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BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    20401 6tra:B (2.85) BS28 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20402 6tra:B (2.85) BS29 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20403 6tra:B (2.85) BS30 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20404 6tra:B (2.85) BS31 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20405 6tra:B (2.85) BS32 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20406 6tra:B (2.85) BS33 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20407 6tra:B (2.85) BS34 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20408 6tra:B (2.85) BS35 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20409 6tra:B (2.85) BS36 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20410 6tra:B (2.85) BS37 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20411 6tra:B (2.85) BS38 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20412 6tra:B (2.85) BS39 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20413 6tra:B (2.85) BS40 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20414 6tra:B (2.85) BS41 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20415 6tra:B (2.85) BS42 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20416 6tra:B (2.85) BS43 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20417 6tra:B (2.85) BS44 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20418 6tra:B (2.85) BS45 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20419 6tra:B (2.85) BS46 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20420 6tra:B (2.85) BS47 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20421 6tra:F (2.85) BS02 CLA ? GO:0009522 ... P0A401 N/A
    20422 6tra:F (2.85) BS03 CLA ? GO:0009522 ... P0A401 N/A
    20423 6tra:F (2.85) BS04 CLA ? GO:0009522 ... P0A401 N/A
    20424 6tra:F (2.85) BS05 CLA ? GO:0009522 ... P0A401 N/A
    20425 6tra:F (2.85) BS06 CLA ? GO:0009522 ... P0A401 N/A
    20426 6tra:F (2.85) BS07 CLA ? GO:0009522 ... P0A401 N/A
    20427 6tra:I (2.85) BS01 CLA ? GO:0009522 ... P0A427 N/A
    20428 6tra:I (2.85) BS02 CLA ? GO:0009522 ... P0A427 N/A
    20429 6tra:I (2.85) BS03 CLA ? GO:0009522 ... P0A427 N/A
    20430 6tra:J (2.85) BS01 CLA ? GO:0009522 ... P0A429 N/A
    20431 6tra:J (2.85) BS02 CLA ? GO:0009522 ... P0A429 N/A
    20432 6tra:J (2.85) BS03 CLA ? GO:0009522 ... P0A429 N/A
    20433 6tra:J (2.85) BS04 CLA ? GO:0009522 ... P0A429 N/A
    20434 6tra:K (2.85) BS01 CLA ? GO:0009522 ... P0A425 N/A
    20435 6tra:K (2.85) BS02 CLA ? GO:0009522 ... P0A425 N/A
    20436 6tra:K (2.85) BS03 CLA ? GO:0009522 ... P0A425 N/A
    20437 6tra:K (2.85) BS04 CLA ? GO:0009522 ... P0A425 N/A
    20438 6tra:L (2.85) BS01 CLA ? GO:0009522 ... Q8DGB4 N/A
    20439 6tra:L (2.85) BS02 CLA ? GO:0009522 ... Q8DGB4 N/A
    20440 6tra:L (2.85) BS03 CLA ? GO:0009522 ... Q8DGB4 N/A
    20441 6tra:L (2.85) BS04 CLA ? GO:0009522 ... Q8DGB4 N/A
    20442 6tra:L (2.85) BS06 CLA ? GO:0009522 ... Q8DGB4 N/A
    20443 6tra:L (2.85) BS07 CLA ? GO:0009522 ... Q8DGB4 N/A
    20444 6tra:L (2.85) BS08 CLA ? GO:0009522 ... Q8DGB4 N/A
    20445 6tra:M (2.85) BS01 CLA ? GO:0009522 ... P0A403 N/A
    20446 6tra:M (2.85) BS02 CLA ? GO:0009522 ... P0A403 N/A
    20447 6trc:0 (2.98) BS01 CLA ? GO:0009522 ... Q8DGB4 N/A
    20448 6trc:0 (2.98) BS02 CLA ? GO:0009522 ... Q8DGB4 N/A
    20449 6trc:0 (2.98) BS03 CLA ? GO:0009522 ... Q8DGB4 N/A
    20450 6trc:0 (2.98) BS04 CLA ? GO:0009522 ... Q8DGB4 N/A
    20451 6trc:0 (2.98) BS05 CLA ? GO:0009522 ... Q8DGB4 N/A
    20452 6trc:0 (2.98) BS07 CLA ? GO:0009522 ... Q8DGB4 N/A
    20453 6trc:0 (2.98) BS08 CLA ? GO:0009522 ... Q8DGB4 N/A
    20454 6trc:0 (2.98) BS09 CLA ? GO:0009522 ... Q8DGB4 N/A
    20455 6trc:1 (2.98) BS02 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20456 6trc:1 (2.98) BS03 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20457 6trc:1 (2.98) BS04 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20458 6trc:1 (2.98) BS05 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20459 6trc:1 (2.98) BS06 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20460 6trc:1 (2.98) BS07 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20461 6trc:1 (2.98) BS08 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20462 6trc:1 (2.98) BS09 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20463 6trc:1 (2.98) BS10 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20464 6trc:1 (2.98) BS11 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20465 6trc:1 (2.98) BS12 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20466 6trc:1 (2.98) BS13 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20467 6trc:1 (2.98) BS14 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20468 6trc:1 (2.98) BS15 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20469 6trc:1 (2.98) BS16 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20470 6trc:1 (2.98) BS17 