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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 1108 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 2x1z:M (1.8) BS05 CL7 ? GO:0016168 ... P80484 20102711
    2 7coy:aA (2.5) BS03 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    3 7coy:aA (2.5) BS04 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    4 7coy:aA (2.5) BS05 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    5 7coy:aA (2.5) BS06 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    6 7coy:aA (2.5) BS07 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    7 7coy:aA (2.5) BS08 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    8 7coy:aA (2.5) BS09 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    9 7coy:aA (2.5) BS10 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    10 7coy:aA (2.5) BS11 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    11 7coy:aA (2.5) BS12 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    12 7coy:aA (2.5) BS13 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    13 7coy:aA (2.5) BS14 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    14 7coy:aA (2.5) BS15 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    15 7coy:aA (2.5) BS16 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    16 7coy:aA (2.5) BS17 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    17 7coy:aA (2.5) BS18 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    18 7coy:aA (2.5) BS19 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    19 7coy:aA (2.5) BS20 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    20 7coy:aA (2.5) BS21 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    21 7coy:aA (2.5) BS22 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    22 7coy:aA (2.5) BS23 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    23 7coy:aA (2.5) BS24 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    24 7coy:aA (2.5) BS25 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    25 7coy:aA (2.5) BS26 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    26 7coy:aA (2.5) BS27 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    27 7coy:aA (2.5) BS28 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    28 7coy:aA (2.5) BS29 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    29 7coy:aA (2.5) BS30 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    30 7coy:aA (2.5) BS31 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    31 7coy:aA (2.5) BS32 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    32 7coy:aA (2.5) BS33 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    33 7coy:aA (2.5) BS34 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    34 7coy:aA (2.5) BS35 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    35 7coy:aA (2.5) BS36 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    36 7coy:aA (2.5) BS37 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    37 7coy:aA (2.5) BS40 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    38 7coy:aA (2.5) BS41 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    39 7coy:aA (2.5) BS43 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    40 7coy:aB (2.5) BS04 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    41 7coy:aB (2.5) BS05 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    42 7coy:aB (2.5) BS06 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    43 7coy:aB (2.5) BS07 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    44 7coy:aB (2.5) BS09 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    45 7coy:aB (2.5) BS10 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    46 7coy:aB (2.5) BS12 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    47 7coy:aB (2.5) BS13 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    48 7coy:aB (2.5) BS14 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    49 7coy:aB (2.5) BS15 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    50 7coy:aB (2.5) BS16 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    51 7coy:aB (2.5) BS17 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    52 7coy:aB (2.5) BS18 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    53 7coy:aB (2.5) BS19 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    54 7coy:aB (2.5) BS20 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    55 7coy:aB (2.5) BS21 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    56 7coy:aB (2.5) BS22 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    57 7coy:aB (2.5) BS23 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    58 7coy:aB (2.5) BS24 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    59 7coy:aB (2.5) BS25 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    60 7coy:aB (2.5) BS26 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    61 7coy:aB (2.5) BS27 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    62 7coy:aB (2.5) BS28 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    63 7coy:aB (2.5) BS29 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    64 7coy:aB (2.5) BS30 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    65 7coy:aB (2.5) BS31 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    66 7coy:aB (2.5) BS32 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    67 7coy:aB (2.5) BS34 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    68 7coy:aB (2.5) BS35 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    69 7coy:aB (2.5) BS36 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    70 7coy:aB (2.5) BS37 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    71 7coy:aB (2.5) BS38 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    72 7coy:aI (2.5) BS02 CL7 N/A GO:0009522 ... N/A 33879791
