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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    22601 6wj6:C (2.58) BS11 CLA ? GO:0005737 ... P09193 N/A
    22602 6wj6:C (2.58) BS12 CLA ? GO:0005737 ... P09193 N/A
    22603 6wj6:C (2.58) BS13 CLA ? GO:0005737 ... P09193 N/A
    22604 6wj6:D (2.58) BS03 CLA 1.10.3.9 GO:0005506 ... P09192 N/A
    22605 6wj6:D (2.58) BS05 CLA 1.10.3.9 GO:0005506 ... P09192 N/A
    22606 6wj6:D (2.58) BS06 CLA 1.10.3.9 GO:0005506 ... P09192 N/A
    22607 6wj6:D (2.58) BS09 CLA 1.10.3.9 GO:0005506 ... P09192 N/A
    22608 6wj6:D (2.58) BS10 CLA 1.10.3.9 GO:0005506 ... P09192 N/A
    22609 6wj6:H (2.58) BS01 CLA ? GO:0009523 ... P14835 N/A
    22610 6wj6:H (2.58) BS02 CLA ? GO:0009523 ... P14835 N/A
    22611 6wj6:H (2.58) BS03 CLA ? GO:0009523 ... P14835 N/A
    22612 6wj6:H (2.58) BS04 CLA ? GO:0009523 ... P14835 N/A
    22613 6wj6:I (2.58) BS01 CLA ? GO:0005737 ... Q54697 N/A
    22614 6wj6:K (2.58) BS01 CLA ? GO:0005737 ... P15819 N/A
    22615 6wj6:K (2.58) BS02 CLA ? GO:0005737 ... P15819 N/A
    22616 6wj6:X (2.58) BS01 CLA ? GO:0009523 ... P72575 N/A
    22617 6yac:1 (2.5) BS01 CLA N/A GO:0009765 ... N/A 33020607
    22618 6yac:1 (2.5) BS02 CLA N/A GO:0009765 ... N/A 33020607
    22619 6yac:1 (2.5) BS03 CLA N/A GO:0009765 ... N/A 33020607
    22620 6yac:1 (2.5) BS04 CLA N/A GO:0009765 ... N/A 33020607
    22621 6yac:1 (2.5) BS05 CLA N/A GO:0009765 ... N/A 33020607
    22622 6yac:1 (2.5) BS06 CLA N/A GO:0009765 ... N/A 33020607
    22623 6yac:1 (2.5) BS07 CLA N/A GO:0009765 ... N/A 33020607
    22624 6yac:1 (2.5) BS08 CLA N/A GO:0009765 ... N/A 33020607
    22625 6yac:1 (2.5) BS09 CLA N/A GO:0009765 ... N/A 33020607
    22626 6yac:1 (2.5) BS11 CLA N/A GO:0009765 ... N/A 33020607
    22627 6yac:1 (2.5) BS13 CLA N/A GO:0009765 ... N/A 33020607
    22628 6yac:1 (2.5) BS14 CLA N/A GO:0009765 ... N/A 33020607
    22629 6yac:2 (2.5) BS01 CLA ? GO:0009765 ... Q41038 33020607
    22630 6yac:2 (2.5) BS02 CLA ? GO:0009765 ... Q41038 33020607
    22631 6yac:2 (2.5) BS03 CLA ? GO:0009765 ... Q41038 33020607
    22632 6yac:2 (2.5) BS04 CLA ? GO:0009765 ... Q41038 33020607
    22633 6yac:2 (2.5) BS05 CLA ? GO:0009765 ... Q41038 33020607
    22634 6yac:2 (2.5) BS06 CLA ? GO:0009765 ... Q41038 33020607
    22635 6yac:2 (2.5) BS10 CLA ? GO:0009765 ... Q41038 33020607
    22636 6yac:2 (2.5) BS13 CLA ? GO:0009765 ... Q41038 33020607
    22637 6yac:2 (2.5) BS14 CLA ? GO:0009765 ... Q41038 33020607
    22638 6yac:3 (2.5) BS01 CLA ? GO:0009765 ... Q32904 33020607
    22639 6yac:3 (2.5) BS02 CLA ? GO:0009765 ... Q32904 33020607
    22640 6yac:3 (2.5) BS04 CLA ? GO:0009765 ... Q32904 33020607
    22641 6yac:3 (2.5) BS05 CLA ? GO:0009765 ... Q32904 33020607
    22642 6yac:3 (2.5) BS06 CLA ? GO:0009765 ... Q32904 33020607
    22643 6yac:3 (2.5) BS08 CLA ? GO:0009765 ... Q32904 33020607
    22644 6yac:3 (2.5) BS10 CLA ? GO:0009765 ... Q32904 33020607
    22645 6yac:3 (2.5) BS11 CLA ? GO:0009765 ... Q32904 33020607
    22646 6yac:3 (2.5) BS13 CLA ? GO:0009765 ... Q32904 33020607
    22647 6yac:3 (2.5) BS14 CLA ? GO:0009765 ... Q32904 33020607
    22648 6yac:3 (2.5) BS15 CLA ? GO:0009765 ... Q32904 33020607
    22649 6yac:3 (2.5) BS16 CLA ? GO:0009765 ... Q32904 33020607
    22650 6yac:4 (2.5) BS02 CLA ? GO:0009765 ... Q9SQL2 33020607
    22651 6yac:4 (2.5) BS03 CLA ? GO:0009765 ... Q9SQL2 33020607
    22652 6yac:4 (2.5) BS04 CLA ? GO:0009765 ... Q9SQL2 33020607
    22653 6yac:4 (2.5) BS05 CLA ? GO:0009765 ... Q9SQL2 33020607
    22654 6yac:4 (2.5) BS06 CLA ? GO:0009765 ... Q9SQL2 33020607
