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BioLiP
Download all results in tab-seperated text for 9664 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    8801 8ppi:B (1.65) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    8802 8pq5:A (4.4) BS01 ATP N/A N/A N/A N/A
    8803 8pq5:A (4.4) BS02 ATP N/A N/A N/A N/A
    8804 8pq5:B (4.4) BS01 ATP N/A N/A N/A N/A
    8805 8pq5:B (4.4) BS02 ATP N/A N/A N/A N/A
    8806 8pqw:A (4.2) BS03 ATP ? GO:0003723 ... Q14204 38547289
    8807 8pqx:A (3.3) BS01 ATP 3.6.4.6 GO:0000502 ... P55072 N/A
    8808 8pqy:A (3.8) BS03 ATP ? GO:0003723 ... Q14204 38547289
    8809 8pqz:A (5.5) BS02 ATP ? GO:0003723 ... Q14204 38547289
    8810 8pqz:J (5.5) BS02 ATP ? GO:0003723 ... Q14204 38547289
    8811 8pr4:J (3.5) BS01 ATP ? GO:0005737 ... I3LHK5 38547289
    8812 8ptk:H (10.0) BS01 ATP 3.6.4.- GO:0005515 ... Q6QAQ1 38547289
    8813 8ptk:J (10.0) BS01 ATP ? GO:0005737 ... I3LHK5 38547289
    8814 8ptk:e (10.0) BS02 ATP ? GO:0003723 ... Q14204 38547289
    8815 8ptk:f (10.0) BS02 ATP ? GO:0003723 ... Q14204 38547289
    8816 8ptk:m (10.0) BS02 ATP ? GO:0003723 ... Q14204 38547289
    8817 8ptk:n (10.0) BS02 ATP ? GO:0003723 ... Q14204 38547289
    8818 8q3w:A (3.18) BS01 ATP N/A GO:0005524 ... Q45619 38926614
    8819 8q3w:B (3.18) BS01 ATP N/A GO:0005524 ... Q45619 38926614
    8820 8q3w:C (3.18) BS01 ATP N/A GO:0005524 ... Q45619 38926614
    8821 8q3w:D (3.18) BS01 ATP N/A GO:0005524 ... Q45619 38926614
    8822 8q3w:D (3.18) BS03 ATP N/A GO:0005524 ... Q45619 38926614
    8823 8q3w:E (3.18) BS01 ATP N/A GO:0005524 ... Q45619 38926614
    8824 8q3w:F (3.18) BS01 ATP N/A GO:0005524 ... Q45619 38926614
    8825 8q3w:G (3.18) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    8826 8q3w:G (3.18) BS03 ATP N/A GO:0005524 ... Q45619 38926614
    8827 8q3w:H (3.18) BS01 ATP N/A GO:0005524 ... Q45619 38926614
    8828 8q3w:I (3.18) BS01 ATP N/A GO:0005524 ... Q45619 38926614
    8829 8q3w:J (3.18) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    8830 8q4d:F (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    8831 8q4d:G (3.62) BS01 ATP N/A GO:0005524 ... Q45619 38926614
    8832 8q4d:H (3.62) BS01 ATP N/A GO:0005524 ... Q45619 38926614
    8833 8q4d:I (3.62) BS03 ATP N/A GO:0005524 ... Q45619 38926614
    8834 8q4d:J (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    8835 8q4d:K (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    8836 8q4d:L (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    8837 8q4d:M (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    8838 8q4d:N (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    8839 8q4d:P (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    8840 8q4d:Q (3.62) BS01 ATP N/A GO:0005524 ... Q45619 38926614
    8841 8q4d:R (3.62) BS01 ATP N/A GO:0005524 ... Q45619 38926614
    8842 8q4d:S (3.62) BS03 ATP N/A GO:0005524 ... Q45619 38926614
    8843 8q4d:T (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    8844 8q4d:U (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    8845 8q4d:V (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    8846 8q4d:W (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    8847 8q4d:X (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    8848 8q65:A (2.54) BS01 ATP N/A N/A A0QSU3 39107302
