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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    24801 7blx:F (3.15) BS02 CLA ? GO:0009522 ... P12356 N/A
    24802 7blx:F (3.15) BS03 CLA ? GO:0009522 ... P12356 N/A
    24803 7blx:F (3.15) BS04 CLA ? GO:0009522 ... P12356 N/A
    24804 7blx:F (3.15) BS06 CLA ? GO:0009522 ... P12356 N/A
    24805 7blx:F (3.15) BS07 CLA ? GO:0009522 ... P12356 N/A
    24806 7blx:G (3.15) BS01 CLA ? GO:0009522 ... P14224 N/A
    24807 7blx:G (3.15) BS02 CLA ? GO:0009522 ... P14224 N/A
    24808 7blx:G (3.15) BS03 CLA ? GO:0009522 ... P14224 N/A
    24809 7blx:G (3.15) BS04 CLA ? GO:0009522 ... P14224 N/A
    24810 7blx:I (3.15) BS01 CLA ? GO:0009522 ... A8IFG7 N/A
    24811 7blx:I (3.15) BS02 CLA ? GO:0009522 ... A8IFG7 N/A
    24812 7blx:J (3.15) BS01 CLA ? GO:0009507 ... P59777 N/A
    24813 7blx:J (3.15) BS02 CLA ? GO:0009507 ... P59777 N/A
    24814 7blx:J (3.15) BS03 CLA ? GO:0009507 ... P59777 N/A
    24815 7blx:J (3.15) BS04 CLA ? GO:0009507 ... P59777 N/A
    24816 7blx:K (3.15) BS01 CLA ? GO:0009522 ... P14225 N/A
    24817 7blx:K (3.15) BS02 CLA ? GO:0009522 ... P14225 N/A
    24818 7blx:K (3.15) BS03 CLA ? GO:0009522 ... P14225 N/A
    24819 7blx:K (3.15) BS04 CLA ? GO:0009522 ... P14225 N/A
    24820 7blx:K (3.15) BS05 CLA ? GO:0009522 ... P14225 N/A
    24821 7blx:K (3.15) BS06 CLA ? GO:0009522 ... P14225 N/A
    24822 7blx:K (3.15) BS07 CLA ? GO:0009522 ... P14225 N/A
    24823 7blx:L (3.15) BS01 CLA ? GO:0009522 ... A8IL32 N/A
    24824 7blx:L (3.15) BS02 CLA ? GO:0009522 ... A8IL32 N/A
    24825 7blx:L (3.15) BS03 CLA ? GO:0009522 ... A8IL32 N/A
    24826 7blx:L (3.15) BS04 CLA ? GO:0009522 ... A8IL32 N/A
    24827 7blx:L (3.15) BS05 CLA ? GO:0009522 ... A8IL32 N/A
    24828 7blx:L (3.15) BS06 CLA ? GO:0009522 ... A8IL32 N/A
    24829 7blx:Z (3.15) BS01 CLA ? GO:0009765 ... Q05093 N/A
    24830 7blx:Z (3.15) BS02 CLA ? GO:0009765 ... Q05093 N/A
    24831 7blx:Z (3.15) BS03 CLA ? GO:0009765 ... Q05093 N/A
    24832 7blx:Z (3.15) BS04 CLA ? GO:0009765 ... Q05093 N/A
    24833 7blx:Z (3.15) BS05 CLA ? GO:0009765 ... Q05093 N/A
    24834 7blx:Z (3.15) BS06 CLA ? GO:0009765 ... Q05093 N/A
    24835 7blx:Z (3.15) BS07 CLA ? GO:0009765 ... Q05093 N/A
    24836 7blx:Z (3.15) BS09 CLA ? GO:0009765 ... Q05093 N/A
    24837 7blx:Z (3.15) BS10 CLA ? GO:0009765 ... Q05093 N/A
    24838 7blx:Z (3.15) BS12 CLA ? GO:0009765 ... Q05093 N/A
    24839 7blz:1 (3.1) BS01 CLA ? GO:0009765 ... M1VKK5 N/A
    24840 7blz:1 (3.1) BS02 CLA ? GO:0009765 ... M1VKK5 N/A
    24841 7blz:1 (3.1) BS03 CLA ? GO:0009765 ... M1VKK5 N/A
    24842 7blz:1 (3.1) BS04 CLA ? GO:0009765 ... M1VKK5 N/A
    24843 7blz:1 (3.1) BS05 CLA ? GO:0009765 ... M1VKK5 N/A
    24844 7blz:1 (3.1) BS06 CLA ? GO:0009765 ... M1VKK5 N/A
    24845 7blz:1 (3.1) BS07 CLA ? GO:0009765 ... M1VKK5 N/A
    24846 7blz:1 (3.1) BS08 CLA ? GO:0009765 ... M1VKK5 N/A
    24847 7blz:1 (3.1) BS09 CLA ? GO:0009765 ... M1VKK5 N/A
    24848 7blz:1 (3.1) BS10 CLA ? GO:0009765 ... M1VKK5 N/A
    24849 7blz:1 (3.1) BS11 CLA ? GO:0009765 ... M1VKK5 N/A
    24850 7blz:1 (3.1) BS18 CLA ? GO:0009765 ... M1VKK5 N/A
    24851 7blz:2 (3.1) BS01 CLA ? GO:0009765 ... M1UU36 N/A
    24852 7blz:2 (3.1) BS04 CLA ? GO:0009765 ... M1UU36 N/A
    24853 7blz:2 (3.1) BS05 CLA ? GO:0009765 ... M1UU36 N/A
    24854 7blz:2 (3.1) BS06 CLA ? GO:0009765 ... M1UU36 N/A
    24855 7blz:2 (3.1) BS07 CLA ? GO:0009765 ... M1UU36 N/A
    24856 7blz:2 (3.1) BS08 CLA ? GO:0009765 ... M1UU36 N/A
    24857 7blz:2 (3.1) BS09 CLA ? GO:0009765 ... M1UU36 N/A
    24858 7blz:2 (3.1) BS10 CLA ? GO:0009765 ... M1UU36 N/A
    24859 7blz:2 (3.1) BS11 CLA ? GO:0009765 ... M1UU36 N/A
    24860 7blz:2 (3.1) BS12 CLA ? GO:0009765 ... M1UU36 N/A
    24861 7blz:2 (3.1) BS13 CLA ? GO:0009765 ... M1UU36 N/A
    24862 7blz:2 (3.1) BS14 CLA ? GO:0009765 ... M1UU36 N/A
    24863 7blz:2 (3.1) BS15 CLA ? GO:0009765 ... M1UU36 N/A
    24864 7blz:3 (3.1) BS01 CLA N/A GO:0009765 ... N/A N/A
    24865 7blz:3 (3.1) BS03 CLA N/A GO:0009765 ... N/A N/A
    24866 7blz:3 (3.1) BS04 CLA N/A GO:0009765 ... N/A N/A
    24867 7blz:3 (3.1) BS05 CLA N/A GO:0009765 ... N/A N/A
    24868 7blz:3 (3.1) BS06 CLA N/A GO:0009765 ... N/A N/A
    24869 7blz:3 (3.1) BS07 CLA N/A GO:0009765 ... N/A N/A
    24870 7blz:3 (3.1) BS08 CLA N/A GO:0009765 ... N/A N/A
    24871 7blz:3 (3.1) BS09 CLA N/A GO:0009765 ... N/A N/A
    24872 7blz:3 (3.1) BS10 CLA N/A GO:0009765 ... N/A N/A
    24873 7blz:3 (3.1) BS11 CLA N/A GO:0009765 ... N/A N/A
    24874 7blz:3 (3.1) BS12 CLA N/A GO:0009765 ... N/A N/A
    24875 7blz:3 (3.1) BS13 CLA N/A GO:0009765 ... N/A N/A
