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BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    20601 6trc:A (2.98) BS39 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20602 6trc:A (2.98) BS40 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20603 6trc:A (2.98) BS41 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20604 6trc:A (2.98) BS42 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20605 6trc:A (2.98) BS43 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20606 6trc:A (2.98) BS46 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20607 6trc:A (2.98) BS47 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20608 6trc:A (2.98) BS48 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20609 6trc:A (2.98) BS49 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20610 6trc:A (2.98) BS50 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20611 6trc:B (2.98) BS02 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20612 6trc:B (2.98) BS03 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20613 6trc:B (2.98) BS04 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20614 6trc:B (2.98) BS05 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20615 6trc:B (2.98) BS06 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20616 6trc:B (2.98) BS09 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20617 6trc:B (2.98) BS10 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20618 6trc:B (2.98) BS11 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20619 6trc:B (2.98) BS12 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20620 6trc:B (2.98) BS13 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20621 6trc:B (2.98) BS14 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20622 6trc:B (2.98) BS15 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20623 6trc:B (2.98) BS16 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20624 6trc:B (2.98) BS17 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20625 6trc:B (2.98) BS18 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20626 6trc:B (2.98) BS19 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20627 6trc:B (2.98) BS20 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20628 6trc:B (2.98) BS21 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20629 6trc:B (2.98) BS22 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20630 6trc:B (2.98) BS23 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20631 6trc:B (2.98) BS24 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20632 6trc:B (2.98) BS25 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20633 6trc:B (2.98) BS26 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20634 6trc:B (2.98) BS27 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20635 6trc:B (2.98) BS28 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20636 6trc:B (2.98) BS29 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20637 6trc:B (2.98) BS30 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20638 6trc:B (2.98) BS31 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20639 6trc:B (2.98) BS32 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20640 6trc:B (2.98) BS33 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20641 6trc:B (2.98) BS34 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20642 6trc:B (2.98) BS35 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20643 6trc:B (2.98) BS36 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20644 6trc:B (2.98) BS37 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20645 6trc:B (2.98) BS38 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20646 6trc:B (2.98) BS39 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20647 6trc:B (2.98) BS40 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20648 6trc:B (2.98) BS41 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20649 6trc:B (2.98) BS42 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20650 6trc:B (2.98) BS43 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20651 6trc:B (2.98) BS44 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20652 6trc:B (2.98) BS45 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20653 6trc:B (2.98) BS46 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20654 6trc:B (2.98) BS47 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20655 6trc:B (2.98) BS48 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20656 6trc:F (2.98) BS02 CLA ? GO:0009522 ... P0A401 N/A
    20657 6trc:F (2.98) BS03 CLA ? GO:0009522 ... P0A401 N/A
    20658 6trc:F (2.98) BS04 CLA ? GO:0009522 ... P0A401 N/A
    20659 6trc:F (2.98) BS05 CLA ? GO:0009522 ... P0A401 N/A
    20660 6trc:F (2.98) BS06 CLA ? GO:0009522 ... P0A401 N/A
    20661 6trc:F (2.98) BS07 CLA ? GO:0009522 ... P0A401 N/A
    20662 6trc:I (2.98) BS01 CLA ? GO:0009522 ... P0A427 N/A
    20663 6trc:I (2.98) BS02 CLA ? GO:0009522 ... P0A427 N/A
    20664 6trc:I (2.98) BS03 CLA ? GO:0009522 ... P0A427 N/A