    73 7coy:aI (2.5) BS03 CL7 N/A GO:0009522 ... N/A 33879791
    74 7coy:aI (2.5) BS04 CL7 N/A GO:0009522 ... N/A 33879791
    75 7coy:aJ (2.5) BS01 CL7 ? GO:0009522 ... B0C7S6 33879791
    76 7coy:aJ (2.5) BS02 CL7 ? GO:0009522 ... B0C7S6 33879791
    77 7coy:aJ (2.5) BS03 CL7 ? GO:0009522 ... B0C7S6 33879791
    78 7coy:aK (2.5) BS01 CL7 ? GO:0009522 ... B0CA71 33879791
    79 7coy:aL (2.5) BS01 CL7 ? GO:0009522 ... B0C7S4 33879791
    80 7coy:aL (2.5) BS02 CL7 ? GO:0009522 ... B0C7S4 33879791
    81 7coy:aL (2.5) BS03 CL7 ? GO:0009522 ... B0C7S4 33879791
    82 7coy:aL (2.5) BS04 CL7 ? GO:0009522 ... B0C7S4 33879791
    83 7coy:aL (2.5) BS05 CL7 ? GO:0009522 ... B0C7S4 33879791
    84 7coy:aL (2.5) BS06 CL7 ? GO:0009522 ... B0C7S4 33879791
    85 7coy:aL (2.5) BS07 CL7 ? GO:0009522 ... B0C7S4 33879791
    86 7coy:aL (2.5) BS08 CL7 ? GO:0009522 ... B0C7S4 33879791
    87 7coy:aL (2.5) BS09 CL7 ? GO:0009522 ... B0C7S4 33879791
    88 7coy:bA (2.5) BS02 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    89 7coy:bA (2.5) BS03 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    90 7coy:bA (2.5) BS04 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    91 7coy:bA (2.5) BS05 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    92 7coy:bA (2.5) BS06 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    93 7coy:bA (2.5) BS07 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    94 7coy:bA (2.5) BS08 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    95 7coy:bA (2.5) BS09 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    96 7coy:bA (2.5) BS10 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    97 7coy:bA (2.5) BS11 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    98 7coy:bA (2.5) BS12 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    99 7coy:bA (2.5) BS13 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    100 7coy:bA (2.5) BS14 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    101 7coy:bA (2.5) BS15 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    102 7coy:bA (2.5) BS16 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    103 7coy:bA (2.5) BS17 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    104 7coy:bA (2.5) BS18 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    105 7coy:bA (2.5) BS19 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    106 7coy:bA (2.5) BS20 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    107 7coy:bA (2.5) BS21 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    108 7coy:bA (2.5) BS22 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    109 7coy:bA (2.5) BS23 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    110 7coy:bA (2.5) BS24 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    111 7coy:bA (2.5) BS25 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    112 7coy:bA (2.5) BS26 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    113 7coy:bA (2.5) BS27 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    114 7coy:bA (2.5) BS28 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    115 7coy:bA (2.5) BS29 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    116 7coy:bA (2.5) BS30 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    117 7coy:bA (2.5) BS31 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    118 7coy:bA (2.5) BS32 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    119 7coy:bA (2.5) BS33 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    120 7coy:bA (2.5) BS34 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    121 7coy:bA (2.5) BS35 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    122 7coy:bA (2.5) BS36 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    123 7coy:bA (2.5) BS40 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    124 7coy:bA (2.5) BS41 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    125 7coy:bA (2.5) BS43 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    126 7coy:bB (2.5) BS03 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    127 7coy:bB (2.5) BS04 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    128 7coy:bB (2.5) BS05 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    129 7coy:bB (2.5) BS06 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    130 7coy:bB (2.5) BS09 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    131 7coy:bB (2.5) BS10 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    132 7coy:bB (2.5) BS12 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    133 7coy:bB (2.5) BS13 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    