    22655 6yac:4 (2.5) BS07 CLA ? GO:0009765 ... Q9SQL2 33020607
    22656 6yac:4 (2.5) BS08 CLA ? GO:0009765 ... Q9SQL2 33020607
    22657 6yac:4 (2.5) BS11 CLA ? GO:0009765 ... Q9SQL2 33020607
    22658 6yac:4 (2.5) BS14 CLA ? GO:0009765 ... Q9SQL2 33020607
    22659 6yac:A (2.5) BS02 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22660 6yac:A (2.5) BS03 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22661 6yac:A (2.5) BS04 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22662 6yac:A (2.5) BS05 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22663 6yac:A (2.5) BS06 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22664 6yac:A (2.5) BS07 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22665 6yac:A (2.5) BS08 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22666 6yac:A (2.5) BS09 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22667 6yac:A (2.5) BS10 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22668 6yac:A (2.5) BS11 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22669 6yac:A (2.5) BS12 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22670 6yac:A (2.5) BS13 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22671 6yac:A (2.5) BS14 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22672 6yac:A (2.5) BS15 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22673 6yac:A (2.5) BS16 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22674 6yac:A (2.5) BS17 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22675 6yac:A (2.5) BS18 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22676 6yac:A (2.5) BS19 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22677 6yac:A (2.5) BS20 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22678 6yac:A (2.5) BS21 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22679 6yac:A (2.5) BS22 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22680 6yac:A (2.5) BS23 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22681 6yac:A (2.5) BS24 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22682 6yac:A (2.5) BS25 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22683 6yac:A (2.5) BS26 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22684 6yac:A (2.5) BS27 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22685 6yac:A (2.5) BS28 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22686 6yac:A (2.5) BS29 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22687 6yac:A (2.5) BS30 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22688 6yac:A (2.5) BS31 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22689 6yac:A (2.5) BS32 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22690 6yac:A (2.5) BS33 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22691 6yac:A (2.5) BS34 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22692 6yac:A (2.5) BS35 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22693 6yac:A (2.5) BS36 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22694 6yac:A (2.5) BS37 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22695 6yac:A (2.5) BS38 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22696 6yac:A (2.5) BS39 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22697 6yac:A (2.5) BS40 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22698 6yac:A (2.5) BS41 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22699 6yac:A (2.5) BS42 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22700 6yac:A (2.5) BS45 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22701 6yac:A (2.5) BS46 CLA 1.97.1.12 GO:0000287 ... A0A0F6NFW5 33020607
