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BioLiP
Download all results in tab-seperated text for 9664 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    8201 8has:D (2.89) BS01 ATP ? GO:0005634 ... B4XT64 N/A
    8202 8has:E (2.89) BS01 ATP ? GO:0005634 ... B4XT64 N/A
    8203 8has:F (2.89) BS01 ATP ? GO:0005634 ... B4XT64 N/A
    8204 8hau:A (3.02) BS01 ATP ? N/A A2XXI5 N/A
    8205 8hau:B (3.02) BS01 ATP ? N/A A2XXI5 N/A
    8206 8hau:C (3.02) BS01 ATP ? N/A A2XXI5 N/A
    8207 8hau:D (3.02) BS01 ATP ? N/A A2XXI5 N/A
    8208 8hau:E (3.02) BS01 ATP ? N/A A2XXI5 N/A
    8209 8hau:F (3.02) BS01 ATP ? N/A A2XXI5 N/A
    8210 8hbw:A (2.57) BS01 ATP ? GO:0002024 ... P25874 37336486
    8211 8hd0:A (3.11) BS01 ATP ? GO:0000917 ... P0A9R7 N/A
    8212 8hd0:A (3.11) BS02 ATP ? GO:0000917 ... P0A9R7 N/A
    8213 8hd0:B (3.11) BS01 ATP ? GO:0000917 ... P0A9R7 N/A
    8214 8hd0:B (3.11) BS02 ATP ? GO:0000917 ... P0A9R7 N/A
    8215 8hf6:A (3.1) BS01 ATP 3.4.22.- GO:0005524 ... A0A0H2ZPI8 37935699
    8216 8hf6:B (3.1) BS01 ATP 3.4.22.- GO:0005524 ... A0A0H2ZPI8 37935699
    8217 8hf6:B (3.1) BS02 ATP 3.4.22.- GO:0005524 ... A0A0H2ZPI8 37935699
    8218 8hh1:A (2.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8219 8hh1:B (2.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8220 8hh1:C (2.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8221 8hh1:D (2.9) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8222 8hh1:E (2.9) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8223 8hh1:F (2.9) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8224 8hh2:A (3.0) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8225 8hh2:B (3.0) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8226 8hh2:C (3.0) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8227 8hh2:E (3.0) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8228 8hh2:F (3.0) BS02 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8229 8hh3:A (4.3) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8230 8hh3:B (4.3) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8231 8hh3:C (4.3) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8232 8hh3:E (4.3) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8233 8hh3:F (4.3) BS02 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8234 8hh4:A (3.1) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8235 8hh4:B (3.1) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8236 8hh4:C (3.1) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8237 8hh4:E (3.1) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8238 8hh4:F (3.1) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8239 8hh5:A (2.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8240 8hh5:B (2.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8241 8hh5:C (2.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8242 8hh5:E (2.9) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8243 8hh5:F (2.9) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8244 8hh6:A (2.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8245 8hh6:B (2.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8246 8hh6:B (2.9) BS02 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8247 8hh6:C (2.