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BioLiP
Download all results in tab-seperated text for 9664 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    5001 7ftu:A (1.65) BS04 ATP 2.7.7.86 N/A Q8N884 N/A
    5002 7fui:A (1.74) BS04 ATP 2.7.7.86 N/A Q8N884 N/A
    5003 7fuj:A (1.79) BS04 ATP 2.7.7.86 N/A Q8N884 N/A
    5004 7fur:A (1.7) BS04 ATP 2.7.7.86 N/A Q8N884 N/A
    5005 7gqt:A (2.21) BS02 ATP 3.1.-.-
    5.6.2.4
    GO:0003676 ... Q14191 38658751
    5006 7jg5:A (3.4) BS01 ATP 7.1.2.2 GO:0005524 ... A0R202 33299175
    5007 7jg5:B (3.4) BS01 ATP 7.1.2.2 GO:0005524 ... A0R202 33299175
    5008 7jg5:C (3.4) BS01 ATP 7.1.2.2 GO:0005524 ... A0R202 33299175
    5009 7jga:A (3.2) BS01 ATP 7.1.2.2 GO:0005524 ... A0R202 33299175
    5010 7jga:B (3.2) BS01 ATP 7.1.2.2 GO:0005524 ... A0R202 33299175
    5011 7jga:C (3.2) BS01 ATP 7.1.2.2 GO:0005524 ... A0R202 33299175
    5012 7jgr:A (3.9) BS01 ATP ? GO:0005524 ... O16810 32848132
    5013 7jgr:D (3.9) BS02 ATP ? GO:0000808 ... Q9W102 32848132
    5014 7jgr:E (3.9) BS01 ATP ? GO:0000808 ... Q24169 32848132
    5015 7jgr:G (3.9) BS02 ATP ? GO:0006270 ... Q9VSM9 32848132
    5016 7jgs:A (3.2) BS02 ATP ? GO:0005524 ... O16810 32848132
    5017 7jgs:D (3.2) BS02 ATP ? GO:0000808 ... Q9W102 32848132
    5018 7jgs:E (3.2) BS01 ATP ? GO:0000808 ... Q24169 32848132
    5019 7jgs:G (3.2) BS02 ATP ? GO:0006270 ... Q9VSM9 32848132
    5020 7jhg:G (3.47) BS01 ATP ? GO:0004672 ... P54619 34437114
    5021 7jhh:G (3.92) BS01 ATP ? GO:0004672 ... P54619 34437114
    5022 7jij:G (5.5) BS01 ATP ? GO:0004672 ... P54619 34437114
    5023 7jk2:A (3.2) BS01 ATP ? GO:0005524 ... O16810 32848132
    5024 7jk2:D (3.2) BS01 ATP ? GO:0000808 ... Q9W102 32848132
    5025 7jk2:E (3.2) BS01 ATP ? GO:0000808 ... Q24169 32848132
    5026 7jk2:G (3.2) BS02 ATP ? GO:0006270 ... Q9VSM9 32848132
    5027 7jk3:A (3.4) BS02 ATP ? GO:0005524 ... O16810 32848132
    5028 7jk3:D (3.4) BS02 ATP ? GO:0000808 ... Q9W102 32848132
    5029 7jk3:E (3.4) BS01 ATP ? GO:0000808 ... Q24169 32848132
    5030 7jk3:G (3.4) BS01 ATP ? GO:0006270 ... Q9VSM9 32848132
    5031 7jk4:A (3.4) BS02 ATP ? GO:0005524 ... O16810 32848132
    5032 7jk4:D (3.4) BS02 ATP ? GO:0000808 ... Q9W102 32848132
    5033 7jk4:E (3.4) BS01 ATP ? GO:0000808 ... Q24169 32848132
    5034 7jk4:G (3.4) BS02 ATP ? GO:0006270 ... Q9VSM9 32848132
    5035 7jk5:A (3.9) BS02 ATP ? GO:0005524 ... O16810 32848132
    5036 7jk5:D (3.9) BS02 ATP ? GO:0000808 ... Q9W102 32848132
    5037 7jk5:E (3.9) BS01 ATP ? GO:0000808 ... Q24169 32848132
    5038 7jk6:A (4.0) BS01 ATP ? GO:0005524 ... O16810 32848132
    5039 7jk6:D (4.0) BS01 ATP ? GO:0000808 ... Q9W102 32848132
    5040 7jk6:E (4.0) BS01 ATP ? GO:0000808 ... Q24169 32848132
    5041 7jlv:A (3.8) BS01 ATP 3.2.2.-
    3.2.2.6
    GO:0003953 ... A0A290U7C4 33273074
    5042 7jlv:B (3.8) BS01 ATP 3.2.2.-
    3.2.2.6
    GO:0003953 ... A0A290U7C4 33273074
    5043 7jlv:D (3.8) BS01 ATP 3.2.2.-
    3.2.2.6
    GO:0003953 ... A0A290U7C4 33273074
    5044 7jlv:G (3.8) BS01 ATP 3.2.2.-
    3.2.2.6
    GO:0003953 ... A0A290U7C4 33273074
    5045 7jm6:A (2.92) BS01 ATP ? GO:0005247 ... Q5ZL60 32749217
    5046 7jm6:B (2.92) BS01 ATP ? GO:0005247 ... Q5ZL60 32749217