134 7coy:bB (2.5) BS14 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    135 7coy:bB (2.5) BS15 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    136 7coy:bB (2.5) BS16 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    137 7coy:bB (2.5) BS17 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    138 7coy:bB (2.5) BS18 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    139 7coy:bB (2.5) BS19 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    140 7coy:bB (2.5) BS20 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    141 7coy:bB (2.5) BS21 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    142 7coy:bB (2.5) BS22 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    143 7coy:bB (2.5) BS23 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    144 7coy:bB (2.5) BS24 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    145 7coy:bB (2.5) BS25 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    146 7coy:bB (2.5) BS26 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    147 7coy:bB (2.5) BS27 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    148 7coy:bB (2.5) BS28 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    149 7coy:bB (2.5) BS29 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    150 7coy:bB (2.5) BS30 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    151 7coy:bB (2.5) BS31 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    152 7coy:bB (2.5) BS32 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    153 7coy:bB (2.5) BS34 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    154 7coy:bB (2.5) BS35 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    155 7coy:bB (2.5) BS36 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    156 7coy:bB (2.5) BS37 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    157 7coy:bB (2.5) BS38 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    158 7coy:bB (2.5) BS39 CL7 1.97.1.12 GO:0000287 ... B0C475 33879791
    159 7coy:bI (2.5) BS02 CL7 N/A GO:0009522 ... N/A 33879791
    160 7coy:bI (2.5) BS03 CL7 N/A GO:0009522 ... N/A 33879791
    161 7coy:bI (2.5) BS04 CL7 N/A GO:0009522 ... N/A 33879791
    162 7coy:bJ (2.5) BS01 CL7 ? GO:0009522 ... B0C7S6 33879791
    163 7coy:bJ (2.5) BS02 CL7 ? GO:0009522 ... B0C7S6 33879791
    164 7coy:bJ (2.5) BS03 CL7 ? GO:0009522 ... B0C7S6 33879791
    165 7coy:bK (2.5) BS01 CL7 ? GO:0009522 ... B0CA71 33879791
    166 7coy:bL (2.5) BS01 CL7 ? GO:0009522 ... B0C7S4 33879791
    167 7coy:bL (2.5) BS02 CL7 ? GO:0009522 ... B0C7S4 33879791
    168 7coy:bL (2.5) BS03 CL7 ? GO:0009522 ... B0C7S4 33879791
    169 7coy:bL (2.5) BS04 CL7 ? GO:0009522 ... B0C7S4 33879791
    170 7coy:bL (2.5) BS05 CL7 ? GO:0009522 ... B0C7S4 33879791
    171 7coy:bL (2.5) BS06 CL7 ? GO:0009522 ... B0C7S4 33879791
    172 7coy:bL (2.5) BS07 CL7 ? GO:0009522 ... B0C7S4 33879791
    173 7coy:bL (2.5) BS08 CL7 ? GO:0009522 ... B0C7S4 33879791
    174 7coy:bL (2.5) BS09 CL7 ? GO:0009522 ... B0C7S4 33879791
    175 7coy:cA (2.5) BS02 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    176 7coy:cA (2.5) BS03 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    177 7coy:cA (2.5) BS04 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    178 7coy:cA (2.5) BS05 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    179 7coy:cA (2.5) BS06 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    180 7coy:cA (2.5) BS07 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    181 7coy:cA (2.5) BS08 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    182 7coy:cA (2.5) BS09 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    183 7coy:cA (2.5) BS10 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    184 7coy:cA (2.5) BS11 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    185 7coy:cA (2.5) BS12 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    186 7coy:cA (2.5) BS13 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    187 7coy:cA (2.5) BS14 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    188 7coy:cA (2.5) BS15 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    189 7coy:cA (2.5) BS16 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    190 7coy:cA (2.5) BS17 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    191 7coy:cA (2.5) BS18 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    192 7coy:cA (2.5) BS19 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    193 7coy:cA (2.5) BS20 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    194 7coy:cA (2.5) BS21 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    195 7coy:cA (2.5) BS22 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    196 7coy:cA (2.5) BS23 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    197 7coy:cA (2.5) BS24 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    198 7coy:cA (2.5) BS25 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    199 7coy:cA (2.5) BS26 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    200 7coy:cA (2.5) BS27 CL7 1.97.1.12 GO:0000287 ... B0C474 33879791
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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