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BioLiP
Download all results in tab-seperated text for 9664 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    7201 8ape:C1 (3.7) BS01 ATP ? GO:0005524 ... Q9GS23 36220811
    7202 8ape:F1 (3.7) BS01 ATP 7.1.2.2 GO:0005524 ... Q9GPE9 36220811
    7203 8apf:A1 (4.3) BS01 ATP ? GO:0005524 ... Q9GS23 36220811
    7204 8apf:B1 (4.3) BS01 ATP ? GO:0005524 ... Q9GS23 36220811
    7205 8apf:C1 (4.3) BS01 ATP ? GO:0005524 ... Q9GS23 36220811
    7206 8apf:C1 (4.3) BS02 ATP ? GO:0005524 ... Q9GS23 36220811
    7207 8apf:D1 (4.3) BS01 ATP 7.1.2.2 GO:0005524 ... Q9GPE9 36220811
    7208 8apg:A1 (3.5) BS01 ATP ? GO:0005524 ... Q9GS23 36220811
    7209 8apg:B1 (3.5) BS01 ATP ? GO:0005524 ... Q9GS23 36220811
    7210 8apg:C1 (3.5) BS01 ATP ? GO:0005524 ... Q9GS23 36220811
    7211 8apg:C1 (3.5) BS03 ATP ? GO:0005524 ... Q9GS23 36220811
    7212 8apg:D1 (3.5) BS01 ATP 7.1.2.2 GO:0005524 ... Q9GPE9 36220811
    7213 8aph:A1 (3.8) BS01 ATP ? GO:0005524 ... Q9GS23 36220811
    7214 8aph:B1 (3.8) BS01 ATP ? GO:0005524 ... Q9GS23 36220811
    7215 8aph:C1 (3.8) BS01 ATP ? GO:0005524 ... Q9GS23 36220811
    7216 8aph:C1 (3.8) BS02 ATP ? GO:0005524 ... Q9GS23 36220811
    7217 8aph:D1 (3.8) BS01 ATP 7.1.2.2 GO:0005524 ... Q9GPE9 36220811
    7218 8apj:A1 (3.8) BS01 ATP ? GO:0005524 ... Q9GS23 36220811
    7219 8apj:B1 (3.8) BS01 ATP ? GO:0005524 ... Q9GS23 36220811
    7220 8apj:C1 (3.8) BS01 ATP ? GO:0005524 ... Q9GS23 36220811
    7221 8apj:C1 (3.8) BS02 ATP ? GO:0005524 ... Q9GS23 36220811
    7222 8apj:D1 (3.8) BS01 ATP 7.1.2.2 GO:0005524 ... Q9GPE9 36220811
    7223 8apk:A1 (3.7) BS01 ATP ? GO:0005524 ... Q9GS23 36220811
    7224 8apk:A1 (3.7) BS03 ATP ? GO:0005524 ... Q9GS23 36220811
    7225 8apk:B1 (3.7) BS01 ATP ? GO:0005524 ... Q9GS23 36220811
    7226 8apk:C1 (3.7) BS01 ATP ? GO:0005524 ... Q9GS23 36220811
    7227 8apk:E1 (3.7) BS01 ATP 7.1.2.2 GO:0005524 ... Q9GPE9 36220811
    7228 8apn:Bw (3.1) BS03 ATP N/A N/A N/A 36253367
    7229 8apo:Bw (3.2) BS03 ATP N/A N/A N/A 36253367
    7230 8av6:J (4.68) BS02 ATP ? N/A G0S589 36490333
    7231 8avy:A (2.9) BS01 ATP 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    7232 8avy:A (2.9) BS03 ATP 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    7233 8azg:M (2.29) BS01 ATP ? GO:0000902 ... A0A150MJ77 37818717
    7234 8b6h:DB (2.6) BS03 ATP 7.1.1.9 GO:0004129 ... Q950Y9 36949187
    7235 8b6h:DF (2.6) BS01 ATP ? N/A Q24I72 36949187
    7236 8b6h:Db (2.6) BS02 ATP 7.1.1.9 GO:0004129 ... Q950Y9 36949187
    7237 8b6h:ER (2.6) BS01 ATP ? N/A I7M9E7 36949187
    7238 8b6h:Er (2.6) BS01 ATP ? N/A I7M9E7 36949187
    7239 8bd4:A (3.44) BS01 ATP ? N/A A0A8J0PCL3 36435179
    7240 8bd4:B (3.44) BS01 ATP ? N/A A0A8J0PCL3 36435179
    7241 8bd4:C (3.44) BS01 ATP ? N/A A0A8J0PCL3 36435179
    7242 8bd4:D (3.44) BS01 ATP ? N/A A0A8J0PCL3 36435179
    7243 8bd4:E (3.44) BS01 ATP ? N/A A0A8J0PCL3 36435179
    7244 8bd4:F (3.44) BS02 ATP ? N/A A0A8J0PCL3 36435179
    7245 8bd4:G (3.44) BS02 ATP ? N/A A0A8J0PCL3 36435179
    7246 8bd5:E (3.3) BS02 ATP ? N/A A0A8J0PCL3 36435179
    7247 8bd5:F (3.3) BS01 ATP ? N/A A0A8J0PCL3 36435179
    7248 8bd5:G (3.3) BS01 ATP ? N/A A0A8J0PCL3 36435179
    7249 8bd5:H (3.3) BS02 ATP ? N/A A0A8J0PCL3 36435179
    7250 8bd5:I (3.3) BS02 ATP ? N/A A0A8J0PCL3 36435179
    7251 8bd5:J (3.3) BS01 ATP ? N/A A0A8J0PCL3 36435179
    7252 8bd5:K (3.3) BS01 ATP ? N/A A0A8J0PCL3 36435179
    7253 8bd6:R (4.1) BS02 ATP ? N/A A0A8J0PCL3 36435179
    7254 8bd6:S (4.1) BS01 ATP ? N/A A0A8J0PCL3 36435179
    7255 8bd6:T (4.1) BS01 ATP ? N/A A0A8J0PCL3 36435179
    7256 8bd6:T (4.1) BS02 ATP ? N/A A0A8J0PCL3 36435179
    7257 8bd6:U (4.1) BS01 ATP ? N/A A0A8J0PCL3 36435179
    7258 8bd6:V (4.1) BS01 ATP ? N/A A0A8J0PCL3 36435179
    7259 8bd6:W (4.1) BS01 ATP ? N/A A0A8J0PCL3 36435179
    7260 8bd6:X (4.1) BS02 ATP ? N/A A0A8J0PCL3 36435179
    7261 8bd6:Y (4.1) BS01 ATP ? N/A A0A8J0PCL3 36435179
    7262 8bd6:Z (4.1) BS01 ATP ? N/A A0A8J0PCL3 36435179
    7263 8bht:A (3.1) BS01 ATP 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    7264 8bht:B (3.1) BS01 ATP 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    7265 8bi0:A (3.2) BS01 ATP 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    7266 8bi0:B (3.2) BS01 ATP 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    7267 8bjj:A (1.699) BS01 ATP 3.6.4.- GO:0000287 ... P68135 37747912
    7268 8bkz:A (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7269 8bkz:BA (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7270 8bkz:C (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7271 8bkz:E (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7272 8bkz:G (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7273 8bkz:I (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7274 8bkz:K (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7275 8bkz:M (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7276 8bkz:O (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7277 8bkz:Q (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7278 8bkz:S (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7279 8bkz:V (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7280 8bkz:X (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7281 8bkz:Z (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7282 8bl2:A (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7283 8bl2:B (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7284 8bl2:C (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7285 8bl2:D (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7286 8bl2:E (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7287 8bl2:F (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7288 8bl2:G (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7289 8bl2:H (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7290 8bl2:I (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7291 8bl2:J (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7292 8bl2:K (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7293 8bl2:L (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7294 8bl2:M (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7295 8bl2:N (2.3) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7296 8bl7:A (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7297 8bl7:B (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7298 8bl7:C (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7299 8bl7:D (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7300 8bl7:E (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7301 8bl7:F (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7302 8bl7:G (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7303 8bl7:H (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7304 8bl7:I (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7305 8bl7:J (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7306 8bl7:K (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7307 8bl7:L (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7308 8bl7:M (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7309 8bl7:N (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7310 8blc:A (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7311 8blc:B (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7312 8blc:C (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7313 8blc:D (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7314 8blc:E (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7315 8blc:F (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7316 8blc:G (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7317 8blc:H (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7318 8blc:I (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7319 8blc:J (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7320 8blc:K (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7321 8blc:L (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7322 8blc:M (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7323 8blc:N (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7324 8bld:A (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7325 8bld:B (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7326 8bld:C (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7327 8bld:D (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7328 8bld:E (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7329 8bld:F (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7330 8bld:G (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7331 8bld:H (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7332 8bld:I (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7333 8bld:J (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7334 8bld:K (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7335 8bld:L (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7336 8bld:M (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7337 8bld:N (4.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7338 8ble:A (4.0) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7339 8ble:B (4.0) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7340 8ble:C (4.0) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7341 8ble:D (4.0) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7342 8ble:E (4.0) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7343 8ble:F (4.0) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7344 8ble:G (4.0) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7345 8ble:H (4.0) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7346 8ble:I (4.0) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7347 8ble:J (4.0) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7348 8ble:K (4.0) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7349 8ble:L (4.0) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7350 8ble:M (4.0) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7351 8ble:N (4.0) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7352 8blf:A (3.9) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7353 8blf:B (3.9) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7354 8blf:C (3.9) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7355 8blf:D (3.9) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7356 8blf:E (3.9) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7357 8blf:F (3.9) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7358 8blf:G (3.9) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7359 8blf:H (3.9) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7360 8blf:I (3.9) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7361 8blf:J (3.9) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7362 8blf:K (3.9) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7363 8blf:L (3.9) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7364 8blf:M (3.9) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7365 8blf:N (3.9) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7366 8bly:A (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7367 8bly:B (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7368 8bly:C (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7369 8bly:D (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7370 8bly:E (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7371 8bly:F (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7372 8bly:G (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7373 8bly:H (3.2) BS02 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7374 8bly:I (3.2) BS02 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7375 8bly:J (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7376 8bly:K (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7377 8bly:L (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7378 8bly:M (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7379 8bly:N (3.2) BS02 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7380 8bm0:A (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7381 8bm0:C (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7382 8bm0:D (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7383 8bm0:F (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7384 8bm0:G (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7385 8bm0:H (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7386 8bm0:I (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7387 8bm0:K (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7388 8bm0:L (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7389 8bm0:N (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7390 8bm0:O (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7391 8bm0:Q (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7392 8bm0:R (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7393 8bm0:T (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7394 8bm1:A (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7395 8bm1:C (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7396 8bm1:D (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7397 8bm1:F (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7398 8bm1:G (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7399 8bm1:H (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    7400 8bm1:I (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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