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BioLiP
Download all results in tab-seperated text for 9664 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    7801 8e7v:A (3.1) BS01 ATP ? GO:0005524 ... P0A6H1 N/A
    7802 8e7v:B (3.1) BS01 ATP ? GO:0005524 ... P0A6H1 N/A
    7803 8e7v:C (3.1) BS01 ATP ? GO:0005524 ... P0A6H1 N/A
    7804 8e7v:D (3.1) BS01 ATP ? GO:0005524 ... P0A6H1 N/A
    7805 8e7v:E (3.1) BS01 ATP ? GO:0005524 ... P0A6H1 N/A
    7806 8e8q:A (3.12) BS01 ATP ? GO:0005524 ... P0A6H1 N/A
    7807 8e8q:B (3.12) BS01 ATP ? GO:0005524 ... P0A6H1 N/A
    7808 8e8q:C (3.12) BS01 ATP ? GO:0005524 ... P0A6H1 N/A
    7809 8e8q:D (3.12) BS01 ATP ? GO:0005524 ... P0A6H1 N/A
    7810 8e8q:D (3.12) BS02 ATP ? GO:0005524 ... P0A6H1 N/A
    7811 8e8q:E (3.12) BS01 ATP ? GO:0005524 ... P0A6H1 N/A
    7812 8e9b:B (3.5) BS01 ATP ? GO:0000147 ... Q9UUJ1 36442092
    7813 8ea3:A (3.7) BS03 ATP ? N/A A0A8J0PCL3 36442503
    7814 8ea3:A (3.7) BS04 ATP ? N/A A0A8J0PCL3 36442503
    7815 8ea3:B (3.7) BS04 ATP ? N/A A0A8J0PCL3 36442503
    7816 8ea3:B (3.7) BS05 ATP ? N/A A0A8J0PCL3 36442503
    7817 8ea3:C (3.7) BS05 ATP ? N/A A0A8J0PCL3 36442503
    7818 8ea3:C (3.7) BS06 ATP ? N/A A0A8J0PCL3 36442503
    7819 8ea3:D (3.7) BS02 ATP ? N/A A0A8J0PCL3 36442503
    7820 8ea3:E (3.7) BS02 ATP ? N/A A0A8J0PCL3 36442503
    7821 8ea3:E (3.7) BS03 ATP ? N/A A0A8J0PCL3 36442503
    7822 8ea3:F (3.7) BS01 ATP ? N/A A0A8J0PCL3 36442503
    7823 8ea3:F (3.7) BS02 ATP ? N/A A0A8J0PCL3 36442503
    7824 8ea3:G (3.7) BS01 ATP ? N/A A0A8J0PCL3 36442503
    7825 8ea3:H (3.7) BS02 ATP ? N/A A0A8J0PCL3 36442503
    7826 8ea3:I (3.7) BS02 ATP ? N/A A0A8J0PCL3 36442503
    7827 8ea3:J (3.7) BS02 ATP ? N/A A0A8J0PCL3 36442503
    7828 8ea3:K (3.7) BS03 ATP ? N/A A0A8J0PCL3 36442503
    7829 8ea3:K (3.7) BS04 ATP ? N/A A0A8J0PCL3 36442503
    7830 8ea3:L (3.7) BS02 ATP ? N/A A0A8J0PCL3 36442503
    7831 8ea4:A (3.0) BS01 ATP ? N/A A0A8J0PCL3 36442503
    7832 8ea4:B (3.0) BS02 ATP ? N/A A0A8J0PCL3 36442503
    7833 8ea4:C (3.0) BS04 ATP ? N/A A0A8J0PCL3 36442503
    7834 8ea4:C (3.0) BS05 ATP ? N/A A0A8J0PCL3 36442503
    7835 8ea4:D (3.0) BS03 ATP ? N/A A0A8J0PCL3 36442503
    7836 8ea4:E (3.0) BS02 ATP ? N/A A0A8J0PCL3 36442503
    7837 8ea4:F (3.0) BS01 ATP ? N/A A0A8J0PCL3 36442503
    7838 8ea4:G (3.0) BS01 ATP ? N/A A0A8J0PCL3 36442503
    7839 8ea4:H (3.0) BS01 ATP ? N/A A0A8J0PCL3 36442503
    7840 8ea4:H (3.0) BS02 ATP ? N/A A0A8J0PCL3 36442503
    7841 8ea4:I (3.0) BS03 ATP ? N/A A0A8J0PCL3 36442503
    7842 8ea4:J (3.0) BS02 ATP ? N/A A0A8J0PCL3 36442503
    7843 8ea4:K (3.0) BS01 ATP ? N/A A0A8J0PCL3 36442503
    7844 8ea4:L (3.0) BS02 ATP ? N/A A0A8J0PCL3 36442503
    7845 8ea4:L (3.0) BS03 ATP ? N/A A0A8J0PCL3 36442503
    7846 8ea4:M (3.0) BS02 ATP ? N/A A0A8J0PCL3 36442503
    7847 8ear:A (3.5) BS02 ATP ? GO:0000902 ... P29994 36376291
    7848 8ear:B (3.5) BS03 ATP ? GO:0000902 ... P29994 36376291
    7849 8ear:C (3.5) BS06 ATP ? GO:0000902 ... P29994 36376291
    7850 8ear:D (3.5) BS04 ATP ? GO:0000902 ... P29994 36376291
    7851 8ecc:A (2.44) BS05 ATP 2.7.7.86 N/A Q8C6L5 N/A
    7852 8ee4:A (2.6) BS01 ATP N/A GO:0006302 ... N/A 38177683
    7853 8ee4:A (2.6) BS02 ATP N/A GO:0006302 ... N/A 38177683
    7854 8ee4:B (2.6) BS01 ATP N/A GO:0006302 ... N/A 38177683
    7855 8ee4:B (2.6) BS02 ATP N/A GO:0006302 ... N/A 38177683
