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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    38401 7yq2:D (1.9) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    38402 7yq2:H (1.9) BS01 CLA ? GO:0009523 ... Q8DJ43 36334624
    38403 7yq2:H (1.9) BS02 CLA ? GO:0009523 ... Q8DJ43 36334624
    38404 7yq2:H (1.9) BS03 CLA ? GO:0009523 ... Q8DJ43 36334624
    38405 7yq2:I (1.9) BS01 CLA ? GO:0005737 ... Q8DJZ6 36334624
    38406 7yq2:K (1.9) BS01 CLA ? GO:0005737 ... Q9F1K9 36334624
    38407 7yq2:K (1.9) BS02 CLA ? GO:0005737 ... Q9F1K9 36334624
    38408 7yq2:X (1.9) BS01 CLA ? GO:0009523 ... Q9F1R6 36334624
    38409 7yq2:Y (1.9) BS01 CLA ? GO:0009523 ... Q8DJI1 36334624
    38410 7yq2:a (1.9) BS04 CLA 1.10.3.9 GO:0005506 ... P0A446 36334624
    38411 7yq2:a (1.9) BS05 CLA 1.10.3.9 GO:0005506 ... P0A446 36334624
    38412 7yq2:a (1.9) BS08 CLA 1.10.3.9 GO:0005506 ... P0A446 36334624
    38413 7yq2:a (1.9) BS09 CLA 1.10.3.9 GO:0005506 ... P0A446 36334624
    38414 7yq2:a (1.9) BS10 CLA 1.10.3.9 GO:0005506 ... P0A446 36334624
    38415 7yq2:b (1.9) BS01 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38416 7yq2:b (1.9) BS02 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38417 7yq2:b (1.9) BS03 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38418 7yq2:b (1.9) BS04 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38419 7yq2:b (1.9) BS05 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38420 7yq2:b (1.9) BS06 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38421 7yq2:b (1.9) BS07 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38422 7yq2:b (1.9) BS08 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38423 7yq2:b (1.9) BS09 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38424 7yq2:b (1.9) BS10 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38425 7yq2:b (1.9) BS11 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38426 7yq2:b (1.9) BS12 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38427 7yq2:b (1.9) BS13 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38428 7yq2:b (1.9) BS14 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38429 7yq2:b (1.9) BS15 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38430 7yq2:b (1.9) BS16 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38431 7yq2:c (1.9) BS03 CLA ? GO:0005737 ... Q8DIF8 36334624
    38432 7yq2:c (1.9) BS04 CLA ? GO:0005737 ... Q8DIF8 36334624
    38433 7yq2:c (1.9) BS05 CLA ? GO:0005737 ... Q8DIF8 36334624
    38434 7yq2:c (1.9) BS06 CLA ? GO:0005737 ... Q8DIF8 36334624
    38435 7yq2:c (1.9) BS07 CLA ? GO:0005737 ... Q8DIF8 36334624
    38436 7yq2:c (1.9) BS08 CLA ? GO:0005737 ... Q8DIF8 36334624
    38437 7yq2:c (1.9) BS09 CLA ? GO:0005737 ... Q8DIF8 36334624
    38438 7yq2:c (1.9) BS10 CLA ? GO:0005737 ... Q8DIF8 36334624
    38439 7yq2:c (1.9) BS11 CLA ? GO:0005737 ... Q8DIF8 36334624
    38440 7yq2:c (1.9) BS12 CLA ? GO:0005737 ... Q8DIF8 36334624
    38441 7yq2:c (1.9) BS13 CLA ? GO:0005737 ... Q8DIF8 36334624
    38442 7yq2:c (1.9) BS14 CLA ? GO:0005737 ... Q8DIF8 36334624
    38443 7yq2:c (1.9) BS15 CLA ? GO:0005737 ... Q8DIF8 36334624
    38444 7yq2:d (1.9) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    38445 7yq2:d (1.9) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    38446 7yq2:d (1.9) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    38447 7yq2:d (1.9) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    38448 7yq2:d (1.9) BS10 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    38449 7yq2:h (1.9) BS01 CLA ? GO:0009523 ... Q8DJ43 36334624