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20471 6trc:1 (2.98) BS18 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20472 6trc:1 (2.98) BS19 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20473 6trc:1 (2.98) BS20 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20474 6trc:1 (2.98) BS21 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20475 6trc:1 (2.98) BS22 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20476 6trc:1 (2.98) BS23 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20477 6trc:1 (2.98) BS24 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20478 6trc:1 (2.98) BS25 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20479 6trc:1 (2.98) BS26 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20480 6trc:1 (2.98) BS27 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20481 6trc:1 (2.98) BS28 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20482 6trc:1 (2.98) BS29 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20483 6trc:1 (2.98) BS30 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20484 6trc:1 (2.98) BS31 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20485 6trc:1 (2.98) BS32 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20486 6trc:1 (2.98) BS33 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20487 6trc:1 (2.98) BS34 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20488 6trc:1 (2.98) BS35 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20489 6trc:1 (2.98) BS36 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20490 6trc:1 (2.98) BS37 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20491 6trc:1 (2.98) BS38 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20492 6trc:1 (2.98) BS39 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20493 6trc:1 (2.98) BS40 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20494 6trc:1 (2.98) BS41 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20495 6trc:1 (2.98) BS42 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20496 6trc:1 (2.98) BS43 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20497 6trc:1 (2.98) BS46 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20498 6trc:1 (2.98) BS47 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20499 6trc:1 (2.98) BS48 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20500 6trc:1 (2.98) BS49 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20501 6trc:1 (2.98) BS50 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20502 6trc:2 (2.98) BS02 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20503 6trc:2 (2.98) BS03 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20504 6trc:2 (2.98) BS04 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20505 6trc:2 (2.98) BS05 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20506 6trc:2 (2.98) BS06 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20507 6trc:2 (2.98) BS09 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20508 6trc:2 (2.98) BS10 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20509 6trc:2 (2.98) BS11 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20510 6trc:2 (2.98) BS12 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20511 6trc:2 (2.98) BS13 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20512 6trc:2 (2.98) BS14 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20513 6trc:2 (2.98) BS15 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20514 6trc:2 (2.98) BS16 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20515 6trc:2 (2.98) BS17 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20516 6trc:2 (2.98) BS18 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20517 6trc:2 (2.98) BS19 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20518 6trc:2 (2.98) BS20 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20519 6trc:2 (2.98) BS21 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20520 6trc:2 (2.98) BS22 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20521 6trc:2 (2.98) BS23 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20522 6trc:2 (2.98) BS24 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20523 6trc:2 (2.98) BS25 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20524 6trc:2 (2.98) BS26 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20525 6trc:2 (2.98) BS27 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20526 6trc:2 (2.98) BS28 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20527 6trc:2 (2.98) BS29 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20528 6trc:2 (2.98) BS30 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20529 6trc:2 (2.98) BS31 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20530 6trc:2 (2.98) BS32 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20531 6trc:2 (2.98) BS33 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20532 6trc:2 (2.98) BS34 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20533 6trc:2 (2.98) BS35 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20534 