    8849 8q65:A (2.54) BS02 ATP N/A N/A A0QSU3 39107302
    8850 8q65:A (2.54) BS03 ATP N/A N/A A0QSU3 39107302
    8851 8q65:E (2.54) BS01 ATP N/A N/A A0QSU3 39107302
    8852 8q65:E (2.54) BS02 ATP N/A N/A A0QSU3 39107302
    8853 8q6p:2 (3.53) BS01 ATP 3.6.4.12 GO:0000727 ... P55861 37820732
    8854 8q6p:3 (3.53) BS02 ATP 3.6.4.12 GO:0000727 ... P49739 37820732
    8855 8q6p:3 (3.53) BS03 ATP 3.6.4.12 GO:0000727 ... P49739 37820732
    8856 8q6p:5 (3.53) BS01 ATP 3.6.4.12 GO:0000727 ... P55862 37820732
    8857 8q6p:5 (3.53) BS02 ATP 3.6.4.12 GO:0000727 ... P55862 37820732
    8858 8q6p:6 (3.53) BS01 ATP 3.6.4.12 GO:0000727 ... Q5FWY4 37820732
    8859 8q6p:6 (3.53) BS02 ATP 3.6.4.12 GO:0000727 ... Q5FWY4 37820732
    8860 8q6p:7 (3.53) BS01 ATP 3.6.4.12 GO:0000727 ... Q7ZXB1 37820732
    8861 8qcf:M (2.55) BS02 ATP 3.6.4.13 GO:0003676 ... P35207 37879335
    8862 8qff:A (2.1) BS02 ATP ? GO:0004016 ... K9TLZ5 38185322
    8863 8qfg:A (1.7) BS02 ATP ? GO:0004016 ... K9TLZ5 38185322
    8864 8qfh:A (1.8) BS02 ATP ? GO:0004016 ... K9TLZ5 38185322
    8865 8qfi:A (1.9) BS02 ATP ? GO:0004016 ... K9TLZ5 38185322
    8866 8qfj:A (1.9) BS02 ATP ? GO:0004016 ... K9TLZ5 38185322
    8867 8qj7:C (3.07) BS03 ATP 2.7.7.102 GO:0000287 ... P49642 38335062
    8868 8qqp:A (2.35) BS01 ATP N/A N/A A0QSU3 39107302
    8869 8qqp:B (2.35) BS01 ATP N/A N/A A0QSU3 39107302
    8870 8qqp:C (2.35) BS01 ATP N/A N/A A0QSU3 39107302
    8871 8qqp:D (2.35) BS01 ATP N/A N/A A0QSU3 39107302
    8872 8qqp:E (2.35) BS01 ATP N/A N/A A0QSU3 39107302
    8873 8qqp:F (2.35) BS01 ATP N/A N/A A0QSU3 39107302
    8874 8qqp:G (2.35) BS01 ATP N/A N/A A0QSU3 39107302
    8875 8qqp:H (2.35) BS01 ATP N/A N/A A0QSU3 39107302
    8876 8qqq:A (2.43) BS01 ATP N/A N/A A0QSU3 39107302
    8877 8qqq:B (2.43) BS01 ATP N/A N/A A0QSU3 39107302
    8878 8qqq:C (2.43) BS01 ATP N/A N/A A0QSU3 39107302
    8879 8qqq:D (2.43) BS01 ATP N/A N/A A0QSU3 39107302
    8880 8qqq:E (2.43) BS01 ATP N/A N/A A0QSU3 39107302
    8881 8qqq:F (2.43) BS01 ATP N/A N/A A0QSU3 39107302
    8882 8qqq:G (2.43) BS01 ATP N/A N/A A0QSU3 39107302
    8883 8qqq:H (2.43) BS01 ATP N/A N/A A0QSU3 39107302
    8884 8qqr:A (2.73) BS01 ATP N/A N/A A0QSU3 39107302
    8885 8qqr:B (2.73) BS01 ATP N/A N/A A0QSU3 39107302
    8886 8qqr:C (2.73) BS01 ATP N/A N/A A0QSU3 39107302
    8887 8qqr:D (2.73) BS01 ATP N/A N/A A0QSU3 39107302
    8888 8qqr:E (2.73) BS01 ATP N/A N/A A0QSU3 39107302
    8889 8qqr:F (2.73) BS01 ATP N/A N/A A0QSU3 39107302
    8890 8qqr:G (2.73) BS01 ATP N/A N/A A0QSU3 39107302
    8891 8qqr:H (2.73) BS01 ATP N/A N/A A0QSU3 39107302
    8892 8qqt:A (2.76) BS01 ATP N/A N/A A0QSU3 39107302
    8893 8qqt:B (2.76) BS01 ATP N/A N/A A0QSU3 39107302
    8894 8qqt:C (2.76) BS01 ATP N/A N/A A0QSU3 39107302
    8895 8qqt:D (2.76) BS01 ATP N/A N/A A0QSU3 39107302
    8896 8qqt:D (2.76) BS03 ATP N/A N/A A0QSU3 39107302
    8897 8qqt:E (2.76) BS01 ATP N/A N/A A0QSU3 39107302