    22702 6yac:B (2.5) BS01 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22703 6yac:B (2.5) BS02 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22704 6yac:B (2.5) BS03 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22705 6yac:B (2.5) BS05 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22706 6yac:B (2.5) BS06 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22707 6yac:B (2.5) BS07 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22708 6yac:B (2.5) BS08 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22709 6yac:B (2.5) BS09 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22710 6yac:B (2.5) BS10 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22711 6yac:B (2.5) BS11 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22712 6yac:B (2.5) BS12 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22713 6yac:B (2.5) BS13 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22714 6yac:B (2.5) BS14 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22715 6yac:B (2.5) BS15 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22716 6yac:B (2.5) BS16 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22717 6yac:B (2.5) BS17 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22718 6yac:B (2.5) BS18 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22719 6yac:B (2.5) BS19 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22720 6yac:B (2.5) BS20 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22721 6yac:B (2.5) BS21 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22722 6yac:B (2.5) BS22 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22723 6yac:B (2.5) BS23 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22724 6yac:B (2.5) BS24 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22725 6yac:B (2.5) BS25 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22726 6yac:B (2.5) BS26 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22727 6yac:B (2.5) BS27 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22728 6yac:B (2.5) BS28 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22729 6yac:B (2.5) BS29 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22730 6yac:B (2.5) BS30 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22731 6yac:B (2.5) BS31 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22732 6yac:B (2.5) BS32 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22733 6yac:B (2.5) BS33 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22734 6yac:B (2.5) BS34 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22735 6yac:B (2.5) BS35 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22736 6yac:B (2.5) BS36 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22737 6yac:B (2.5) BS37 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22738 6yac:B (2.5) BS38 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22739 6yac:B (2.5) BS39 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22740 6yac:B (2.5) BS40 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22741 6yac:B (2.5) BS41 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22742 6yac:B (2.5) BS42 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22743 6yac:B (2.5) BS43 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22744 6yac:B (2.5) BS46 CLA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 33020607
    22745 6yac:F (2.5) BS01 CLA ? GO:0009507 ... A0A0M3KL12 33020607
    22746 6yac:F (2.5) BS02 CLA ? GO:0009507 ... A0A0M3KL12 33020607