6trc:2 (2.98) BS36 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20535 6trc:2 (2.98) BS37 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20536 6trc:2 (2.98) BS38 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20537 6trc:2 (2.98) BS39 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20538 6trc:2 (2.98) BS40 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20539 6trc:2 (2.98) BS41 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20540 6trc:2 (2.98) BS42 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20541 6trc:2 (2.98) BS43 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20542 6trc:2 (2.98) BS44 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20543 6trc:2 (2.98) BS45 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20544 6trc:2 (2.98) BS46 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20545 6trc:2 (2.98) BS47 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20546 6trc:2 (2.98) BS48 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20547 6trc:6 (2.98) BS02 CLA ? GO:0009522 ... P0A401 N/A
    20548 6trc:6 (2.98) BS03 CLA ? GO:0009522 ... P0A401 N/A
    20549 6trc:6 (2.98) BS04 CLA ? GO:0009522 ... P0A401 N/A
    20550 6trc:6 (2.98) BS05 CLA ? GO:0009522 ... P0A401 N/A
    20551 6trc:6 (2.98) BS06 CLA ? GO:0009522 ... P0A401 N/A
    20552 6trc:6 (2.98) BS07 CLA ? GO:0009522 ... P0A401 N/A
    20553 6trc:7 (2.98) BS01 CLA ? GO:0009522 ... P0A427 N/A
    20554 6trc:7 (2.98) BS02 CLA ? GO:0009522 ... P0A427 N/A
    20555 6trc:7 (2.98) BS03 CLA ? GO:0009522 ... P0A427 N/A
    20556 6trc:7 (2.98) BS04 CLA ? GO:0009522 ... P0A427 N/A
    20557 6trc:8 (2.98) BS01 CLA ? GO:0009522 ... P0A429 N/A
    20558 6trc:8 (2.98) BS02 CLA ? GO:0009522 ... P0A429 N/A
    20559 6trc:8 (2.98) BS03 CLA ? GO:0009522 ... P0A429 N/A
    20560 6trc:8 (2.98) BS04 CLA ? GO:0009522 ... P0A429 N/A
    20561 6trc:9 (2.98) BS01 CLA ? GO:0009522 ... P0A425 N/A
    20562 6trc:9 (2.98) BS02 CLA ? GO:0009522 ... P0A425 N/A
    20563 6trc:9 (2.98) BS03 CLA ? GO:0009522 ... P0A425 N/A
    20564 6trc:A (2.98) BS02 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20565 6trc:A (2.98) BS03 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20566 6trc:A (2.98) BS04 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20567 6trc:A (2.98) BS05 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20568 6trc:A (2.98) BS06 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20569 6trc:A (2.98) BS07 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20570 6trc:A (2.98) BS08 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20571 6trc:A (2.98) BS09 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20572 6trc:A (2.98) BS10 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20573 6trc:A (2.98) BS11 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20574 6trc:A (2.98) BS12 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20575 6trc:A (2.98) BS13 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20576 6trc:A (2.98) BS14 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20577 6trc:A (2.98) BS15 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20578 6trc:A (2.98) BS16 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20579 6trc:A (2.98) BS17 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20580 6trc:A (2.98) BS18 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20581 6trc:A (2.98) BS19 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20582 6trc:A (2.98) BS20 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20583 6trc:A (2.98) BS21 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20584 6trc:A (2.98) BS22 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20585 6trc:A (2.98) BS23 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20586 6trc:A (2.98) BS24 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20587 6trc:A (2.98) BS25 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20588 6trc:A (2.98) BS26 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20589 6trc:A (2.98) BS27 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20590 6trc:A (2.98) BS28 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20591 6trc:A (2.98) BS29 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20592 6trc:A (2.98) BS30 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20593 6trc:A (2.98) BS31 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20594 6trc:A (2.98) BS32 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20595 6trc:A (2.98) BS33 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20596 6trc:A (2.98) BS34 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20597 6trc:A (2.98) BS35 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20598 6trc:A (2.98) BS36 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20599 6trc:A (2.98) BS37 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20600 6trc:A (2.98) BS38 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218