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8248 8hh6:E (2.9) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8249 8hh6:F (2.9) BS02 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8250 8hh7:A (2.5) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8251 8hh7:B (2.5) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8252 8hh7:B (2.5) BS02 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8253 8hh7:C (2.5) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8254 8hh7:F (2.5) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8255 8hh8:A (2.8) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8256 8hh8:B (2.8) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8257 8hh8:C (2.8) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8258 8hh8:F (2.8) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8259 8hh9:A (3.6) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8260 8hh9:B (3.6) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8261 8hh9:B (3.6) BS02 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8262 8hh9:C (3.6) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8263 8hh9:F (3.6) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8264 8hha:A (3.4) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8265 8hha:B (3.4) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8266 8hha:B (3.4) BS02 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8267 8hha:C (3.4) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8268 8hha:F (3.4) BS02 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8269 8hhb:A (3.5) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8270 8hhb:B (3.5) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8271 8hhb:B (3.5) BS02 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8272 8hhb:C (3.5) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8273 8hhb:F (3.5) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8274 8hhc:A (3.3) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8275 8hhc:B (3.3) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8276 8hhc:C (3.3) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    8277 8hhc:D (3.3) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8278 8hhc:F (3.3) BS02 ATP 7.1.2.2 GO:0005515 ... P07677 N/A
    8279 8ho6:A (2.1) BS01 ATP N/A GO:0004672 ... N/A 37304725
    8280 8hoa:A (1.676) BS01 ATP ? GO:0004672 ... A0A811MC32 37304725
    8281 8hpl:C (4.29) BS01 ATP ? GO:0005524 ... A0R2C0 37619560
    8282 8hpl:D (4.29) BS01 ATP ? GO:0005524 ... A0R2C0 37619560
    8283 8hpm:C (3.82) BS01 ATP ? GO:0005524 ... A0R2C0 37619560
    8284 8hpm:D (3.82) BS01 ATP ? GO:0005524 ... A0R2C0 37619560
    8285 8hpn:C (4.55) BS01 ATP ? GO:0005524 ... A0R2C0 37619560
    8286 8hpn:D (4.55) BS01 ATP ? GO:0005524 ... A0R2C0 37619560
    8287 8hpr:C (3.75) BS01 ATP ? GO:0005524 ... A0R2C0 37619560
    8288 8hpr:C (3.75) BS03 ATP ? GO:0005524 ... A0R2C0 37619560
    8289 8hpr:D (3.75) BS01 ATP ? GO:0005524 ... A0R2C0 37619560
    8290 8hpr:D (3.75) BS02 ATP ? GO:0005524 ... A0R2C0 37619560
    8291 8hps:C (3.51) BS01 ATP ? GO:0005524 ... A0R2C0 37619560
    8292 8hps:C (3.51) BS03 ATP ? GO:0005524 ... A0R2C0 37619560
    8293 8hps:D (3.51) BS01 ATP ? GO:0005524 ... A0R2C0 37619560
    8294 8hps:D (3.51) BS02 ATP ? GO:0005524 ... A0R2C0 37619560
    8295 8hr8:A (3.3) BS01 ATP N/A N/A N/A 36764292
    8296 8hr8:C (3.3) BS01 ATP N/A N/A N/A 36764292
    8297 8hr8:F (3.3) BS01 ATP N/A N/A N/A 36764292
