS03 CLA ? GO:0009765 ... Q9SQL2 26023133
    4178 4xk8:9 (2.8) BS04 CLA ? GO:0009765 ... Q9SQL2 26023133
    4179 4xk8:9 (2.8) BS05 CLA ? GO:0009765 ... Q9SQL2 26023133
    4180 4xk8:9 (2.8) BS09 CLA ? GO:0009765 ... Q9SQL2 26023133
    4181 4xk8:9 (2.8) BS10 CLA ? GO:0009765 ... Q9SQL2 26023133
    4182 4xk8:9 (2.8) BS11 CLA ? GO:0009765 ... Q9SQL2 26023133
    4183 4xk8:9 (2.8) BS12 CLA ? GO:0009765 ... Q9SQL2 26023133
    4184 4xk8:9 (2.8) BS13 CLA ? GO:0009765 ... Q9SQL2 26023133
    4185 4xk8:9 (2.8) BS14 CLA ? GO:0009765 ... Q9SQL2 26023133
    4186 4xk8:9 (2.8) BS15 CLA ? GO:0009765 ... Q9SQL2 26023133
    4187 4xk8:A (2.8) BS01 CLA 1.97.1.12 GO:0000287 ... P05310 26023133
    4188 4xk8:A (2.8) BS02 CLA 1.97.1.12 GO:0000287 ... P05310 26023133
    4189 4xk8:A (2.8) BS03 CLA 1.97.1.12 GO:0000287 ... P05310 26023133
    4190 4xk8:A (2.8) BS04 CLA 1.97.1.12 GO:0000287 ... P05310 26023133
    4191 4xk8:A (2.8) BS05 CLA 1.97.1.12 GO:0000287 ... P05310 26023133
    4192 4xk8:A (2.8) BS06 CLA 1.97.1.12 GO:0000287 ... P05310 26023133
    4193 4xk8:A (2.8) BS07 CLA 1.97.1.12 GO:0000287 ... P05310 26023133
    4194 4xk8:A (2.8) BS08 CLA 1.97.1.12 GO:0000287 ... P05310 26023133
    4195 4xk8:A (2.8) BS09 CLA 1.97.1.12 GO:0000287 ... P05310 26023133
    4196 4xk8:A (2.8) BS10 CLA 1.97.1.12 GO:0000287 ... P05310 26023133
    4197 4xk8:A (2.8) BS11 CLA 1.97.1.12 GO:0000287 ... P05310 26023133
    4198 4xk8:A (2.8) BS12 CLA 1.97.1.12 GO:0000287 ... P05310 26023133
    4199 4xk8:A (2.8) BS13 CLA 1.97.1.12 GO:0000287 ... P05310 26023133
    4200 4xk8:A (2.8) BS14 CLA 1.97.1.12 GO:0000287 ... P05310 26023133

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218