    38450 7yq2:h (1.9) BS02 CLA ? GO:0009523 ... Q8DJ43 36334624
    38451 7yq2:h (1.9) BS03 CLA ? GO:0009523 ... Q8DJ43 36334624
    38452 7yq2:i (1.9) BS01 CLA ? GO:0005737 ... Q8DJZ6 36334624
    38453 7yq2:k (1.9) BS01 CLA ? GO:0005737 ... Q9F1K9 36334624
    38454 7yq2:k (1.9) BS02 CLA ? GO:0005737 ... Q9F1K9 36334624
    38455 7yq2:x (1.9) BS01 CLA ? GO:0009523 ... Q9F1R6 36334624
    38456 7yq2:y (1.9) BS01 CLA ? GO:0009523 ... Q8DJI1 36334624
    38457 7yq7:A (1.9) BS03 CLA 1.10.3.9 GO:0005506 ... Q8DIV4 36334624
    38458 7yq7:A (1.9) BS04 CLA 1.10.3.9 GO:0005506 ... Q8DIV4 36334624
    38459 7yq7:A (1.9) BS07 CLA 1.10.3.9 GO:0005506 ... Q8DIV4 36334624
    38460 7yq7:A (1.9) BS09 CLA 1.10.3.9 GO:0005506 ... Q8DIV4 36334624
    38461 7yq7:A (1.9) BS10 CLA 1.10.3.9 GO:0005506 ... Q8DIV4 36334624
    38462 7yq7:B (1.9) BS01 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38463 7yq7:B (1.9) BS02 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38464 7yq7:B (1.9) BS03 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38465 7yq7:B (1.9) BS04 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38466 7yq7:B (1.9) BS05 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38467 7yq7:B (1.9) BS06 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38468 7yq7:B (1.9) BS07 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38469 7yq7:B (1.9) BS08 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38470 7yq7:B (1.9) BS09 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38471 7yq7:B (1.9) BS10 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38472 7yq7:B (1.9) BS11 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38473 7yq7:B (1.9) BS12 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38474 7yq7:B (1.9) BS13 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38475 7yq7:B (1.9) BS14 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38476 7yq7:B (1.9) BS15 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38477 7yq7:B (1.9) BS16 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38478 7yq7:C (1.9) BS02 CLA ? GO:0005737 ... Q8DIF8 36334624
    38479 7yq7:C (1.9) BS03 CLA ? GO:0005737 ... Q8DIF8 36334624
    38480 7yq7:C (1.9) BS04 CLA ? GO:0005737 ... Q8DIF8 36334624
    38481 7yq7:C (1.9) BS05 CLA ? GO:0005737 ... Q8DIF8 36334624
    38482 7yq7:C (1.9) BS06 CLA ? GO:0005737 ... Q8DIF8 36334624
    38483 7yq7:C (1.9) BS07 CLA ? GO:0005737 ... Q8DIF8 36334624
    38484 7yq7:C (1.9) BS08 CLA ? GO:0005737 ... Q8DIF8 36334624
    38485 7yq7:C (1.9) BS09 CLA ? GO:0005737 ... Q8DIF8 36334624
    38486 7yq7:C (1.9) BS10 CLA ? GO:0005737 ... Q8DIF8 36334624
    38487 7yq7:C (1.9) BS11 CLA ? GO:0005737 ... Q8DIF8 36334624
    38488 7yq7:C (1.9) BS12 CLA ? GO:0005737 ... Q8DIF8 36334624
    38489 7yq7:C (1.9) BS13 CLA ? GO:0005737 ... Q8DIF8 36334624
    38490 7yq7:C (1.9) BS14 CLA ? GO:0005737 ... Q8DIF8 36334624
    38491 7yq7:D (1.9) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    38492 7yq7:D (1.9) BS06 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    38493 7yq7:D (1.9) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    38494 7yq7:D (1.9) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    38495 7yq7:D (1.9) BS10 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    38496 7yq7:H (1.9) BS01 CLA ? GO:0009523 ... Q8DJ43 36334624
    38497 7yq7:H (1.9) BS02 CLA ? GO:0009523 ... Q8DJ43 36334624