    5047 7jm7:A (2.82) BS01 ATP ? GO:0005247 ... P51798 32749217
    5048 7jm7:C (2.82) BS01 ATP ? GO:0005247 ... P51798 32749217
    5049 7jpn:A (3.24) BS01 ATP ? GO:0003779 ... P61157 35110533
    5050 7jpn:B (3.24) BS01 ATP ? GO:0003779 ... A7MB62 35110533
    5051 7jpo:A (3.2) BS01 ATP ? GO:0005524 ... Q13415 32808929
    5052 7jpo:D (3.2) BS01 ATP ? GO:0000166 ... O43929 32808929
    5053 7jpo:E (3.2) BS01 ATP ? GO:0000166 ... O43913 32808929
    5054 7jpp:D (3.7) BS01 ATP ? GO:0000166 ... O43929 32808929
    5055 7jpp:E (3.7) BS01 ATP ? GO:0000166 ... O43913 32808929
    5056 7jpq:D (3.5) BS01 ATP ? GO:0000166 ... O43929 32808929
    5057 7jpq:E (3.5) BS01 ATP ? GO:0000166 ... O43913 32808929
    5058 7jpr:A (4.0) BS01 ATP ? GO:0005524 ... Q13415 32808929
    5059 7jpr:D (4.0) BS01 ATP ? GO:0000166 ... O43929 32808929
    5060 7jpr:E (4.0) BS01 ATP ? GO:0000166 ... O43913 32808929
    5061 7jps:A (4.4) BS02 ATP ? GO:0005524 ... Q13415 32808929
    5062 7jps:D (4.4) BS01 ATP ? GO:0000166 ... O43929 32808929
    5063 7jps:E (4.4) BS01 ATP ? GO:0000166 ... O43913 32808929
    5064 7ju4:u (3.4) BS01 ATP 3.6.4.- GO:0005524 ... P53498 33318703
    5065 7k2t:A (3.6) BS01 ATP ? GO:0005515 ... O67181 33443152
    5066 7k2t:A (3.6) BS02 ATP ? GO:0005515 ... O67181 33443152
    5067 7k2t:C (3.6) BS01 ATP ? GO:0005515 ... O67181 33443152
    5068 7k2t:C (3.6) BS02 ATP ? GO:0005515 ... O67181 33443152
    5069 7k3z:A (3.69) BS01 ATP ? GO:0005524 ... Q8I0V3 33723304
    5070 7k3z:B (3.69) BS01 ATP ? GO:0005524 ... Q8I0V3 33723304
    5071 7k3z:C (3.69) BS01 ATP ? GO:0005524 ... Q8I0V3 33723304
    5072 7k3z:D (3.69) BS01 ATP ? GO:0005524 ... Q8I0V3 33723304
    5073 7k3z:E (3.69) BS02 ATP ? GO:0005524 ... Q8I0V3 33723304
    5074 7k3z:F (3.69) BS01 ATP ? GO:0005524 ... Q8I0V3 33723304
    5075 7k3z:G (3.69) BS01 ATP ? GO:0005524 ... Q8I0V3 33723304
    5076 7k58:A (4.0) BS02 ATP ? GO:0005524 ... Q22A67 34556869
    5077 7k58:B (4.0) BS01 ATP ? GO:0005524 ... I7M9J2 34556869
    5078 7k58:C (4.0) BS01 ATP N/A GO:0005524 ... N/A 34556869
    5079 7k5b:A (4.5) BS02 ATP ? GO:0005524 ... Q22A67 34556869
    5080 7k5b:B (4.5) BS02 ATP ? GO:0005524 ... I7M9J2 34556869
    5081 7k5b:C (4.5) BS01 ATP N/A GO:0005524 ... N/A 34556869
    5082 7kek:A (8.0) BS02 ATP ? GO:0005524 ... Q22A67 34556869
    5083 7kek:B (8.0) BS01 ATP ? GO:0005524 ... I7M9J2 34556869
    5084 7kek:C (8.0) BS01 ATP ? GO:0005524 ... I7M6H4 34556869
    5085 7kl1:A (2.4) BS04 ATP 2.7.11.17 GO:0004672 ... Q9UQM7 35830796
    5086 7kl1:B (2.4) BS04 ATP 2.7.11.17 GO:0004672 ... Q9UQM7 35830796
    5087 7ko2:A (2.64) BS01 ATP ? GO:0005515 ... P0A6Y8 34453889
    5088 7ko2:B (2.64) BS01 ATP ? GO:0005515 ... P0A6Y8 34453889
    5089 7ko2:C (2.64) BS01 ATP ? GO:0005515 ... P0A6Y8 34453889
    5090 7ko2:D (2.64) BS01 ATP ? GO:0005515 ... P0A6Y8 34453889
    5091 7krj:A (2.56) BS01 ATP 3.6.4.10 GO:0001764 ... P07900 34937936
    5092 7krj:B (2.56) BS01 ATP 3.6.4.10 GO:0001764 ... P07900 34937936
    5093 7krt:A (2.79) BS01 ATP ? GO:0005515 ... P0A6Y8 34453889
    5094 7krt:B (2.79) BS01 ATP ? GO:0005515 ... P0A6Y8 34453889
    5095 7krt:C (2.79) BS01 ATP ? GO:0005515 ... P0A6Y8 34453889