    24876 7blz:3 (3.1) BS14 CLA N/A GO:0009765 ... N/A N/A
    24877 7blz:A (3.1) BS01 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24878 7blz:A (3.1) BS03 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24879 7blz:A (3.1) BS04 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24880 7blz:A (3.1) BS05 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24881 7blz:A (3.1) BS06 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24882 7blz:A (3.1) BS07 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24883 7blz:A (3.1) BS08 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24884 7blz:A (3.1) BS09 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24885 7blz:A (3.1) BS10 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24886 7blz:A (3.1) BS11 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24887 7blz:A (3.1) BS12 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24888 7blz:A (3.1) BS13 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24889 7blz:A (3.1) BS14 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24890 7blz:A (3.1) BS15 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24891 7blz:A (3.1) BS16 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24892 7blz:A (3.1) BS17 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24893 7blz:A (3.1) BS18 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24894 7blz:A (3.1) BS19 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24895 7blz:A (3.1) BS20 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24896 7blz:A (3.1) BS21 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24897 7blz:A (3.1) BS22 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24898 7blz:A (3.1) BS23 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24899 7blz:A (3.1) BS24 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24900 7blz:A (3.1) BS25 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24901 7blz:A (3.1) BS26 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24902 7blz:A (3.1) BS27 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24903 7blz:A (3.1) BS28 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24904 7blz:A (3.1) BS29 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24905 7blz:A (3.1) BS30 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24906 7blz:A (3.1) BS31 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24907 7blz:A (3.1) BS32 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24908 7blz:A (3.1) BS33 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24909 7blz:A (3.1) BS34 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24910 7blz:A (3.1) BS35 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24911 7blz:A (3.1) BS36 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24912 7blz:A (3.1) BS37 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24913 7blz:A (3.1) BS38 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24914 7blz:A (3.1) BS39 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24915 7blz:A (3.1) BS40 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24916 7blz:A (3.1) BS46 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24917 7blz:A (3.1) BS47 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24918 7blz:A (3.1) BS48 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24919 7blz:A (3.1) BS49 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24920 7blz:A (3.1) BS50 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24921 7blz:A (3.1) BS51 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24922 7blz:A (3.1) BS52 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24923 7blz:A (3.1) BS53 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24924 7blz:A (3.1) BS54 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24925 7blz:A (3.1) BS56 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24926 7blz:A (3.1) BS57 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24927 7blz:A (3.1) BS58 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    24928 7blz:B (3.1) BS03 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24929 7blz:B (3.1) BS04 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24930 7blz:B (3.1) BS06 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24931 7blz:B (3.1) BS07 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24932 7blz:B (3.1) BS08 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24933 7blz:B (3.1) BS09 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24934 7blz:B (3.1) BS10 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24935 7blz:B (3.1) BS11 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24936 7blz:B (3.1) BS12 