    38498 7yq7:H (1.9) BS03 CLA ? GO:0009523 ... Q8DJ43 36334624
    38499 7yq7:H (1.9) BS04 CLA ? GO:0009523 ... Q8DJ43 36334624
    38500 7yq7:H (1.9) BS05 CLA ? GO:0009523 ... Q8DJ43 36334624
    38501 7yq7:I (1.9) BS01 CLA ? GO:0005737 ... Q8DJZ6 36334624
    38502 7yq7:K (1.9) BS02 CLA ? GO:0005737 ... Q9F1K9 36334624
    38503 7yq7:K (1.9) BS03 CLA ? GO:0005737 ... Q9F1K9 36334624
    38504 7yq7:a (1.9) BS04 CLA 1.10.3.9 GO:0005506 ... Q8DIV4 36334624
    38505 7yq7:a (1.9) BS05 CLA 1.10.3.9 GO:0005506 ... Q8DIV4 36334624
    38506 7yq7:a (1.9) BS06 CLA 1.10.3.9 GO:0005506 ... Q8DIV4 36334624
    38507 7yq7:a (1.9) BS08 CLA 1.10.3.9 GO:0005506 ... Q8DIV4 36334624
    38508 7yq7:a (1.9) BS09 CLA 1.10.3.9 GO:0005506 ... Q8DIV4 36334624
    38509 7yq7:b (1.9) BS01 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38510 7yq7:b (1.9) BS02 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38511 7yq7:b (1.9) BS03 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38512 7yq7:b (1.9) BS04 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38513 7yq7:b (1.9) BS05 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38514 7yq7:b (1.9) BS06 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38515 7yq7:b (1.9) BS07 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38516 7yq7:b (1.9) BS08 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38517 7yq7:b (1.9) BS09 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38518 7yq7:b (1.9) BS10 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38519 7yq7:b (1.9) BS11 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38520 7yq7:b (1.9) BS12 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38521 7yq7:b (1.9) BS13 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38522 7yq7:b (1.9) BS14 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38523 7yq7:b (1.9) BS15 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38524 7yq7:b (1.9) BS16 CLA ? GO:0009521 ... Q8DIQ1 36334624
    38525 7yq7:c (1.9) BS03 CLA ? GO:0005737 ... Q8DIF8 36334624
    38526 7yq7:c (1.9) BS04 CLA ? GO:0005737 ... Q8DIF8 36334624
    38527 7yq7:c (1.9) BS05 CLA ? GO:0005737 ... Q8DIF8 36334624
    38528 7yq7:c (1.9) BS06 CLA ? GO:0005737 ... Q8DIF8 36334624
    38529 7yq7:c (1.9) BS07 CLA ? GO:0005737 ... Q8DIF8 36334624
    38530 7yq7:c (1.9) BS08 CLA ? GO:0005737 ... Q8DIF8 36334624
    38531 7yq7:c (1.9) BS09 CLA ? GO:0005737 ... Q8DIF8 36334624
    38532 7yq7:c (1.9) BS10 CLA ? GO:0005737 ... Q8DIF8 36334624
    38533 7yq7:c (1.9) BS11 CLA ? GO:0005737 ... Q8DIF8 36334624
    38534 7yq7:c (1.9) BS12 CLA ? GO:0005737 ... Q8DIF8 36334624
    38535 7yq7:c (1.9) BS13 CLA ? GO:0005737 ... Q8DIF8 36334624
    38536 7yq7:c (1.9) BS14 CLA ? GO:0005737 ... Q8DIF8 36334624
    38537 7yq7:c (1.9) BS15 CLA ? GO:0005737 ... Q8DIF8 36334624
    38538 7yq7:d (1.9) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    38539 7yq7:d (1.9) BS03 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    38540 7yq7:d (1.9) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    38541 7yq7:d (1.9) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    38542 7yq7:d (1.9) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    38543 7yq7:h (1.9) BS01 CLA ? GO:0009523 ... Q8DJ43 36334624
    38544 7yq7:h (1.9) BS02 CLA ? GO:0009523 ... Q8DJ43 36334624
    38545 7yq7:h (1.9) BS03 CLA ? GO:0009523 ... Q8DJ43 36334624
    38546 7yq7:i (1.9) BS01 CLA ? GO:0005737 ... Q8DJZ6 36334624
    38547 7yq7:i (1.9) BS02 CLA ? GO:0005737 ... Q8DJZ6 36334624