    5096 7krt:D (2.79) BS01 ATP ? GO:0005515 ... P0A6Y8 34453889
    5097 7kru:A (1.82) BS02 ATP ? GO:0005524 ... P0A6Y8 34453889
    5098 7kru:B (1.82) BS01 ATP ? GO:0005524 ... P0A6Y8 34453889
    5099 7krv:A (1.92) BS01 ATP ? GO:0005524 ... P0A6Y8 34453889
    5100 7krv:B (1.92) BS01 ATP ? GO:0005524 ... P0A6Y8 34453889
    5101 7krw:A (7.7) BS01 ATP ? GO:0005515 ... P0A6Y8 34453889
    5102 7krw:B (7.7) BS01 ATP ? GO:0005515 ... P0A6Y8 34453889
    5103 7krw:C (7.7) BS01 ATP ? GO:0005515 ... P0A6Y8 34453889
    5104 7krw:D (7.7) BS01 ATP ? GO:0005515 ... P0A6Y8 34453889
    5105 7krz:A (3.2) BS02 ATP 3.4.21.53 GO:0004176 ... P36776 34050165
    5106 7krz:B (3.2) BS01 ATP 3.4.21.53 GO:0004176 ... P36776 34050165
    5107 7krz:B (3.2) BS02 ATP 3.4.21.53 GO:0004176 ... P36776 34050165
    5108 7krz:C (3.2) BS02 ATP 3.4.21.53 GO:0004176 ... P36776 34050165
    5109 7krz:D (3.2) BS01 ATP 3.4.21.53 GO:0004176 ... P36776 34050165
    5110 7krz:D (3.2) BS02 ATP 3.4.21.53 GO:0004176 ... P36776 34050165
    5111 7ksm:A (3.2) BS01 ATP 3.4.21.53 GO:0004176 ... P36776 34050165
    5112 7ksm:B (3.2) BS02 ATP 3.4.21.53 GO:0004176 ... P36776 34050165
    5113 7ksm:C (3.2) BS01 ATP 3.4.21.53 GO:0004176 ... P36776 34050165
    5114 7ksm:C (3.2) BS02 ATP 3.4.21.53 GO:0004176 ... P36776 34050165
    5115 7ksm:D (3.2) BS01 ATP 3.4.21.53 GO:0004176 ... P36776 34050165
    5116 7ksm:D (3.2) BS02 ATP 3.4.21.53 GO:0004176 ... P36776 34050165
    5117 7ksm:E (3.2) BS01 ATP 3.4.21.53 GO:0004176 ... P36776 34050165
    5118 7kzi:A (2.82) BS01 ATP ? GO:0005515 ... P0A6Y8 N/A
    5119 7kzi:B (2.82) BS01 ATP ? GO:0005515 ... P0A6Y8 N/A
    5120 7kzu:A (2.15) BS01 ATP ? GO:0005524 ... P0A6Y8 N/A
    5121 7l1q:A (3.4) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 34344897
    5122 7l1q:B (3.4) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 34344897
    5123 7l1q:B (3.4) BS02 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 34344897
    5124 7l1q:C (3.4) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 34344897
    5125 7l1q:E (3.4) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 34344897
    5126 7l1q:F (3.4) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 34344897
    5127 7l1r:A (3.1) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 34344897
    5128 7l1r:B (3.1) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 34344897
    5129 7l1r:C (3.1) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 34344897
    5130 7l1r:D (3.1) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 34344897
    5131 7l1r:F (3.1) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 34344897
    5132 7l1s:A (3.6) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 34344897
    5133 7l1s:B (3.6) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 34344897
    5134 7l1s:C (3.6) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 34344897
    5135 7l1s:C (3.6) BS02 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 34344897
    5136 7l1s:D (3.6) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 34344897
    5137 7l1s:F (3.6) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 34344897
    5138 7lg5:A (2.63) BS01 ATP 6.3.2.29
    6.3.2.30
    GO:0005524 ... A0A068N621 34385683
