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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    20201 6tcl:BB (3.2) BS06 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20202 6tcl:BB (3.2) BS07 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20203 6tcl:BB (3.2) BS08 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20204 6tcl:BB (3.2) BS09 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20205 6tcl:BB (3.2) BS10 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20206 6tcl:BB (3.2) BS11 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20207 6tcl:BB (3.2) BS12 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20208 6tcl:BB (3.2) BS13 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20209 6tcl:BB (3.2) BS14 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20210 6tcl:BB (3.2) BS15 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20211 6tcl:BB (3.2) BS16 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20212 6tcl:BB (3.2) BS17 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20213 6tcl:BB (3.2) BS18 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20214 6tcl:BB (3.2) BS19 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20215 6tcl:BB (3.2) BS20 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20216 6tcl:BB (3.2) BS21 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20217 6tcl:BB (3.2) BS22 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20218 6tcl:BB (3.2) BS23 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20219 6tcl:BB (3.2) BS24 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20220 6tcl:BB (3.2) BS25 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20221 6tcl:BB (3.2) BS26 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20222 6tcl:BB (3.2) BS27 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20223 6tcl:BB (3.2) BS28 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20224 6tcl:BB (3.2) BS29 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20225 6tcl:BB (3.2) BS30 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20226 6tcl:BB (3.2) BS31 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20227 6tcl:BB (3.2) BS32 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20228 6tcl:BB (3.2) BS33 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20229 6tcl:BB (3.2) BS34 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20230 6tcl:BB (3.2) BS35 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20231 6tcl:BB (3.2) BS36 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20232 6tcl:BB (3.2) BS37 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20233 6tcl:BB (3.2) BS38 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20234 6tcl:BB (3.2) BS39 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20235 6tcl:BB (3.2) BS42 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20236 6tcl:BB (3.2) BS43 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20237 6tcl:BB (3.2) BS44 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20238 6tcl:BB (3.2) BS46 CLA 1.97.1.12 GO:0000287 ... P58565 32170279
    20239 6tcl:F (3.2) BS01 CLA ? GO:0009522 ... P58564 32170279
    20240 6tcl:F (3.2) BS02 CLA ? GO:0009522 ... P58564 32170279
    20241 6tcl:F (3.2) BS03 CLA ? GO:0009522 ... P58564 32170279
    20242 6tcl:F1 (3.2) BS01 CLA ? GO:0009522 ... P58564 32170279
    20243 6tcl:F1 (3.2) BS02 CLA ? GO:0009522 ... P58564 32170279
    20244 6tcl:F1 (3.2) BS03 CLA ? GO:0009522 ... P58564 32170279
    20245 6tcl:F2 (3.2) BS01 CLA ? GO:0009522 ... P58564 32170279
    20246 6tcl:F2 (3.2) BS02 CLA ? GO:0009522 ... P58564 32170279
    20247 6tcl:F2 (3.2) BS03 CLA ? GO:0009522 ... P58564 32170279
    20248 6tcl:FF (3.2) BS01 CLA ? GO:0009522 ... P58564 32170279
    20249 6tcl:FF (3.2) BS02 CLA ? GO:0009522 ... P58564 32170279
    20250 6tcl:FF (3.2) BS03 CLA ? GO:0009522 ... P58564 32170279
    20251 6tcl:I (3.2) BS01 CLA ? GO:0009522 ... P58560 32170279
    20252 6tcl:I (3.2) BS02 CLA ? GO:0009522 ... P58560 32170279
    20253 6tcl:I (3.2) BS03 CLA ? GO:0009522 ... P58560 32170279
    20254 6tcl:I1 (3.2) BS01 CLA ? GO:0009522 ... P58560 32170279
    20255 6tcl:I1 (3.2) BS02 CLA ? GO:0009522 ... P58560 32170279
    20256 6tcl:I1 (3.2) BS03 CLA ? GO:0009522 ... P58560 32170279
    20257 6tcl:I2 (3.2) BS01 CLA ? GO:0009522 ... P58560 32170279
    20258 6tcl:I2 (3.2) BS02 CLA ? GO:0009522 ... P58560 32170279
    20259 6tcl:I2 (3.2) BS03 CLA ? GO:0009522 ... P58560 32170279
    20260 6tcl:II (3.2) BS01 CLA ? GO:0009522 ... P58560 32170279
    20261 6tcl:II (3.2) BS02 CLA ? GO:0009522 ... P58560 32170279
    20262 6tcl:J (3.2) BS01 CLA ? GO:0009522 ... P58568 32170279
    20263 6tcl:J (3.2) BS02 CLA ? GO:0009522 ... P58568 32170279
    20264 6tcl:J (3.2) BS03 CLA ? GO:0009522 ... P58568 32170279
    20265 6tcl:J (3.2) BS04 CLA ? GO:0009522 ... P58568 32170279