    8298 8hr8:G (3.3) BS01 ATP N/A N/A N/A 36764292
    8299 8hr8:H (3.3) BS01 ATP N/A N/A N/A 36764292
    8300 8hr9:A (3.03) BS01 ATP N/A N/A N/A 36764292
    8301 8hr9:C (3.03) BS01 ATP N/A N/A N/A 36764292
    8302 8hr9:F (3.03) BS01 ATP N/A N/A N/A 36764292
    8303 8hr9:G (3.03) BS01 ATP N/A N/A N/A 36764292
    8304 8hr9:H (3.03) BS01 ATP N/A N/A N/A 36764292
    8305 8hr9:I (3.03) BS01 ATP N/A N/A N/A 36764292
    8306 8hr9:J (3.03) BS01 ATP N/A N/A N/A 36764292
    8307 8hr9:M (3.03) BS01 ATP N/A N/A N/A 36764292
    8308 8hr9:N (3.03) BS01 ATP N/A N/A N/A 36764292
    8309 8hr9:O (3.03) BS01 ATP N/A N/A N/A 36764292
    8310 8hra:B (3.76) BS02 ATP N/A N/A N/A 36764292
    8311 8hra:E (3.76) BS02 ATP N/A N/A N/A 36764292
    8312 8hra:G (3.76) BS01 ATP N/A N/A N/A 36764292
    8313 8hra:H (3.76) BS02 ATP N/A N/A N/A 36764292
    8314 8hrb:B (3.78) BS02 ATP N/A N/A N/A 36764292
    8315 8hrb:E (3.78) BS02 ATP N/A N/A N/A 36764292
    8316 8hrb:G (3.78) BS01 ATP N/A N/A N/A 36764292
    8317 8hrb:H (3.78) BS02 ATP N/A N/A N/A 36764292
    8318 8hrb:K (3.78) BS02 ATP N/A N/A N/A 36764292
    8319 8hrb:P (3.78) BS02 ATP N/A N/A N/A 36764292
    8320 8hrb:Q (3.78) BS01 ATP N/A N/A N/A 36764292
    8321 8hrb:R (3.78) BS02 ATP N/A N/A N/A 36764292
    8322 8hwa:A (3.7) BS02 ATP 3.6.4.- GO:0004386 ... A0A7H0DN89 38177671
    8323 8hwa:A (3.7) BS03 ATP 3.6.4.- GO:0004386 ... A0A7H0DN89 38177671
    8324 8hwa:B (3.7) BS01 ATP 3.6.4.- GO:0004386 ... A0A7H0DN89 38177671
    8325 8hwa:C (3.7) BS02 ATP 3.6.4.- GO:0004386 ... A0A7H0DN89 38177671
    8326 8hwa:D (3.7) BS02 ATP 3.6.4.- GO:0004386 ... A0A7H0DN89 38177671
    8327 8hwa:F (3.7) BS01 ATP 3.6.4.- GO:0004386 ... A0A7H0DN89 38177671
    8328 8hwb:A (3.9) BS02 ATP 3.6.4.- GO:0004386 ... A0A7H0DN89 38177671
    8329 8hwb:B (3.9) BS01 ATP 3.6.4.- GO:0004386 ... A0A7H0DN89 38177671
    8330 8hwb:C (3.9) BS02 ATP 3.6.4.- GO:0004386 ... A0A7H0DN89 38177671
    8331 8hwb:D (3.9) BS02 ATP 3.6.4.- GO:0004386 ... A0A7H0DN89 38177671
    8332 8hwb:D (3.9) BS03 ATP 3.6.4.- GO:0004386 ... A0A7H0DN89 38177671
    8333 8hwb:E (3.9) BS03 ATP 3.6.4.- GO:0004386 ... A0A7H0DN89 38177671
    8334 8hwe:A (3.3) BS01 ATP 3.6.4.- GO:0004386 ... A0A7H0DN89 38177671
    8335 8hwe:B (3.3) BS01 ATP 3.6.4.- GO:0004386 ... A0A7H0DN89 38177671
    8336 8hwe:C (3.3) BS01 ATP 3.6.4.- GO:0004386 ... A0A7H0DN89 38177671
    8337 8hwe:C (3.3) BS02 ATP 3.6.4.- GO:0004386 ... A0A7H0DN89 38177671
    8338 8hwe:D (3.3) BS01 ATP 3.6.4.- GO:0004386 ... A0A7H0DN89 38177671
    8339 8hwe:E (3.3) BS01 ATP 3.6.4.- GO:0004386 ... A0A7H0DN89 38177671
    8340 8hwe:E (3.3) BS02 ATP 3.6.4.- GO:0004386 ... A0A7H0DN89 38177671
    8341 8i3a:A (3.04) BS01 ATP ? GO:0005524 ... Q84TH5 37666961
    8342 8i3a:A (3.04) BS03 ATP ? GO:0005524 ... Q84TH5 37666961
    8343 8i3a:B (3.04) BS01 ATP ? GO:0005524 ... Q84TH5 37666961
    8344 8i3a:B (3.04) BS02 ATP ? GO:0005524 ... Q84TH5 37666961
    8345 8i3b:A (3.08) BS01 ATP ? GO:0005524 ... Q84TH5 37666961
    8346 8i3b:A (3.08) BS02 ATP ? GO:0005524 ... Q84TH5 37666961
    8347 8i3b:B (3.08) BS01 ATP ? GO:0005524 ... Q84TH5 37666961
    8348 8i3b:B (3.08) BS02 ATP ? GO:0005524 ... Q84TH5 37666961
    8349 8i49:A (2.41) BS01 ATP ? N/A Q00IB3 N/A
    8350 8i49:B (2.41) BS01 ATP ? N/A Q00IB3 N/A
    8351 8i49:C (2.41) BS01 ATP ? N/A Q00IB3 N/A