    7856 8ee4:C (2.6) BS01 ATP N/A GO:0006302 ... N/A 38177683
    7857 8ee4:D (2.6) BS01 ATP N/A GO:0006302 ... N/A 38177683
    7858 8ee4:E (2.6) BS01 ATP N/A GO:0006302 ... N/A 38177683
    7859 8ee4:F (2.6) BS01 ATP N/A GO:0006302 ... N/A 38177683
    7860 8ee7:A (2.72) BS01 ATP N/A GO:0006302 ... N/A 38177683
    7861 8ee7:B (2.72) BS01 ATP N/A GO:0006302 ... N/A 38177683
    7862 8eea:A (2.6) BS01 ATP N/A GO:0006302 ... N/A 38177683
    7863 8eea:A (2.6) BS02 ATP N/A GO:0006302 ... N/A 38177683
    7864 8eea:B (2.6) BS01 ATP N/A GO:0006302 ... N/A 38177683
    7865 8eea:B (2.6) BS02 ATP N/A GO:0006302 ... N/A 38177683
    7866 8eea:C (2.6) BS01 ATP N/A GO:0006302 ... N/A 38177683
    7867 8eea:D (2.6) BS01 ATP N/A GO:0006302 ... N/A 38177683
    7868 8eea:E (2.6) BS01 ATP N/A GO:0006302 ... N/A 38177683
    7869 8eea:F (2.6) BS01 ATP N/A GO:0006302 ... N/A 38177683
    7870 8eig:A (3.6) BS01 ATP 5.6.1.6 GO:0005254 ... P13569 36264792
    7871 8eig:A (3.6) BS02 ATP 5.6.1.6 GO:0005254 ... P13569 36264792
    7872 8eio:A (2.8) BS04 ATP 5.6.1.6 GO:0005254 ... P13569 36264792
    7873 8eio:A (2.8) BS05 ATP 5.6.1.6 GO:0005254 ... P13569 36264792
    7874 8eiq:A (3.0) BS04 ATP 5.6.1.6 GO:0005254 ... P13569 36264792
    7875 8eiq:A (3.0) BS05 ATP 5.6.1.6 GO:0005254 ... P13569 36264792
    7876 8eop:A (3.7) BS01 ATP 7.6.2.1 GO:0000139 ... Q8IZY2 36484366
    7877 8eop:A (3.7) BS03 ATP 7.6.2.1 GO:0000139 ... Q8IZY2 36484366
    7878 8esc:R (3.1) BS01 ATP ? GO:0000785 ... P80428 36263929
    7879 8evw:A (1.22) BS01 ATP 6.3.2.4 GO:0003824 ... Q9HWI0 37581574
    7880 8evw:B (1.22) BS01 ATP 6.3.2.4 GO:0003824 ... Q9HWI0 37581574
    7881 8evy:A (2.35) BS05 ATP 6.3.2.4 GO:0003824 ... Q9LCT6 37581574
    7882 8evy:B (2.35) BS05 ATP 6.3.2.4 GO:0003824 ... Q9LCT6 37581574
    7883 8evy:C (2.35) BS05 ATP 6.3.2.4 GO:0003824 ... Q9LCT6 37581574
    7884 8eza:C (4.39) BS04 ATP 2.7.11.1 GO:0000460 ... P78527 37256947
    7885 8eza:L (4.39) BS04 ATP 2.7.11.1 GO:0000460 ... P78527 37256947
    7886 8ezb:C (8.9) BS04 ATP 2.7.11.1 GO:0000460 ... P78527 37256947
    7887 8ezb:L (8.9) BS04 ATP 2.7.11.1 GO:0000460 ... P78527 37256947
    7888 8f2k:A (2.9) BS01 ATP ? GO:0005524 ... P07251 36867738
    7889 8f2k:B (2.9) BS01 ATP ? GO:0005524 ... P07251 36867738
    7890 8f2k:B (2.9) BS02 ATP ? GO:0005524 ... P07251 36867738
    7891 8f2k:C (2.9) BS01 ATP ? GO:0005524 ... P07251 36867738
    7892 8f2k:E (2.9) BS01 ATP 7.1.2.2 GO:0005515 ... P00830 36867738
    7893 8f2k:F (2.9) BS01 ATP 7.1.2.2 GO:0005515 ... P00830 36867738
    7894 8f71:A (3.19) BS01 ATP 2.7.13.3 GO:0000155 ... Q6N5G3 36757561
    7895 8f71:B (3.19) BS01 ATP 2.7.13.3 GO:0000155 ... Q6N5G3 36757561
    7896 8fcu:Q (3.19) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7897 8fcv:Q (2.95) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7898 8fcv:R (2.95) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7899 8fcv:R (2.95) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7900 8fcv:S (2.95) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7901 8fcv:S (2.95) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7902 8fcv:T (2.95) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7903 8fcv:T (2.95) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7904 8fcv:U (2.95) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7905 8fcv:V (2.95) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7906 