    20665 6trc:I (2.98) BS04 CLA ? GO:0009522 ... P0A427 N/A
    20666 6trc:J (2.98) BS01 CLA ? GO:0009522 ... P0A429 N/A
    20667 6trc:J (2.98) BS02 CLA ? GO:0009522 ... P0A429 N/A
    20668 6trc:J (2.98) BS03 CLA ? GO:0009522 ... P0A429 N/A
    20669 6trc:J (2.98) BS04 CLA ? GO:0009522 ... P0A429 N/A
    20670 6trc:K (2.98) BS01 CLA ? GO:0009522 ... P0A425 N/A
    20671 6trc:K (2.98) BS02 CLA ? GO:0009522 ... P0A425 N/A
    20672 6trc:K (2.98) BS03 CLA ? GO:0009522 ... P0A425 N/A
    20673 6trc:L (2.98) BS01 CLA ? GO:0009522 ... Q8DGB4 N/A
    20674 6trc:L (2.98) BS02 CLA ? GO:0009522 ... Q8DGB4 N/A
    20675 6trc:L (2.98) BS03 CLA ? GO:0009522 ... Q8DGB4 N/A
    20676 6trc:L (2.98) BS05 CLA ? GO:0009522 ... Q8DGB4 N/A
    20677 6trc:L (2.98) BS06 CLA ? GO:0009522 ... Q8DGB4 N/A
    20678 6trc:L (2.98) BS07 CLA ? GO:0009522 ... Q8DGB4 N/A
    20679 6trc:L (2.98) BS08 CLA ? GO:0009522 ... Q8DGB4 N/A
    20680 6trc:L (2.98) BS09 CLA ? GO:0009522 ... Q8DGB4 N/A
    20681 6trc:M (2.98) BS01 CLA ? GO:0009522 ... P0A403 N/A
    20682 6trc:a (2.98) BS02 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20683 6trc:a (2.98) BS03 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20684 6trc:a (2.98) BS04 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20685 6trc:a (2.98) BS05 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20686 6trc:a (2.98) BS06 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20687 6trc:a (2.98) BS07 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20688 6trc:a (2.98) BS08 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20689 6trc:a (2.98) BS09 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20690 6trc:a (2.98) BS10 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20691 6trc:a (2.98) BS11 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20692 6trc:a (2.98) BS12 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20693 6trc:a (2.98) BS13 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20694 6trc:a (2.98) BS14 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20695 6trc:a (2.98) BS15 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20696 6trc:a (2.98) BS16 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20697 6trc:a (2.98) BS17 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20698 6trc:a (2.98) BS18 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20699 6trc:a (2.98) BS19 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20700 6trc:a (2.98) BS20 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20701 6trc:a (2.98) BS21 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20702 6trc:a (2.98) BS22 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20703 6trc:a (2.98) BS23 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20704 6trc:a (2.98) BS24 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20705 6trc:a (2.98) BS25 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20706 6trc:a (2.98) BS26 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20707 6trc:a (2.98) BS27 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20708 6trc:a (2.98) BS28 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20709 6trc:a (2.98) BS29 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20710 6trc:a (2.98) BS30 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20711 6trc:a (2.98) BS31 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20712 6trc:a (2.98) BS32 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20713 6trc:a (2.98) BS33 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20714 6trc:a (2.98) BS34 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20715 6trc:a (2.98) BS35 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20716 6trc:a (2.98) BS36 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20717 6trc:a (2.98) BS37 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20718 6trc:a (2.98) BS38 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20719 6trc:a (2.98) BS39 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20720 6trc:a (2.98) BS40 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20721 6trc:a (2.98) BS41 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20722 6trc:a (2.98) BS42 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20723 6trc:a (2.98) BS45 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20724 6trc:a (2.98) BS46 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20725 6trc:a (2.98) BS47 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20726 6trc:a (2.98) BS48 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20727 6trc:a (2.98) BS49 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20728 6trc:a (2.98) BS50 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20729 6trc:b (2.98) BS02 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20730 6trc:b (2.98) BS03 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20731 6trc:b (2.98) BS04 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20732 6trc:b (2.98) BS05 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20733 6trc:b (2.98) BS06 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20734 6trc:b (2.98) BS09 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20735 6trc:b (2.98) BS10 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20736 6trc:b (2.98) BS11 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20737 6trc:b (2.98) BS12 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20738 6trc:b (2.98) BS13 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20739 6trc:b (2.98) BS14 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20740 6trc:b (2.98) BS15 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20741 6trc:b (2.98) BS16 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20742 6trc:b (2.98) BS17 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20743 6trc:b (2.98) BS18 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20744 6trc:b (2.98) BS19 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20745 6trc:b (2.98) BS20 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20746 6trc:b (2.98) BS21 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20747 6trc:b (2.98) BS22 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20748 6trc:b (2.98) BS23 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20749 6trc:b (2.98) BS24 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20750 6trc:b (2.98) BS25 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20751 6trc:b (2.98) BS26 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20752 6trc:b (2.98) BS27 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20753 6trc:b (2.98) BS28 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20754 6trc:b (2.98) BS29 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20755 6trc:b (2.98) BS30 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20756 6trc:b (2.98) BS31 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20757 6trc:b (2.98) BS32 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20758 6trc:b (2.98) BS33 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20759 6trc:b (2.98) BS34 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20760 6trc:b (2.98) BS35 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20761 6trc:b (2.98) BS36 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20762 6trc:b (2.98) BS37 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20763 6trc:b (2.98) BS38 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20764 6trc:b (2.98) BS39 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20765 6trc:b (2.98) BS40 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20766 6trc:b (2.98) BS41 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20767 6trc:b (2.98) BS42 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20768 6trc:b (2.98) BS43 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20769 6trc:b (2.98) BS44 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20770 6trc:b (2.98) BS45 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20771 6trc:b (2.98) BS46 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20772 6trc:b (2.98) BS47 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20773 6trc:b (2.98) BS48 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20774 6trc:f (2.98) BS02 CLA ? GO:0009522 ... P0A401 N/A
    20775 6trc:f (2.98) BS03 CLA ? GO:0009522 ... P0A401 N/A
    20776 6trc:f (2.98) BS04 CLA ? GO:0009522 ... P0A401 N/A
    20777 6trc:f (2.98) BS05 CLA ? GO:0009522 ... P0A401 N/A
    20778 6trc:f (2.98) BS06 CLA ? GO:0009522 ... P0A401 N/A
    20779 6trc:f (2.98) BS07 CLA ? GO:0009522 ... P0A401 N/A
    20780 6trc:i (2.98) BS01 CLA ? GO:0009522 ... P0A427 N/A
    20781 6trc:i (2.98) BS02 CLA ? GO:0009522 ... P0A427 N/A
    20782 6trc:i (2.98) BS03 CLA ? GO:0009522 ... P0A427 N/A
    20783 6trc:i (2.98) BS04 CLA ? GO:0009522 ... P0A427 N/A
    20784 6trc:j (2.98) BS01 CLA ? GO:0009522 ... P0A429 N/A
    20785 6trc:j (2.98) BS02 CLA ? GO:0009522 ... P0A429 N/A
    20786 6trc:j (2.98) BS03 CLA ? GO:0009522 ... P0A429 N/A
    20787 6trc:j (2.98) BS04 CLA ? GO:0009522 ... P0A429 N/A
    20788 6trc:k (2.98) BS01 CLA ? GO:0009522 ... P0A425 N/A
    20789 6trc:k (2.98) BS02 CLA ? GO:0009522 ... P0A425 N/A
    20790 6trc:k (2.98) BS03 CLA ? GO:0009522 ... P0A425 N/A
    20791 6trc:l (2.98) BS01 CLA ? GO:0009522 ... Q8DGB4 N/A
    20792 6trc:l (2.98) BS02 CLA ? GO:0009522 ... Q8DGB4 N/A
    20793 6trc:l (2.98) BS03 CLA ? GO:0009522 ... Q8DGB4 N/A
    20794 6trc:l (2.98) BS04 CLA ? GO:0009522 ... Q8DGB4 N/A
    20795 6trc:l (2.98) BS06 CLA ? GO:0009522 ... Q8DGB4 N/A
    20796 6trc:l (2.98) BS07 CLA ? GO:0009522 ... Q8DGB4 N/A
    20797 6trc:l (2.98) BS08 CLA ? GO:0009522 ... Q8DGB4 N/A
    20798 6trc:l (2.98) BS09 CLA ? GO:0009522 ... Q8DGB4 N/A
    20799 6trc:m (2.98) BS01 CLA ? GO:0009522 ... P0A403 N/A
    20800 6trc:y (2.98) BS01 CLA ? GO:0009522 ... P0A403 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218