    8352 8i49:D (2.41) BS01 ATP ? N/A Q00IB3 N/A
    8353 8i49:E (2.41) BS01 ATP ? N/A Q00IB3 N/A
    8354 8i49:F (2.41) BS01 ATP ? N/A Q00IB3 N/A
    8355 8i6r:B (4.0) BS01 ATP ? GO:0005524 ... Q9I6C0 37186861
    8356 8i6r:B (4.0) BS03 ATP ? GO:0005524 ... Q9I6C0 37186861
    8357 8i6r:D (4.0) BS01 ATP ? GO:0005524 ... Q9I6C0 37186861
    8358 8i6r:D (4.0) BS02 ATP ? GO:0005524 ... Q9I6C0 37186861
    8359 8i6s:B (4.4) BS01 ATP ? GO:0005524 ... Q9I6C0 37186861
    8360 8i6s:B (4.4) BS03 ATP ? GO:0005524 ... Q9I6C0 37186861
    8361 8i6s:D (4.4) BS01 ATP ? GO:0005524 ... Q9I6C0 37186861
    8362 8i6s:D (4.4) BS02 ATP ? GO:0005524 ... Q9I6C0 37186861
    8363 8i85:A (2.17) BS01 ATP 2.7.1.103 GO:0005524 ... D2B3F1 38114770
    8364 8i8g:A (3.0) BS02 ATP 2.7.1.103 GO:0005524 ... D2B3F1 38114770
    8365 8i8h:A (2.02) BS02 ATP 2.7.1.103 GO:0005524 ... D2B3F1 38114770
    8366 8iab:A (2.96) BS01 ATP ? GO:0005247 ... P92941 37573431
    8367 8iab:B (2.96) BS02 ATP ? GO:0005247 ... P92941 37573431
    8368 8iad:A (3.16) BS01 ATP ? GO:0005247 ... P92941 37573431
    8369 8iad:B (3.16) BS02 ATP ? GO:0005247 ... P92941 37573431
    8370 8icn:A (2.8) BS03 ATP 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 8841119
    8371 8icn:A (2.8) BS04 ATP 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 8841119
    8372 8idd:A (4.0) BS01 ATP ? GO:0000287 ... O05779 38044344
    8373 8idd:B (4.0) BS01 ATP ? GO:0000287 ... O05779 38044344
    8374 8iek:P (3.2) BS01 ATP 7.6.2.- GO:0000166 ... Q9NQ11 37031211
    8375 8ipr:A (3.0) BS01 ATP ? GO:0005524 ... A4ZHS8 37144855
    8376 8ipr:A (3.0) BS02 ATP ? GO:0005524 ... A4ZHS8 37144855
    8377 8ipr:C (3.0) BS01 ATP 3.6.3.25 GO:0005524 ... A0QXA6 37144855
    8378 8ipr:C (3.0) BS03 ATP 3.6.3.25 GO:0005524 ... A0QXA6 37144855
    8379 8ipr:D (3.0) BS01 ATP ? GO:0005524 ... A4ZHS8 37144855
    8380 8ipr:D (3.0) BS02 ATP ? GO:0005524 ... A4ZHS8 37144855
    8381 8ipr:E (3.0) BS01 ATP 3.6.3.25 GO:0005524 ... A0QXA6 37144855
    8382 8ipr:E (3.0) BS03 ATP 3.6.3.25 GO:0005524 ... A0QXA6 37144855
    8383 8ipt:A (3.5) BS01 ATP 7.4.2.- GO:0005524 ... P29018 37144855
    8384 8ipt:A (3.5) BS02 ATP 7.4.2.- GO:0005524 ... P29018 37144855
    8385 8ipt:C (3.5) BS01 ATP 7.4.2.- GO:0005524 ... P23886 37144855
    8386 8ipt:C (3.5) BS02 ATP 7.4.2.- GO:0005524 ... P23886 37144855
    8387 8ipt:D (3.5) BS01 ATP 7.4.2.- GO:0005524 ... P23886 37144855
    8388 8ipt:D (3.5) BS02 ATP 7.4.2.- GO:0005524 ... P23886 37144855
    8389 8ipt:E (3.5) BS01 ATP 7.4.2.- GO:0005524 ... P29018 37144855
    8390 8ipt:E (3.5) BS02 ATP 7.4.2.- GO:0005524 ... P29018 37144855
    8391 8iwn:A (3.0) BS01 ATP ? GO:0005524 ... Q84TH5 N/A
    8392 8iwn:A (3.0) BS02 ATP ? GO:0005524 ... Q84TH5 N/A
    8393 8iwn:C (3.0) BS01 ATP ? GO:0005524 ... Q84TH5 N/A
    8394 8iwn:C (3.0) BS02 ATP ? GO:0005524 ... Q84TH5 N/A
    8395 8ixa:S (4.2) BS01 ATP ? GO:0003777 ... P33176 37439022
    8396 8ixa:T (4.2) BS01 ATP ? GO:0003777 ... P33176 37439022
    8397 8ixa:U (4.2) BS01 ATP ? GO:0003777 ... P33176 37439022
    8398 8ixa:V (4.2) BS01 ATP ? GO:0003777 ... P33176 37439022
    8399 8ixa:W (4.2) BS01 ATP ? GO:0003777 ... P33176 37439022
    8400 8ixa:X (4.2) BS01 ATP ? GO:0003777 ... P33176 37439022
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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