    8898 8qqt:F (2.76) BS01 ATP N/A N/A A0QSU3 39107302
    8899 8qqt:G (2.76) BS01 ATP N/A N/A A0QSU3 39107302
    8900 8qqt:H (2.76) BS01 ATP N/A N/A A0QSU3 39107302
    8901 8qrk:X (6.69) BS02 ATP N/A GO:0003723 ... P51398 38969660
    8902 8qrl:X (3.34) BS02 ATP N/A GO:0003723 ... P51398 38969660
    8903 8qrm:X (3.05) BS02 ATP N/A GO:0003723 ... P51398 38969660
    8904 8qrn:X (2.98) BS02 ATP N/A GO:0003723 ... P51398 38969660
    8905 8qxu:A (12.0) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    8906 8qxu:B (12.0) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    8907 8qxu:C (12.0) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    8908 8qxu:D (12.0) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    8909 8qxu:E (12.0) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    8910 8qxu:F (12.0) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    8911 8qxu:G (12.0) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    8912 8qxv:A (13.6) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    8913 8qxv:B (13.6) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    8914 8qxv:C (13.6) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    8915 8qxv:D (13.6) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    8916 8qxv:E (13.6) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    8917 8qxv:F (13.6) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    8918 8qxv:G (13.6) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    8919 8r5n:A (1.812) BS01 ATP N/A N/A Q86Y01 39048679
    8920 8r5n:B (1.812) BS01 ATP N/A N/A Q86Y01 39048679
    8921 8r5n:B (1.812) BS02 ATP N/A N/A Q86Y01 39048679
    8922 8r64:A (3.2) BS01 ATP N/A N/A Q6PIW4 39071279
    8923 8r64:B (3.2) BS02 ATP N/A N/A Q6PIW4 39071279
    8924 8r64:B (3.2) BS03 ATP N/A N/A Q6PIW4 39071279
    8925 8r64:C (3.2) BS02 ATP N/A N/A Q6PIW4 39071279
    8926 8r64:C (3.2) BS03 ATP N/A N/A Q6PIW4 39071279
    8927 8r64:D (3.2) BS02 ATP N/A N/A Q6PIW4 39071279
    8928 8r64:D (3.2) BS03 ATP N/A N/A Q6PIW4 39071279
    8929 8r64:E (3.2) BS02 ATP N/A N/A Q6PIW4 39071279
    8930 8r64:F (3.2) BS02 ATP N/A N/A Q6PIW4 39071279
    8931 8rcd:A (3.2) BS02 ATP N/A N/A Q06609 39178838
    8932 8rcd:A (3.2) BS05 ATP N/A N/A Q06609 39178838
    8933 8rcd:B (3.2) BS02 ATP N/A N/A Q06609 39178838
    8934 8rcd:B (3.2) BS05 ATP N/A N/A Q06609 39178838
    8935 8rcd:C (3.2) BS02 ATP N/A N/A Q06609 39178838
    8936 8rcd:C (3.2) BS05 ATP N/A N/A Q06609 39178838
    8937 8rcd:D (3.2) BS02 ATP N/A N/A Q06609 39178838
    8938 8rcd:D (3.2) BS05 ATP N/A N/A Q06609 39178838
    8939 8rcd:E (3.2) BS02 ATP N/A N/A Q06609 39178838
    8940 8rcd:E (3.2) BS05 ATP N/A N/A Q06609 39178838
    8941 8rcd:F (3.2) BS02 ATP N/A N/A Q06609 39178838
    8942 8rcd:F (3.2) BS05 ATP N/A N/A Q06609 39178838
    8943 8rcd:G (3.2) BS02 ATP N/A N/A Q06609 39178838
    8944 8rcd:G (3.2) BS05 ATP N/A N/A Q06609 39178838
    8945 8rcd:H (3.2) BS02 ATP N/A N/A Q06609 39178838
    8946 8rcf:A (3.4) BS02 ATP N/A N/A Q06609 39178838
    8947 8rcf:A (3.4) BS04 ATP N/A N/A Q06609 39178838
    8948 8rcf:B (3.4) BS03 ATP N/A N/A Q06609 39178838
