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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 9664 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    7601 8dbg:C (2.2) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7602 8dbg:D (2.2) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7603 8dbg:D (2.2) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7604 8dbg:E (2.2) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7605 8dbg:E (2.2) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7606 8dbg:F (2.2) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7607 8dbg:F (2.2) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7608 8dbh:A (2.2) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7609 8dbh:A (2.2) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7610 8dbh:B (2.2) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7611 8dbh:B (2.2) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7612 8dbh:C (2.2) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7613 8dbh:C (2.2) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7614 8dbh:D (2.2) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7615 8dbh:D (2.2) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7616 8dbh:E (2.2) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7617 8dbh:E (2.2) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7618 8dbh:F (2.2) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7619 8dbh:F (2.2) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7620 8dbh:G (2.2) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7621 8dbh:G (2.2) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7622 8dbh:H (2.2) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7623 8dbh:H (2.2) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7624 8dbh:I (2.2) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7625 8dbh:I (2.2) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7626 8dbh:J (2.2) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7627 8dbh:J (2.2) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7628 8dbh:K (2.2) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7629 8dbh:K (2.2) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7630 8dbh:L (2.2) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7631 8dbh:L (2.2) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7632 8dbi:A (2.0) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7633 8dbi:A (2.0) BS04 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7634 8dbi:B (2.0) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7635 8dbi:B (2.0) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7636 8dbi:C (2.0) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7637 8dbi:C (2.0) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7638 8dbi:D (2.0) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7639 8dbi:D (2.0) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7640 8dbi:E (2.0) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7641 8dbi:E (2.0) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7642 8dbi:F (2.0) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7643 8dbi:F (2.0) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7644 8dbj:A (2.0) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7645 8dbj:A (2.0) BS04 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7646 8dbj:B (2.0) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7647 8dbj:B (2.0) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7648 8dbj:C (2.0) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7649 8dbj:C (2.0) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7650 8dbj:D (2.0) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7651 8dbj:D (2.0) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7652 8dbj:E (2.0) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7653 8dbj:E (2.0) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7654 8dbj:F (2.0) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7655 8dbj:F (2.0) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7656 8dbj:G (2.0) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7657 8dbj:G (2.0) BS04 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7658 8dbj:H (2.0) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7659 8dbj:H (2.0) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7660 8dbj:I (2.0) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7661 8dbj:I (2.0) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7662 8dbj:J (2.0) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7663 8dbj:J (2.0) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7664 8dbj:K (2.0) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7665 8dbj:K (2.0) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7666 8dbj:L (2.0) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7667 8dbj:L (2.0) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7668 8dbk:A (2.1) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7669 8dbk:A (2.1) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7670 8dbk:B (2.1) BS04 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7671 8dbk:C (2.1) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7672 8dbk:C (2.1) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7673 8dbk:D (2.1) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7674 8dbk:D (2.1) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7675 8dbk:E (2.1) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7676 8dbk:E (2.1) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7677 8dbk:F (2.1) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7678 8dbn:A (2.4) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7679 8dbn:A (2.4) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7680 8dbn:B (2.4) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7681 8dbn:B (2.4) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7682 8dbn:C (2.4) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7683 8dbn:C (2.4) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7684 8dbn:D (2.4) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7685 8dbn:D (2.4) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7686 8dbn:E (2.4) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7687 8dbn:E (2.4) BS03 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7688 8dbn:F (2.4) BS01 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7689 8dbn:F (2.4) BS02 ATP 2.7.6.1 GO:0000287 ... P60891 36747094
    7690 8dbp:A (3.6) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7691 8dbp:B (3.6) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7692 8dbp:C (3.6) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7693 8dbp:D (3.6) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    7694 8dbp:E (3.6) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    7695 8dbq:A (4.0) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7696 8dbq:B (4.0) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7697 8dbq:C (4.0) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7698 8dbq:D (4.0) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    7699 8dbq:E (4.0) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    7700 8dbq:E (4.0) BS02 ATP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    7701 8dbr:A (3.2) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7702 8dbr:B (3.2) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7703 8dbr:C (3.2) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7704 8dbr:D (3.2) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    7705 8dbs:A (3.5) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7706 8dbs:B (3.5) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7707 8dbs:C (3.5) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7708 8dbs:D (3.5) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    7709 8dbt:A (3.1) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7710 8dbt:B (3.1) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7711 8dbt:C (3.1) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7712 8dbt:D (3.1) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    7713 8dbu:A (3.4) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7714 8dbu:B (3.4) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7715 8dbu:C (3.4) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7716 8dbu:D (3.4) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    7717 8dbv:A (3.7) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7718 8dbv:B (3.7) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7719 8dbv:C (3.7) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7720 8dbv:E (3.7) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    7721 8dbv:F (3.7) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    7722 8dbw:A (4.1) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7723 8dbw:B (4.1) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7724 8dbw:C (4.1) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    7725 8dbw:E (4.1) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    7726 8dbw:F (4.1) BS01 ATP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    7727 8dck:A (3.4) BS01 ATP ? GO:0005524 ... Q8FDZ8 36055198
    7728 8dck:A (3.4) BS03 ATP ? GO:0005524 ... Q8FDZ8 36055198
    7729 8dck:B (3.4) BS01 ATP ? GO:0005524 ... Q8FDZ8 36055198
    7730 8dck:B (3.4) BS02 ATP ? GO:0005524 ... Q8FDZ8 36055198
