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BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    41601 8f4i:A (2.0) BS05 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41602 8f4i:A (2.0) BS07 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41603 8f4i:A (2.0) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41604 8f4i:B (2.0) BS01 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41605 8f4i:B (2.0) BS02 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41606 8f4i:B (2.0) BS03 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41607 8f4i:B (2.0) BS04 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41608 8f4i:B (2.0) BS05 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41609 8f4i:B (2.0) BS06 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41610 8f4i:B (2.0) BS07 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41611 8f4i:B (2.0) BS08 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41612 8f4i:B (2.0) BS09 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41613 8f4i:B (2.0) BS10 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41614 8f4i:B (2.0) BS11 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41615 8f4i:B (2.0) BS12 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41616 8f4i:B (2.0) BS13 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41617 8f4i:B (2.0) BS14 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41618 8f4i:B (2.0) BS15 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41619 8f4i:B (2.0) BS16 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41620 8f4i:C (2.0) BS03 CLA ? GO:0005737 ... Q8DIF8 37138085
    41621 8f4i:C (2.0) BS04 CLA ? GO:0005737 ... Q8DIF8 37138085
    41622 8f4i:C (2.0) BS05 CLA ? GO:0005737 ... Q8DIF8 37138085
    41623 8f4i:C (2.0) BS06 CLA ? GO:0005737 ... Q8DIF8 37138085
    41624 8f4i:C (2.0) BS07 CLA ? GO:0005737 ... Q8DIF8 37138085
    41625 8f4i:C (2.0) BS08 CLA ? GO:0005737 ... Q8DIF8 37138085
    41626 8f4i:C (2.0) BS09 CLA ? GO:0005737 ... Q8DIF8 37138085
    41627 8f4i:C (2.0) BS10 CLA ? GO:0005737 ... Q8DIF8 37138085
    41628 8f4i:C (2.0) BS11 CLA ? GO:0005737 ... Q8DIF8 37138085
    41629 8f4i:C (2.0) BS12 CLA ? GO:0005737 ... Q8DIF8 37138085
    41630 8f4i:C (2.0) BS13 CLA ? GO:0005737 ... Q8DIF8 37138085
    41631 8f4i:C (2.0) BS14 CLA ? GO:0005737 ... Q8DIF8 37138085
    41632 8f4i:C (2.0) BS15 CLA ? GO:0005737 ... Q8DIF8 37138085
    41633 8f4i:D (2.0) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41634 8f4i:D (2.0) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41635 8f4i:D (2.0) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41636 8f4i:D (2.0) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41637 8f4i:D (2.0) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41638 8f4i:H (2.0) BS01 CLA ? GO:0009523 ... Q8DJ43 37138085
    41639 8f4i:H (2.0) BS02 CLA ? GO:0009523 ... Q8DJ43 37138085
    41640 8f4i:H (2.0) BS03 CLA ? GO:0009523 ... Q8DJ43 37138085
    41641 8f4i:I (2.0) BS01 CLA ? GO:0005737 ... Q8DJZ6 37138085
    41642 8f4i:K (2.0) BS02 CLA ? GO:0005737 ... Q9F1K9 37138085
    41643 8f4i:K (2.0) BS03 CLA ? GO:0005737 ... Q9F1K9 37138085
    41644 8f4i:X (2.0) BS01 CLA ? GO:0009523 ... Q9F1R6 37138085
    41645 8f4i:a (2.0) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41646 8f4i:a (2.0) BS05 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41647 8f4i:a (2.0) BS07 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41648 8f4i:a (2.0) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41649 8f4i:b (2.0) BS01 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41650 8f4i:b (2.0) BS02 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41651 8f4i:b (2.0) BS03 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41652 8f4i:b (2.0) BS04 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41653 8f4i:b (2.0) BS05 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41654 8f4i:b (2.0) BS06 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41655 8f4i:b (2.0) BS07 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41656 8f4i:b (2.0) BS08 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41657 8f4i:b (2.0) BS09 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41658 8f4i:b (2.0) BS10 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41659 8f4i:b (2.0) BS11 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41660 8f4i:b (2.0) BS12 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41661 8f4i:b (2.0) BS13 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41662 8f4i:b (2.0) BS14 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41663 8f4i:b (2.0) BS15 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41664 8f4i:b (2.0) BS16 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41665 8f4i:c (2.0) BS03 CLA ? GO:0005737 ... Q8DIF8 37138085