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24937 7blz:B (3.1) BS13 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24938 7blz:B (3.1) BS14 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24939 7blz:B (3.1) BS15 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24940 7blz:B (3.1) BS16 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24941 7blz:B (3.1) BS17 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24942 7blz:B (3.1) BS18 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24943 7blz:B (3.1) BS19 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24944 7blz:B (3.1) BS20 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24945 7blz:B (3.1) BS21 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24946 7blz:B (3.1) BS22 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24947 7blz:B (3.1) BS23 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24948 7blz:B (3.1) BS24 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24949 7blz:B (3.1) BS25 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24950 7blz:B (3.1) BS26 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24951 7blz:B (3.1) BS27 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24952 7blz:B (3.1) BS28 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24953 7blz:B (3.1) BS29 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24954 7blz:B (3.1) BS30 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24955 7blz:B (3.1) BS31 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24956 7blz:B (3.1) BS32 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24957 7blz:B (3.1) BS33 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24958 7blz:B (3.1) BS34 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24959 7blz:B (3.1) BS35 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24960 7blz:B (3.1) BS36 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24961 7blz:B (3.1) BS37 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24962 7blz:B (3.1) BS38 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24963 7blz:B (3.1) BS39 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24964 7blz:B (3.1) BS40 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24965 7blz:B (3.1) BS41 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24966 7blz:B (3.1) BS42 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24967 7blz:B (3.1) BS43 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24968 7blz:B (3.1) BS44 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24969 7blz:B (3.1) BS45 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24970 7blz:B (3.1) BS46 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24971 7blz:B (3.1) BS50 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24972 7blz:B (3.1) BS51 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24973 7blz:B (3.1) BS52 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24974 7blz:B (3.1) BS53 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24975 7blz:B (3.1) BS54 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24976 7blz:F (3.1) BS01 CLA ? GO:0009507 ... Q85FS9 N/A
    24977 7blz:F (3.1) BS02 CLA ? GO:0009507 ... Q85FS9 N/A
    24978 7blz:F (3.1) BS03 CLA ? GO:0009507 ... Q85FS9 N/A
    24979 7blz:F (3.1) BS04 CLA ? GO:0009507 ... Q85FS9 N/A
    24980 7blz:F (3.1) BS05 CLA ? GO:0009507 ... Q85FS9 N/A
    24981 7blz:F (3.1) BS06 CLA ? GO:0009507 ... Q85FS9 N/A
    24982 7blz:F (3.1) BS07 CLA ? GO:0009507 ... Q85FS9 N/A
    24983 7blz:I (3.1) BS02 CLA ? GO:0009507 ... Q85FQ6 N/A
    24984 7blz:I (3.1) BS03 CLA ? GO:0009507 ... Q85FQ6 N/A
    24985 7blz:I (3.1) BS04 CLA ? GO:0009507 ... Q85FQ6 N/A
    24986 7blz:J (3.1) BS01 CLA ? GO:0009507 ... Q85FS8 N/A
    24987 7blz:J (3.1) BS02 CLA ? GO:0009507 ... Q85FS8 N/A
    24988 7blz:J (3.1) BS03 CLA ? GO:0009507 ... Q85FS8 N/A
    24989 7blz:J (3.1) BS04 CLA ? GO:0009507 ... Q85FS8 N/A
    24990 7blz:J (3.1) BS05 CLA ? GO:0009507 ... Q85FS8 N/A
    24991 7blz:J (3.1) BS06 CLA ? GO:0009507 ... Q85FS8 N/A
    24992 7blz:K (3.1) BS01 CLA ? GO:0009507 ... Q85G51 N/A
    24993 7blz:K (3.1) BS02 CLA ? GO:0009507 ... Q85G51 N/A
    24994 7blz:K (3.1) BS03 CLA ? GO:0009507 ... Q85G51 N/A
    24995 7blz:K (3.1) BS04 CLA ? GO:0009507 ... Q85G51 N/A
    24996 7blz:L (3.1) BS01 CLA ? GO:0009507 ... Q85FP8 N/A
    24997 7blz:L (3.1) BS02 CLA ? GO:0009507 ... Q85FP8 N/A
    24998 7blz:L (3.1) BS03 CLA ? GO:0009507 ... Q85FP8 N/A
    24999 7blz:L (3.1) BS04 CLA ? GO:0009507 ... Q85FP8 N/A
    25000 7blz:L (3.1) BS05 CLA ? GO:0009507 ... Q85FP8 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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