    7731 8dck:E (3.4) BS01 ATP ? GO:0005524 ... Q8FDZ8 36055198
    7732 8dck:E (3.4) BS03 ATP ? GO:0005524 ... Q8FDZ8 36055198
    7733 8dck:F (3.4) BS01 ATP ? GO:0005524 ... Q8FDZ8 36055198
    7734 8dck:F (3.4) BS02 ATP ? GO:0005524 ... Q8FDZ8 36055198
    7735 8dck:I (3.4) BS01 ATP ? GO:0005524 ... Q8FDZ8 36055198
    7736 8dck:I (3.4) BS03 ATP ? GO:0005524 ... Q8FDZ8 36055198
    7737 8dck:J (3.4) BS01 ATP ? GO:0005524 ... Q8FDZ8 36055198
    7738 8dck:J (3.4) BS02 ATP ? GO:0005524 ... Q8FDZ8 36055198
    7739 8dgc:A (3.4) BS01 ATP N/A N/A N/A 35951700
    7740 8dgc:B (3.4) BS01 ATP N/A N/A N/A 35951700
    7741 8dgc:C (3.4) BS01 ATP N/A N/A N/A 35951700
    7742 8dgc:D (3.4) BS01 ATP N/A N/A N/A 35951700
    7743 8dgc:E (3.4) BS01 ATP 3.1.21.-
    3.6.4.-
    GO:0004519 ... A0A7G3WWS0 35951700
    7744 8dgc:F (3.4) BS01 ATP 3.1.21.-
    3.6.4.-
    GO:0004519 ... A0A7G3WWS0 35951700
    7745 8dgc:G (3.4) BS01 ATP 3.1.21.-
    3.6.4.-
    GO:0004519 ... A0A7G3WWS0 35951700
    7746 8dgc:H (3.4) BS01 ATP 3.1.21.-
    3.6.4.-
    GO:0004519 ... A0A7G3WWS0 35951700
    7747 8dgf:A (2.9) BS01 ATP N/A GO:0016887 ... N/A 35951700
    7748 8dgf:B (2.9) BS01 ATP N/A GO:0016887 ... N/A 35951700
    7749 8dgf:C (2.9) BS01 ATP N/A GO:0016887 ... N/A 35951700
    7750 8dgf:D (2.9) BS01 ATP N/A GO:0016887 ... N/A 35951700
    7751 8dh5:B (2.85) BS04 ATP 2.7.7.6 GO:0000428 ... P00573 36635281
    7752 8dh5:E (2.85) BS04 ATP 2.7.7.6 GO:0000428 ... P00573 36635281
    7753 8dh5:I (2.85) BS04 ATP 2.7.7.6 GO:0000428 ... P00573 36635281
    7754 8dh5:M (2.85) BS04 ATP 2.7.7.6 GO:0000428 ... P00573 36635281
    7755 8dne:A (3.5) BS01 ATP ? GO:0005515 ... O67181 36064941
    7756 8dne:A (3.5) BS02 ATP ? GO:0005515 ... O67181 36064941
    7757 8dne:C (3.5) BS01 ATP ? GO:0005515 ... O67181 36064941
    7758 8dne:C (3.5) BS02 ATP ? GO:0005515 ... O67181 36064941
    7759 8dqh:A (1.52) BS01 ATP ? GO:0004812 ... A0A3G3IHP7 36395426
    7760 8dqh:D (1.52) BS01 ATP ? GO:0004812 ... A0A3G3IHP7 36395426
    7761 8dqi:A (1.54) BS01 ATP ? GO:0004812 ... A0A3G3IHP7 36395426
    7762 8dqi:D (1.54) BS01 ATP ? GO:0004812 ... A0A3G3IHP7 36395426
    7763 8dqj:D (1.54) BS01 ATP ? GO:0004812 ... A0A3G3IHP7 36395426
    7764 8drp:A (2.84) BS02 ATP ? GO:0003151 ... P11716 37224245
    7765 8drp:B (2.84) BS02 ATP ? GO:0003151 ... P11716 37224245
    7766 8drp:C (2.84) BS02 ATP ? GO:0003151 ... P11716 37224245
    7767 8drp:D (2.84) BS02 ATP ? GO:0003151 ... P11716 37224245
    7768 8dtb:A (3.14) BS02 ATP ? GO:0003151 ... P11716 37224245
    7769 8dtb:D (3.14) BS01 ATP ? GO:0003151 ... P11716 37224245
    7770 8dtb:G (3.14) BS01 ATP ? GO:0003151 ... P11716 37224245
    7771 8duj:A (3.7) BS03 ATP ? GO:0003151 ... P11716 37224245
    7772 8duj:D (3.7) BS03 ATP ? GO:0003151 ... P11716 37224245
    7773 8duj:G (3.7) BS03 ATP ? GO:0003151 ... P11716 37224245
    7774 8duj:J (3.7) BS03 ATP ? GO:0003151 ... P11716 37224245
    7775 8dve:A (3.84) BS03 ATP ? GO:0003151 ... P11716 37224245
    7776 8dve:D (3.84) BS03 ATP ? GO:0003151 ... P11716 37224245
    7777 8dve:G (3.84) BS03 ATP ? GO:0003151 ... P11716 37224245
    7778 8dve:J (3.84) BS03 ATP ? GO:0003151 ... P11716 37224245
    7779 8dyu:A (4.0) BS02 ATP ? GO:0005524 ... Q14204 36692009
    7780 8dyv:A (3.97) BS03 ATP ? GO:0005524 ... Q14204 36692009
    7781 8dzz:A (4.1) BS01 ATP ? GO:0005524 ... P36022 37620585
    7782 8dzz:A (4.1) BS02 ATP ? GO:0005524 ... P36022 37620585
    7783 8dzz:A (4.1) BS04 ATP ? GO:0005524 ... P36022 37620585
    7784 8dzz:D (4.1) BS01 ATP ? GO:0005524 ... P36022 37620585
    7785 8dzz:D (4.1) BS02 ATP ? GO:0005524 ... P36022 37620585
    7786 8dzz:D (4.1) BS04 ATP ? GO:0005524 ... P36022 37620585
    7787 8e00:A (3.6) BS01 ATP ? GO:0005524 ... P36022 37620585
    7788 8e00:A (3.6) BS02 ATP ? GO:0005524 ... P36022 37620585
    7789 8e00:A (3.6) BS04 ATP ? GO:0005524 ... P36022 37620585
    7790 8e1i:A (2.0) BS02 ATP 2.7.4.24 GO:0000829 ... O74429 36468882
    7791 8e2l:A (3.51) BS02 ATP ? GO:0003678 ... A0A4W6C5C5 36400570
    7792 8e2l:B (3.51) BS02 ATP ? GO:0003678 ... A0A4W6C5C5 36400570
    7793 8e2l:B (3.51) BS03 ATP ? GO:0003678 ... A0A4W6C5C5 36400570
    7794 8e2l:C (3.51) BS02 ATP ? GO:0003678 ... A0A4W6C5C5 36400570
    7795 8e2l:C (3.51) BS03 ATP ? GO:0003678 ... A0A4W6C5C5 36400570
    7796 8e2l:D (3.51) BS02 ATP ? GO:0003678 ... A0A4W6C5C5 36400570
    7797 8e2l:D (3.51) BS03 ATP ? GO:0003678 ... A0A4W6C5C5 36400570
    7798 8e2l:E (3.51) BS02 ATP ? GO:0003678 ... A0A4W6C5C5 36400570
    7799 8e2l:E (3.51) BS03 ATP ? GO:0003678 ... A0A4W6C5C5 36400570
    7800 8e2l:F (3.51) BS02 ATP ? GO:0003678 ... A0A4W6C5C5 36400570

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218