    22747 6yac:F (2.5) BS03 CLA ? GO:0009507 ... A0A0M3KL12 33020607
    22748 6yac:F (2.5) BS04 CLA ? GO:0009507 ... A0A0M3KL12 33020607
    22749 6yac:F (2.5) BS05 CLA ? GO:0009507 ... A0A0M3KL12 33020607
    22750 6yac:F (2.5) BS06 CLA ? GO:0009507 ... A0A0M3KL12 33020607
    22751 6yac:G (2.5) BS01 CLA N/A GO:0009522 ... N/A 33020607
    22752 6yac:G (2.5) BS02 CLA N/A GO:0009522 ... N/A 33020607
    22753 6yac:G (2.5) BS03 CLA N/A GO:0009522 ... N/A 33020607
    22754 6yac:G (2.5) BS04 CLA N/A GO:0009522 ... N/A 33020607
    22755 6yac:H (2.5) BS01 CLA ? GO:0009507 ... A0A0M3KL10 33020607
    22756 6yac:H (2.5) BS02 CLA ? GO:0009507 ... A0A0M3KL10 33020607
    22757 6yac:H (2.5) BS03 CLA ? GO:0009507 ... A0A0M3KL10 33020607
    22758 6yac:I (2.5) BS01 CLA ? GO:0009522 ... P17227 33020607
    22759 6yac:I (2.5) BS02 CLA ? GO:0009522 ... P17227 33020607
    22760 6yac:J (2.5) BS01 CLA ? GO:0009507 ... D5MAL3 33020607
    22761 6yac:J (2.5) BS02 CLA ? GO:0009507 ... D5MAL3 33020607
    22762 6yac:J (2.5) BS03 CLA ? GO:0009507 ... D5MAL3 33020607
    22763 6yac:K (2.5) BS01 CLA ? GO:0009507 ... E1C9L3 33020607
    22764 6yac:K (2.5) BS02 CLA ? GO:0009507 ... E1C9L3 33020607
    22765 6yac:K (2.5) BS03 CLA ? GO:0009507 ... E1C9L3 33020607
    22766 6yac:K (2.5) BS04 CLA ? GO:0009507 ... E1C9L3 33020607
    22767 6yac:K (2.5) BS05 CLA ? GO:0009507 ... E1C9L3 33020607
    22768 6yac:L (2.5) BS01 CLA ? GO:0009522 ... E1C9L1 33020607
    22769 6yac:L (2.5) BS02 CLA ? GO:0009522 ... E1C9L1 33020607
    22770 6yac:L (2.5) BS03 CLA ? GO:0009522 ... E1C9L1 33020607
    22771 6yac:L (2.5) BS04 CLA ? GO:0009522 ... E1C9L1 33020607
    22772 6yac:L (2.5) BS05 CLA ? GO:0009522 ... E1C9L1 33020607
    22773 6yac:L (2.5) BS06 CLA ? GO:0009522 ... E1C9L1 33020607
    22774 6yez:1 (2.7) BS01 CLA N/A GO:0009765 ... N/A 33020607
    22775 6yez:1 (2.7) BS02 CLA N/A GO:0009765 ... N/A 33020607
    22776 6yez:1 (2.7) BS03 CLA N/A GO:0009765 ... N/A 33020607
    22777 6yez:1 (2.7) BS04 CLA N/A GO:0009765 ... N/A 33020607
    22778 6yez:1 (2.7) BS05 CLA N/A GO:0009765 ... N/A 33020607
    22779 6yez:1 (2.7) BS06 CLA N/A GO:0009765 ... N/A 33020607
    22780 6yez:1 (2.7) BS07 CLA N/A GO:0009765 ... N/A 33020607
    22781 6yez:1 (2.7) BS08 CLA N/A GO:0009765 ... N/A 33020607
    22782 6yez:1 (2.7) BS09 CLA N/A GO:0009765 ... N/A 33020607
    22783 6yez:1 (2.7) BS10 CLA N/A GO:0009765 ... N/A 33020607
    22784 6yez:1 (2.7) BS12 CLA N/A GO:0009765 ... N/A 33020607
    22785 6yez:1 (2.7) BS14 CLA N/A GO:0009765 ... N/A 33020607
    22786 6yez:1 (2.7) BS15 CLA N/A GO:0009765 ... N/A 33020607
    22787 6yez:2 (2.7) BS01 CLA ? GO:0009765 ... Q41038 33020607
    22788 6yez:2 (2.7) BS02 CLA ? GO:0009765 ... Q41038 33020607
    22789 6yez:2 (2.7) BS03 CLA ? GO:0009765 ... Q41038 33020607
    22790 6yez:2 (2.7) BS04 CLA ? GO:0009765 ... Q41038 33020607
    22791 6yez:2 (2.7) BS05 CLA ? GO:0009765 ... Q41038 33020607
    22792 6yez:2 (2.7) BS06 CLA ? GO:0009765 ... Q41038 33020607
    22793 6yez:2 (2.7) BS07 CLA ? GO:0009765 ... Q41038 33020607
    22794 6yez:2 (2.7) BS08 CLA ? GO:0009765 ... Q41038 33020607
    22795 6yez:2 (2.7) BS11 CLA ? GO:0009765 ... Q41038 33020607
    22796 6yez:2 (2.7) BS15 CLA ? GO:0009765 ... Q41038 33020607
    22797 6yez:3 (2.7) BS01 CLA ? GO:0009765 ... Q32904 33020607
    22798 6yez:3 (2.7) BS04 CLA ? GO:0009765 ... Q32904 33020607
    22799 6yez:3 (2.7) BS05 CLA ? GO:0009765 ... Q32904 33020607
    22800 6yez:3 (2.7) BS06 CLA ? GO:0009765 ... Q32904 33020607

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218