    38548 7yq7:k (1.9) BS01 CLA ? GO:0005737 ... Q9F1K9 36334624
    38549 7yq7:k (1.9) BS02 CLA ? GO:0005737 ... Q9F1K9 36334624
    38550 7yq7:x (1.9) BS01 CLA ? GO:0009523 ... Q9F1R6 36334624
    38551 7yq7:y (1.9) BS01 CLA ? GO:0009523 ... Q8DJI1 36334624
    38552 7yq7:z (1.9) BS01 CLA ? GO:0009523 ... Q8DHJ2 36334624
    38553 7z6q:A (2.5) BS02 CLA ? GO:0009579 ... Q8KAY0 36693097
    38554 7z6q:A (2.5) BS03 CLA ? GO:0009579 ... Q8KAY0 36693097
    38555 7z6q:A (2.5) BS20 CLA ? GO:0009579 ... Q8KAY0 36693097
    38556 7z6q:A (2.5) BS21 CLA ? GO:0009579 ... Q8KAY0 36693097
    38557 7z6q:C (2.5) BS01 CLA ? GO:0005886 ... O07091 36693097
    38558 7z6q:a (2.5) BS01 CLA ? GO:0009579 ... Q8KAY0 36693097
    38559 7z6q:a (2.5) BS02 CLA ? GO:0009579 ... Q8KAY0 36693097
    38560 7z6q:a (2.5) BS05 CLA ? GO:0009579 ... Q8KAY0 36693097
    38561 7z6q:a (2.5) BS06 CLA ? GO:0009579 ... Q8KAY0 36693097
    38562 7z6q:c (2.5) BS01 CLA ? GO:0005886 ... O07091 36693097
    38563 7zq9:1 (2.74) BS01 CLA ? GO:0009416 ... Q05093 36229605
    38564 7zq9:1 (2.74) BS03 CLA ? GO:0009416 ... Q05093 36229605
    38565 7zq9:1 (2.74) BS04 CLA ? GO:0009416 ... Q05093 36229605
    38566 7zq9:1 (2.74) BS05 CLA ? GO:0009416 ... Q05093 36229605
    38567 7zq9:1 (2.74) BS08 CLA ? GO:0009416 ... Q05093 36229605
    38568 7zq9:1 (2.74) BS09 CLA ? GO:0009416 ... Q05093 36229605
    38569 7zq9:1 (2.74) BS10 CLA ? GO:0009416 ... Q05093 36229605
    38570 7zq9:1 (2.74) BS11 CLA ? GO:0009416 ... Q05093 36229605
    38571 7zq9:1 (2.74) BS12 CLA ? GO:0009416 ... Q05093 36229605
    38572 7zq9:1 (2.74) BS13 CLA ? GO:0009416 ... Q05093 36229605
    38573 7zq9:1 (2.74) BS14 CLA ? GO:0009416 ... Q05093 36229605
    38574 7zq9:1 (2.74) BS15 CLA ? GO:0009416 ... Q05093 36229605
    38575 7zq9:3 (2.74) BS01 CLA N/A GO:0009765 ... N/A 36229605
    38576 7zq9:3 (2.74) BS02 CLA N/A GO:0009765 ... N/A 36229605
    38577 7zq9:3 (2.74) BS03 CLA N/A GO:0009765 ... N/A 36229605
    38578 7zq9:3 (2.74) BS04 CLA N/A GO:0009765 ... N/A 36229605
    38579 7zq9:3 (2.74) BS05 CLA N/A GO:0009765 ... N/A 36229605
    38580 7zq9:3 (2.74) BS06 CLA N/A GO:0009765 ... N/A 36229605
    38581 7zq9:3 (2.74) BS07 CLA N/A GO:0009765 ... N/A 36229605
    38582 7zq9:3 (2.74) BS08 CLA N/A GO:0009765 ... N/A 36229605
    38583 7zq9:3 (2.74) BS10 CLA N/A GO:0009765 ... N/A 36229605
    38584 7zq9:3 (2.74) BS11 CLA N/A GO:0009765 ... N/A 36229605
    38585 7zq9:3 (2.74) BS12 CLA N/A GO:0009765 ... N/A 36229605
    38586 7zq9:3 (2.74) BS13 CLA N/A GO:0009765 ... N/A 36229605
    38587 7zq9:3 (2.74) BS14 CLA N/A GO:0009765 ... N/A 36229605
    38588 7zq9:3 (2.74) BS15 CLA N/A GO:0009765 ... N/A 36229605
    38589 7zq9:3 (2.74) BS16 CLA N/A GO:0009765 ... N/A 36229605
    38590 7zq9:4 (2.74) BS03 CLA ? GO:0009416 ... Q75VZ0 36229605
    38591 7zq9:4 (2.74) BS04 CLA ? GO:0009416 ... Q75VZ0 36229605
    38592 7zq9:4 (2.74) BS05 CLA ? GO:0009416 ... Q75VZ0 36229605
    38593 7zq9:4 (2.74) BS09 CLA ? GO:0009416 ... Q75VZ0 36229605
    38594 7zq9:4 (2.74) BS10 CLA ? GO:0009416 ... Q75VZ0 36229605
    38595 7zq9:4 (2.74) BS11 CLA ? GO:0009416 ... Q75VZ0 36229605
    38596 7zq9:4 (2.74) BS12 CLA ? GO:0009416 ... Q75VZ0 36229605
    38597 7zq9:4 (2.74) BS13 CLA ? GO:0009416 ... Q75VZ0 36229605
    38598 7zq9:4 (2.74) BS14 CLA ? GO:0009416 ... Q75VZ0 36229605
    38599 7zq9:4 (2.74) BS15 CLA ? GO:0009416 ... Q75VZ0 36229605
    38600 7zq9:5 (2.74) BS01 CLA ? GO:0009416 ... Q75VY8 36229605

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218