8fcv:V (2.95) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7907 8fcv:W (2.95) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7908 8fcv:W (2.95) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7909 8fcw:R (2.87) BS03 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7910 8fcw:S (2.87) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7911 8fcw:S (2.87) BS03 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7912 8fcw:T (2.87) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7913 8fcw:T (2.87) BS03 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7914 8fcw:U (2.87) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7915 8fcw:V (2.87) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7916 8fcw:V (2.87) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7917 8fcx:R (3.04) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7918 8fcx:S (3.04) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7919 8fcx:S (3.04) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7920 8fcx:T (3.04) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7921 8fcx:T (3.04) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7922 8fcx:U (3.04) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7923 8fcx:V (3.04) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7924 8fcx:V (3.04) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7925 8fcy:A (3.4) BS02 ATP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    7926 8fd6:A (2.9) BS01 ATP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    7927 8fdt:A (3.2) BS01 ATP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    7928 8ff4:Q (3.6) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7929 8ff4:R (3.6) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7930 8ff4:R (3.6) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7931 8ff4:S (3.6) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7932 8ff4:S (3.6) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7933 8ff4:T (3.6) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7934 8ff4:T (3.6) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7935 8ff4:U (3.6) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7936 8ff4:V (3.6) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7937 8ff4:V (3.6) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7938 8ff4:W (3.6) BS01 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7939 8ff4:W (3.6) BS02 ATP ? GO:0016887 ... A0A235IFM2 37557170
    7940 8ffv:A (3.01) BS01 ATP 3.6.4.10 GO:0001764 ... P07900 37945740
    7941 8ffv:B (3.01) BS01 ATP 3.6.4.10 GO:0001764 ... P07900 37945740
    7942 8ffw:A (3.23) BS01 ATP 3.6.4.10 GO:0001764 ... P07900 37945740
    7943 8ffw:B (3.23) BS01 ATP 3.6.4.10 GO:0001764 ... P07900 37945740
    7944 8fhk:C (2.9) BS01 ATP 7.6.2.- GO:0005524 ... O07550 37938578
    7945 8fhk:C (2.9) BS02 ATP 7.6.2.- GO:0005524 ... O07550 37938578
    7946 8fhk:D (2.9) BS01 ATP 7.6.2.- GO:0005524 ... O07549 37938578
    7947 8fhk:D (2.9) BS02 ATP 7.6.2.- GO:0005524 ... O07549 37938578
    7948 8fhn:A (3.0) BS01 ATP ? GO:0006811 ... P55017 36792826
    7949 8fhn:B (3.0) BS02 ATP ? GO:0006811 ... P55017 36792826
    7950 8fho:A (2.95) BS01 ATP ? GO:0006811 ... P55017 36792826
    7951 8fho:B (2.95) BS02 ATP ? GO:0006811 ... P55017 36792826
    7952 8fl8:A (4.2) BS01 ATP ? GO:0005524 ... P07251 38316880
    7953 8fl8:A (4.2) BS02 ATP ? GO:0005524 ... P07251 38316880
