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BioLiP
Download all results in tab-seperated text for 20 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 1oar:H (2.23) BS01 AZN N/A N/A N/A 12610298 MOAD: Kd=40nM
    PDBbind: -logKd/Ki=7.40, Kd=40nM
    2 1oar:I (2.23) BS01 AZN N/A N/A N/A 12610298 MOAD: Kd=40nM
    3 1oar:J (2.23) BS01 AZN N/A N/A N/A 12610298 MOAD: Kd=40nM
    4 1oar:K (2.23) BS01 AZN N/A N/A N/A 12610298 MOAD: Kd=40nM
    5 1oar:L (2.23) BS01 AZN ? GO:0002250 ... P01724 12610298 PDBbind: -logKd/Ki=7.40, Kd=40nM
    6 1oar:M (2.23) BS01 AZN ? GO:0002250 ... P01724 12610298
    7 1oar:N (2.23) BS01 AZN ? GO:0002250 ... P01724 12610298
    8 1oar:O (2.23) BS01 AZN ? GO:0002250 ... P01724 12610298
    9 5scl:A (2.134) BS03 AZN 2.7.1.40 GO:0000287 ... P30613 35290845
    10 5scl:B (2.134) BS03 AZN 2.7.1.40 GO:0000287 ... P30613 35290845
    11 5scl:C (2.134) BS03 AZN 2.7.1.40 GO:0000287 ... P30613 35290845
    12 5scl:E (2.134) BS03 AZN 2.7.1.40 GO:0000287 ... P30613 35290845
    13 5scl:F (2.134) BS03 AZN 2.7.1.40 GO:0000287 ... P30613 35290845
    14 5scl:G (2.134) BS03 AZN 2.7.1.40 GO:0000287 ... P30613 35290845
    15 5y2u:B (1.98) BS01 AZN 5.4.2.11
    5.4.2.4    		 GO:0003824 ... P18669 N/A BindingDB: IC50=2300nM
    16 5y2u:C (1.98) BS01 AZN 5.4.2.11
    5.4.2.4    		 GO:0003824 ... P18669 N/A BindingDB: IC50=2300nM
    17 7u8y:A (2.22) BS01 AZN 3.1.11.2 GO:0003676 ... Q91XB0 N/A
    18 7u8y:A (2.22) BS02 AZN 3.1.11.2 GO:0003676 ... Q91XB0 N/A
    19 7u8y:B (2.22) BS01 AZN 3.1.11.2 GO:0003676 ... Q91XB0 N/A
    20 7u8y:B (2.22) BS02 AZN 3.1.11.2 GO:0003676 ... Q91XB0 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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