    20266 6tcl:J1 (3.2) BS01 CLA ? GO:0009522 ... P58568 32170279
    20267 6tcl:J1 (3.2) BS02 CLA ? GO:0009522 ... P58568 32170279
    20268 6tcl:J1 (3.2) BS03 CLA ? GO:0009522 ... P58568 32170279
    20269 6tcl:J2 (3.2) BS01 CLA ? GO:0009522 ... P58568 32170279
    20270 6tcl:J2 (3.2) BS02 CLA ? GO:0009522 ... P58568 32170279
    20271 6tcl:J2 (3.2) BS03 CLA ? GO:0009522 ... P58568 32170279
    20272 6tcl:J2 (3.2) BS04 CLA ? GO:0009522 ... P58568 32170279
    20273 6tcl:J2 (3.2) BS05 CLA ? GO:0009522 ... P58568 32170279
    20274 6tcl:JJ (3.2) BS01 CLA ? GO:0009522 ... P58568 32170279
    20275 6tcl:JJ (3.2) BS02 CLA ? GO:0009522 ... P58568 32170279
    20276 6tcl:JJ (3.2) BS03 CLA ? GO:0009522 ... P58568 32170279
    20277 6tcl:JJ (3.2) BS04 CLA ? GO:0009522 ... P58568 32170279
    20278 6tcl:K (3.2) BS01 CLA ? GO:0009522 ... P58583 32170279
    20279 6tcl:K (3.2) BS02 CLA ? GO:0009522 ... P58583 32170279
    20280 6tcl:K (3.2) BS03 CLA ? GO:0009522 ... P58583 32170279
    20281 6tcl:K1 (3.2) BS01 CLA ? GO:0009522 ... P58583 32170279
    20282 6tcl:K1 (3.2) BS02 CLA ? GO:0009522 ... P58583 32170279
    20283 6tcl:K1 (3.2) BS03 CLA ? GO:0009522 ... P58583 32170279
    20284 6tcl:K2 (3.2) BS01 CLA ? GO:0009522 ... P58583 32170279
    20285 6tcl:K2 (3.2) BS02 CLA ? GO:0009522 ... P58583 32170279
    20286 6tcl:K2 (3.2) BS03 CLA ? GO:0009522 ... P58583 32170279
    20287 6tcl:K2 (3.2) BS04 CLA ? GO:0009522 ... P58583 32170279
    20288 6tcl:K2 (3.2) BS05 CLA ? GO:0009522 ... P58583 32170279
    20289 6tcl:KK (3.2) BS01 CLA ? GO:0009522 ... P58583 32170279
    20290 6tcl:KK (3.2) BS02 CLA ? GO:0009522 ... P58583 32170279
    20291 6tcl:KK (3.2) BS03 CLA ? GO:0009522 ... P58583 32170279
    20292 6tcl:KK (3.2) BS04 CLA ? GO:0009522 ... P58583 32170279
    20293 6tcl:L (3.2) BS01 CLA ? GO:0009522 ... P58577 32170279
    20294 6tcl:L (3.2) BS02 CLA ? GO:0009522 ... P58577 32170279
    20295 6tcl:L (3.2) BS03 CLA ? GO:0009522 ... P58577 32170279
    20296 6tcl:L (3.2) BS04 CLA ? GO:0009522 ... P58577 32170279
    20297 6tcl:L (3.2) BS05 CLA ? GO:0009522 ... P58577 32170279
    20298 6tcl:L (3.2) BS06 CLA ? GO:0009522 ... P58577 32170279
    20299 6tcl:L1 (3.2) BS01 CLA ? GO:0009522 ... P58577 32170279
    20300 6tcl:L1 (3.2) BS02 CLA ? GO:0009522 ... P58577 32170279
    20301 6tcl:L1 (3.2) BS03 CLA ? GO:0009522 ... P58577 32170279
    20302 6tcl:L1 (3.2) BS06 CLA ? GO:0009522 ... P58577 32170279
    20303 6tcl:L1 (3.2) BS07 CLA ? GO:0009522 ... P58577 32170279
    20304 6tcl:L1 (3.2) BS08 CLA ? GO:0009522 ... P58577 32170279
    20305 6tcl:L1 (3.2) BS09 CLA ? GO:0009522 ... P58577 32170279
    20306 6tcl:L2 (3.2) BS01 CLA ? GO:0009522 ... P58577 32170279
    20307 6tcl:L2 (3.2) BS02 CLA ? GO:0009522 ... P58577 32170279
    20308 6tcl:L2 (3.2) BS03 CLA ? GO:0009522 ... P58577 32170279
    20309 6tcl:L2 (3.2) BS06 CLA ? GO:0009522 ... P58577 32170279
    20310 6tcl:L2 (3.2) BS07 CLA ? GO:0009522 ... P58577 32170279
    20311 6tcl:L2 (3.2) BS08 CLA ? GO:0009522 ... P58577 32170279
    20312 6tcl:L2 (3.2) BS09 CLA ? GO:0009522 ... P58577 32170279
    20313 6tcl:LL (3.2) BS02 CLA ? GO:0009522 ... P58577 32170279
    20314 6tcl:LL (3.2) BS03 CLA ? GO:0009522 ... P58577 32170279
    20315 6tcl:LL (3.2) BS04 CLA ? GO:0009522 ... P58577 32170279
    20316 6tcl:LL (3.2) BS05 CLA ? GO:0009522 ... P58577 32170279
    20317 6tcl:LL (3.2) BS06 CLA ? GO:0009522 ... P58577 32170279
    20318 6tcl:LL (3.2) BS07 CLA ? GO:0009522 ... P58577 32170279
    20319 6tcl:LL (3.2) BS08 CLA ? GO:0009522 ... P58577 32170279
    20320 6tcl:M (3.2) BS01 CLA ? GO:0009522 ... Q8YNB0 32170279
    20321 6tcl:M1 (3.2) BS01 CLA ? GO:0009522 ... Q8YNB0 32170279
    20322 6tcl:M2 (3.2) BS01 CLA ? GO:0009522 ... Q8YNB0 32170279
    20323 6tcl:MM (3.2) BS01 CLA ? GO:0009522 ... Q8YNB0 32170279
    20324 6tcl:X (3.2) BS01 CLA ? N/A P58566 32170279
    20325 6tcl:X1 (3.2) BS01 CLA ? N/A P58566 32170279
    20326 6tcl:X2 (3.2) BS01 CLA ? N/A P58566 32170279
    20327 6tcl:X2 (3.2) BS02 CLA ? N/A P58566 32170279
    20328 6tcl:XX (3.2) BS01 CLA ? N/A P58566 32170279
    20329 6tjv:F (3.2) BS01 CLA ? GO:0003954 ... Q8DKF5 31980611