    7954 8fl8:B (4.2) BS01 ATP ? GO:0005524 ... P07251 38316880
    7955 8fl8:C (4.2) BS01 ATP ? GO:0005524 ... P07251 38316880
    7956 8fl8:E (4.2) BS01 ATP 7.1.2.2 GO:0005515 ... P00830 38316880
    7957 8fmv:C (3.34) BS01 ATP 7.6.2.- GO:0005524 ... O07550 37938578
    7958 8fmv:D (3.34) BS01 ATP 7.6.2.- GO:0005524 ... O07549 37938578
    7959 8fn6:2 (3.7) BS02 ATP ? GO:0003723 ... B6SBL9 37410820
    7960 8fny:A (2.22) BS01 ATP 2.7.11.20 GO:0004674 ... O00418 37068230
    7961 8fny:C (2.22) BS01 ATP 2.7.11.20 GO:0004674 ... O00418 37068230
    7962 8fo2:E (4.13) BS02 ATP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38127736
    7963 8fo8:C (3.88) BS02 ATP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38127736
    7964 8fo8:E (3.88) BS02 ATP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38127736
    7965 8fo9:A (3.48) BS02 ATP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38127736
    7966 8fo9:C (3.48) BS02 ATP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38127736
    7967 8fo9:E (3.48) BS02 ATP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38127736
    7968 8fo9:F (3.48) BS02 ATP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38127736
    7969 8fp5:A (1.7) BS01 ATP 2.7.11.22 GO:0000082 ... P24941 37270540
    7970 8fpf:C (3.27) BS01 ATP 7.6.2.- GO:0005524 ... O07550 37938578
    7971 8fpf:D (3.27) BS01 ATP 7.6.2.- GO:0005524 ... O07549 37938578
    7972 8fv7:AAA (2.08) BS01 ATP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    7973 8fv7:BBB (2.08) BS02 ATP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    7974 8fvu:A (3.6) BS01 ATP ? GO:0002221 ... Q13075 38177670
    7975 8fwi:A (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7976 8fwi:A (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7977 8fwi:B (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7978 8fwi:B (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7979 8fwi:C (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7980 8fwi:C (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7981 8fwi:D (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7982 8fwi:D (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7983 8fwi:E (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7984 8fwi:E (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7985 8fwi:F (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7986 8fwi:F (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7987 8fwi:G (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7988 8fwi:G (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7989 8fwi:H (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7990 8fwi:H (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7991 8fwi:I (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7992 8fwi:I (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7993 8fwi:J (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7994 8fwi:J (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7995 8fwi:K (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7996 8fwi:K (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7997 8fwi:L (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7998 8fwi:L (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7999 8fwj:A (2.7) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    8000 8fwj:A (2.7) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218