    41666 8f4i:c (2.0) BS04 CLA ? GO:0005737 ... Q8DIF8 37138085
    41667 8f4i:c (2.0) BS05 CLA ? GO:0005737 ... Q8DIF8 37138085
    41668 8f4i:c (2.0) BS06 CLA ? GO:0005737 ... Q8DIF8 37138085
    41669 8f4i:c (2.0) BS07 CLA ? GO:0005737 ... Q8DIF8 37138085
    41670 8f4i:c (2.0) BS08 CLA ? GO:0005737 ... Q8DIF8 37138085
    41671 8f4i:c (2.0) BS09 CLA ? GO:0005737 ... Q8DIF8 37138085
    41672 8f4i:c (2.0) BS10 CLA ? GO:0005737 ... Q8DIF8 37138085
    41673 8f4i:c (2.0) BS11 CLA ? GO:0005737 ... Q8DIF8 37138085
    41674 8f4i:c (2.0) BS12 CLA ? GO:0005737 ... Q8DIF8 37138085
    41675 8f4i:c (2.0) BS13 CLA ? GO:0005737 ... Q8DIF8 37138085
    41676 8f4i:c (2.0) BS14 CLA ? GO:0005737 ... Q8DIF8 37138085
    41677 8f4i:c (2.0) BS15 CLA ? GO:0005737 ... Q8DIF8 37138085
    41678 8f4i:d (2.0) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41679 8f4i:d (2.0) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41680 8f4i:d (2.0) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41681 8f4i:d (2.0) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41682 8f4i:d (2.0) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41683 8f4i:h (2.0) BS01 CLA ? GO:0009523 ... Q8DJ43 37138085
    41684 8f4i:h (2.0) BS02 CLA ? GO:0009523 ... Q8DJ43 37138085
    41685 8f4i:h (2.0) BS03 CLA ? GO:0009523 ... Q8DJ43 37138085
    41686 8f4i:i (2.0) BS01 CLA ? GO:0005737 ... Q8DJZ6 37138085
    41687 8f4i:k (2.0) BS01 CLA ? GO:0005737 ... Q9F1K9 37138085
    41688 8f4i:k (2.0) BS02 CLA ? GO:0005737 ... Q9F1K9 37138085
    41689 8f4i:x (2.0) BS01 CLA ? GO:0009523 ... Q9F1R6 37138085
    41690 8f4j:A (2.0) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41691 8f4j:A (2.0) BS05 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41692 8f4j:A (2.0) BS07 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41693 8f4j:A (2.0) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41694 8f4j:A (2.0) BS09 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41695 8f4j:B (2.0) BS01 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41696 8f4j:B (2.0) BS02 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41697 8f4j:B (2.0) BS03 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41698 8f4j:B (2.0) BS04 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41699 8f4j:B (2.0) BS05 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41700 8f4j:B (2.0) BS06 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41701 8f4j:B (2.0) BS07 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41702 8f4j:B (2.0) BS08 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41703 8f4j:B (2.0) BS09 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41704 8f4j:B (2.0) BS10 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41705 8f4j:B (2.0) BS11 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41706 8f4j:B (2.0) BS12 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41707 8f4j:B (2.0) BS13 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41708 8f4j:B (2.0) BS14 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41709 8f4j:B (2.0) BS15 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41710 8f4j:B (2.0) BS16 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41711 8f4j:C (2.0) BS03 CLA ? GO:0005737 ... Q8DIF8 37138085
    41712 8f4j:C (2.0) BS04 CLA ? GO:0005737 ... Q8DIF8 37138085
    41713 8f4j:C (2.0) BS05 CLA ? GO:0005737 ... Q8DIF8 37138085
    41714 8f4j:C (2.0) BS06 CLA ? GO:0005737 ... Q8DIF8 37138085
    41715 8f4j:C (2.0) BS07 CLA ? GO:0005737 ... Q8DIF8 37138085
    41716 8f4j:C (2.0) BS08 CLA ? GO:0005737 ... Q8DIF8 37138085
    41717 8f4j:C (2.0) BS09 CLA ? GO:0005737 ... Q8DIF8 37138085
    41718 8f4j:C (2.0) BS10 CLA ? GO:0005737 ... Q8DIF8 37138085
    41719 8f4j:C (2.0) BS11 CLA ? GO:0005737 ... Q8DIF8 37138085
    41720 8f4j:C (2.0) BS12 CLA ? GO:0005737 ... Q8DIF8 37138085
    41721 8f4j:C (2.0) BS13 CLA ? GO:0005737 ... Q8DIF8 37138085
    41722 8f4j:C (2.0) BS14 CLA ? GO:0005737 ... Q8DIF8 37138085
    41723 8f4j:C (2.0) BS15 CLA ? GO:0005737 ... Q8DIF8 37138085
    41724 8f4j:D (2.0) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41725 8f4j:D (2.0) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41726 8f4j:D (2.0) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41727 8f4j:D (2.0) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41728 8f4j:D (2.0) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41729 8f4j:H (2.0) BS01 CLA ? GO:0009523 ... Q8DJ43 37138085
    41730 8f4j:H (2.0) BS02 CLA ? GO:0009523 ... Q8DJ43 37138085
    41731 8f4j:H (2.0) BS03 CLA ? GO:0009523 ... Q8DJ43 37138085
    41732 8f4j:H (2.0) BS04 CLA ? GO:0009523 ... Q8DJ43 37138085
    41733 8f4j:I (2.0) BS01 CLA ? GO:0005737 ... Q8DJZ6 37138085
    41734 8f4j:K (2.0) BS02 CLA ? GO:0005737 ... Q9F1K9 37138085