    20330 6tra:A (2.85) BS02 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20331 6tra:A (2.85) BS03 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20332 6tra:A (2.85) BS04 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20333 6tra:A (2.85) BS05 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20334 6tra:A (2.85) BS06 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20335 6tra:A (2.85) BS07 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20336 6tra:A (2.85) BS08 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20337 6tra:A (2.85) BS09 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20338 6tra:A (2.85) BS10 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20339 6tra:A (2.85) BS11 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20340 6tra:A (2.85) BS12 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20341 6tra:A (2.85) BS13 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20342 6tra:A (2.85) BS14 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20343 6tra:A (2.85) BS15 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20344 6tra:A (2.85) BS16 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20345 6tra:A (2.85) BS17 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20346 6tra:A (2.85) BS18 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20347 6tra:A (2.85) BS19 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20348 6tra:A (2.85) BS20 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20349 6tra:A (2.85) BS21 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20350 6tra:A (2.85) BS22 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20351 6tra:A (2.85) BS23 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20352 6tra:A (2.85) BS24 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20353 6tra:A (2.85) BS25 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20354 6tra:A (2.85) BS26 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20355 6tra:A (2.85) BS27 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20356 6tra:A (2.85) BS28 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20357 6tra:A (2.85) BS29 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20358 6tra:A (2.85) BS30 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20359 6tra:A (2.85) BS31 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20360 6tra:A (2.85) BS32 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20361 6tra:A (2.85) BS33 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20362 6tra:A (2.85) BS34 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20363 6tra:A (2.85) BS35 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20364 6tra:A (2.85) BS36 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20365 6tra:A (2.85) BS37 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20366 6tra:A (2.85) BS38 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20367 6tra:A (2.85) BS39 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20368 6tra:A (2.85) BS40 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20369 6tra:A (2.85) BS41 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20370 6tra:A (2.85) BS42 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20371 6tra:A (2.85) BS43 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20372 6tra:A (2.85) BS45 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20373 6tra:A (2.85) BS47 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20374 6tra:A (2.85) BS48 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20375 6tra:A (2.85) BS49 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20376 6tra:A (2.85) BS50 CLA 1.97.1.12 GO:0000287 ... P0A405 N/A
    20377 6tra:B (2.85) BS02 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20378 6tra:B (2.85) BS03 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20379 6tra:B (2.85) BS04 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20380 6tra:B (2.85) BS05 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20381 6tra:B (2.85) BS06 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20382 6tra:B (2.85) BS07 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20383 6tra:B (2.85) BS10 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20384 6tra:B (2.85) BS11 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20385 6tra:B (2.85) BS12 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20386 6tra:B (2.85) BS13 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20387 6tra:B (2.85) BS14 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20388 6tra:B (2.85) BS15 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20389 6tra:B (2.85) BS16 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20390 6tra:B (2.85) BS17 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20391 6tra:B (2.85) BS18 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20392 6tra:B (2.85) BS19 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20393 6tra:B (2.85) BS20 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20394 6tra:B (2.85) BS21 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20395 6tra:B (2.85) BS22 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20396 6tra:B (2.85) BS23 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20397 6tra:B (2.85) BS24 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20398 6tra:B (2.85) BS25 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20399 6tra:B (2.85) BS26 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A
    20400 6tra:B (2.85) BS27 CLA 1.97.1.12 GO:0000287 ... P0A407 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218