    8949 8rcf:B (3.4) BS05 ATP N/A N/A Q06609 39178838
    8950 8rcf:C (3.4) BS03 ATP N/A N/A Q06609 39178838
    8951 8rcf:C (3.4) BS05 ATP N/A N/A Q06609 39178838
    8952 8rcf:D (3.4) BS03 ATP N/A N/A Q06609 39178838
    8953 8rcf:D (3.4) BS05 ATP N/A N/A Q06609 39178838
    8954 8rcf:E (3.4) BS02 ATP N/A N/A Q06609 39178838
    8955 8rcf:E (3.4) BS04 ATP N/A N/A Q06609 39178838
    8956 8rcf:F (3.4) BS03 ATP N/A N/A Q06609 39178838
    8957 8rcf:F (3.4) BS05 ATP N/A N/A Q06609 39178838
    8958 8rcf:G (3.4) BS02 ATP N/A N/A Q06609 39178838
    8959 8rcf:G (3.4) BS05 ATP N/A N/A Q06609 39178838
    8960 8rcf:H (3.4) BS02 ATP N/A N/A Q06609 39178838
    8961 8rdu:D (2.3) BS02 ATP N/A N/A A0A8J0PCL3 38834066
    8962 8rdu:E (2.3) BS02 ATP N/A N/A A0A8J0PCL3 38834066
    8963 8rdu:E (2.3) BS03 ATP N/A N/A A0A8J0PCL3 38834066
    8964 8rdu:F (2.3) BS01 ATP N/A N/A A0A8J0PCL3 38834066
    8965 8rdu:F (2.3) BS02 ATP N/A N/A A0A8J0PCL3 38834066
    8966 8rdu:G (2.3) BS03 ATP N/A N/A A0A8J0PCL3 38834066
    8967 8rdu:G (2.3) BS04 ATP N/A N/A A0A8J0PCL3 38834066
    8968 8rdu:H (2.3) BS04 ATP N/A N/A A0A8J0PCL3 38834066
    8969 8rdu:H (2.3) BS05 ATP N/A N/A A0A8J0PCL3 38834066
    8970 8rdu:I (2.3) BS02 ATP N/A N/A A0A8J0PCL3 38834066
    8971 8rdu:I (2.3) BS03 ATP N/A N/A A0A8J0PCL3 38834066
    8972 8rdu:J (2.3) BS02 ATP N/A N/A A0A8J0PCL3 38834066
    8973 8rdu:J (2.3) BS03 ATP N/A N/A A0A8J0PCL3 38834066
    8974 8rdu:K (2.3) BS01 ATP N/A N/A A0A8J0PCL3 38834066
    8975 8rdu:K (2.3) BS02 ATP N/A N/A A0A8J0PCL3 38834066
    8976 8rdu:L (2.3) BS01 ATP N/A N/A A0A8J0PCL3 38834066
    8977 8rdu:L (2.3) BS02 ATP N/A N/A A0A8J0PCL3 38834066
    8978 8rdu:M (2.3) BS03 ATP N/A N/A A0A8J0PCL3 38834066
    8979 8rdu:M (2.3) BS04 ATP N/A N/A A0A8J0PCL3 38834066
    8980 8rdu:N (2.3) BS03 ATP N/A N/A A0A8J0PCL3 38834066
    8981 8rdu:N (2.3) BS04 ATP N/A N/A A0A8J0PCL3 38834066
    8982 8rdu:O (2.3) BS03 ATP N/A N/A A0A8J0PCL3 38834066
    8983 8rdu:O (2.3) BS04 ATP N/A N/A A0A8J0PCL3 38834066
    8984 8rdu:P (2.3) BS04 ATP N/A N/A A0A8J0PCL3 38834066
    8985 8rdu:P (2.3) BS05 ATP N/A N/A A0A8J0PCL3 38834066
    8986 8rdu:Q (2.3) BS01 ATP N/A N/A A0A8J0PCL3 38834066
    8987 8rj6:A (1.9) BS01 ATP N/A GO:0000287 ... P69441 39121211
    8988 8rku:D (2.3) BS01 ATP N/A N/A A0A8J0PCL3 38834066
    8989 8rku:E (2.3) BS01 ATP N/A N/A A0A8J0PCL3 38834066
    8990 8rku:E (2.3) BS02 ATP N/A N/A A0A8J0PCL3 38834066
    8991 8rku:F (2.3) BS01 ATP N/A N/A A0A8J0PCL3 38834066
    8992 8rku:F (2.3) BS02 ATP N/A N/A A0A8J0PCL3 38834066
    8993 8rku:G (2.3) BS01 ATP N/A N/A A0A8J0PCL3 38834066
    8994 8rku:G (2.3) BS02 ATP N/A N/A A0A8J0PCL3 38834066
    8995 8rku:H (2.3) BS02 ATP N/A N/A A0A8J0PCL3 38834066
    8996 8rku:H (2.3) BS03 ATP N/A N/A A0A8J0PCL3 38834066
    8997 8rku:I (2.3) BS02 ATP N/A N/A A0A8J0PCL3 38834066
    8998 8rku:I (2.3) BS03 ATP N/A N/A A0A8J0PCL3 38834066
    8999 8rku:J (2.3) BS01 ATP N/A N/A A0A8J0PCL3 38834066
    9000 8rku:J (2.3) BS02 ATP N/A N/A A0A8J0PCL3 38834066

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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