    41735 8f4j:X (2.0) BS01 CLA ? GO:0009523 ... Q9F1R6 37138085
    41736 8f4j:a (2.0) BS05 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41737 8f4j:a (2.0) BS06 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41738 8f4j:a (2.0) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41739 8f4j:a (2.0) BS09 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41740 8f4j:b (2.0) BS01 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41741 8f4j:b (2.0) BS02 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41742 8f4j:b (2.0) BS03 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41743 8f4j:b (2.0) BS04 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41744 8f4j:b (2.0) BS05 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41745 8f4j:b (2.0) BS06 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41746 8f4j:b (2.0) BS07 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41747 8f4j:b (2.0) BS08 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41748 8f4j:b (2.0) BS09 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41749 8f4j:b (2.0) BS10 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41750 8f4j:b (2.0) BS11 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41751 8f4j:b (2.0) BS12 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41752 8f4j:b (2.0) BS13 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41753 8f4j:b (2.0) BS14 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41754 8f4j:b (2.0) BS15 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41755 8f4j:b (2.0) BS16 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41756 8f4j:c (2.0) BS03 CLA ? GO:0005737 ... Q8DIF8 37138085
    41757 8f4j:c (2.0) BS04 CLA ? GO:0005737 ... Q8DIF8 37138085
    41758 8f4j:c (2.0) BS05 CLA ? GO:0005737 ... Q8DIF8 37138085
    41759 8f4j:c (2.0) BS06 CLA ? GO:0005737 ... Q8DIF8 37138085
    41760 8f4j:c (2.0) BS07 CLA ? GO:0005737 ... Q8DIF8 37138085
    41761 8f4j:c (2.0) BS08 CLA ? GO:0005737 ... Q8DIF8 37138085
    41762 8f4j:c (2.0) BS09 CLA ? GO:0005737 ... Q8DIF8 37138085
    41763 8f4j:c (2.0) BS10 CLA ? GO:0005737 ... Q8DIF8 37138085
    41764 8f4j:c (2.0) BS11 CLA ? GO:0005737 ... Q8DIF8 37138085
    41765 8f4j:c (2.0) BS12 CLA ? GO:0005737 ... Q8DIF8 37138085
    41766 8f4j:c (2.0) BS13 CLA ? GO:0005737 ... Q8DIF8 37138085
    41767 8f4j:c (2.0) BS14 CLA ? GO:0005737 ... Q8DIF8 37138085
    41768 8f4j:c (2.0) BS15 CLA ? GO:0005737 ... Q8DIF8 37138085
    41769 8f4j:d (2.0) BS03 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41770 8f4j:d (2.0) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41771 8f4j:d (2.0) BS06 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41772 8f4j:d (2.0) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41773 8f4j:d (2.0) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    41774 8f4j:h (2.0) BS01 CLA ? GO:0009523 ... Q8DJ43 37138085
    41775 8f4j:h (2.0) BS02 CLA ? GO:0009523 ... Q8DJ43 37138085
    41776 8f4j:h (2.0) BS03 CLA ? GO:0009523 ... Q8DJ43 37138085
    41777 8f4j:h (2.0) BS04 CLA ? GO:0009523 ... Q8DJ43 37138085
    41778 8f4j:i (2.0) BS01 CLA ? GO:0005737 ... Q8DJZ6 37138085
    41779 8f4j:k (2.0) BS01 CLA ? GO:0005737 ... Q9F1K9 37138085
    41780 8f4j:k (2.0) BS02 CLA ? GO:0005737 ... Q9F1K9 37138085
    41781 8f4j:x (2.0) BS01 CLA ? GO:0009523 ... Q9F1R6 37138085
    41782 8f4k:A (2.16) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41783 8f4k:A (2.16) BS05 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41784 8f4k:A (2.16) BS07 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41785 8f4k:A (2.16) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41786 8f4k:A (2.16) BS09 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    41787 8f4k:B (2.16) BS01 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41788 8f4k:B (2.16) BS02 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41789 8f4k:B (2.16) BS03 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41790 8f4k:B (2.16) BS04 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41791 8f4k:B (2.16) BS05 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41792 8f4k:B (2.16) BS06 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41793 8f4k:B (2.16) BS07 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41794 8f4k:B (2.16) BS08 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41795 8f4k:B (2.16) BS09 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41796 8f4k:B (2.16) BS10 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41797 8f4k:B (2.16) BS11 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41798 8f4k:B (2.16) BS12 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41799 8f4k:B (2.16) BS13 CLA ? GO:0009521 ... Q8DIQ1 37138085
    41800 8f4k:B (2.16) BS14 CLA ? GO:0009521 ... Q8DIQ1 37138085

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218