    5139 7lg5:A (2.63) BS02 ATP 6.3.2.29
    6.3.2.30
    GO:0005524 ... A0A068N621 34385683
    5140 7lg5:B (2.63) BS01 ATP 6.3.2.29
    6.3.2.30
    GO:0005524 ... A0A068N621 34385683
    5141 7lg5:B (2.63) BS02 ATP 6.3.2.29
    6.3.2.30
    GO:0005524 ... A0A068N621 34385683
    5142 7lg5:C (2.63) BS01 ATP 6.3.2.29
    6.3.2.30
    GO:0005524 ... A0A068N621 34385683
    5143 7lg5:C (2.63) BS02 ATP 6.3.2.29
    6.3.2.30
    GO:0005524 ... A0A068N621 34385683
    5144 7lg5:D (2.63) BS01 ATP 6.3.2.29
    6.3.2.30
    GO:0005524 ... A0A068N621 34385683
    5145 7lg5:D (2.63) BS02 ATP 6.3.2.29
    6.3.2.30
    GO:0005524 ... A0A068N621 34385683
    5146 7lgm:A (4.4) BS01 ATP 6.3.2.29
    6.3.2.30
    GO:0005524 ... Q6FCQ7 34385683
    5147 7lgm:B (4.4) BS01 ATP 6.3.2.29
    6.3.2.30
    GO:0005524 ... Q6FCQ7 34385683
    5148 7lgq:A (2.7) BS03 ATP 6.3.2.29
    6.3.2.30
    GO:0005524 ... A0A068N621 34385683
    5149 7lgq:A (2.7) BS04 ATP 6.3.2.29
    6.3.2.30
    GO:0005524 ... A0A068N621 34385683
    5150 7lgq:B (2.7) BS03 ATP 6.3.2.29
    6.3.2.30
    GO:0005524 ... A0A068N621 34385683
    5151 7lgq:B (2.7) BS04 ATP 6.3.2.29
    6.3.2.30
    GO:0005524 ... A0A068N621 34385683
    5152 7lgq:C (2.7) BS03 ATP 6.3.2.29
    6.3.2.30
    GO:0005524 ... A0A068N621 34385683
    5153 7lgq:C (2.7) BS04 ATP 6.3.2.29
    6.3.2.30
    GO:0005524 ... A0A068N621 34385683
    5154 7lgq:D (2.7) BS03 ATP 6.3.2.29
    6.3.2.30
    GO:0005524 ... A0A068N621 34385683
    5155 7lgq:D (2.7) BS04 ATP 6.3.2.29
    6.3.2.30
    GO:0005524 ... A0A068N621 34385683
    5156 7lht:A (3.5) BS02 ATP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 34107286
    5157 7lht:B (3.5) BS02 ATP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 34107286
    5158 7lhw:A (3.7) BS02 ATP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 34107286
    5159 7li3:A (3.8) BS02 ATP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 34107286
    5160 7li4:A (3.1) BS02 ATP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 34107286
    5161 7lj1:G (2.97) BS01 ATP 1.11.1.24 GO:0000302 ... Q06830 34208049
    5162 7lj1:c (2.97) BS01 ATP 1.8.98.2 GO:0032542 ... Q9BYN0 34208049
    5163 7lj1:g (2.97) BS01 ATP 1.8.98.2 GO:0032542 ... Q9BYN0 34208049
    5164 7ljf:A (4.0) BS01 ATP ? GO:0000502 ... P9WQN5 N/A
    5165 7ljl:A (1.45) BS04 ATP 2.7.7.- GO:0005524 ... P0DSP4 34077735
    5166 7ljl:A (1.45) BS05 ATP 2.7.7.- GO:0005524 ... P0DSP4 34077735
    5167 7ljl:B (1.45) BS04 ATP 2.7.7.- GO:0005524 ... P0DSP4 34077735
    5168 7ljl:B (1.45) BS05 ATP 2.7.7.- GO:0005524 ... P0DSP4 34077735
    5169 7lkz:A (3.27) BS05 ATP 7.6.2.1 GO:0001523 ... P78363 33605212
    5170 7lkz:A (3.27) BS06 ATP 7.6.2.1 GO:0001523 ... P78363 33605212
    5171 7lmy:A (2.4) BS01 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5172 7lmy:A (2.4) BS02 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5173 7lmy:B (2.4) BS01 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5174 7lmy:B (2.4) BS02 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5175 7lmy:C (2.4) BS01 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5176 7lmy:C (2.4) BS02 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5177 7lmy:D (2.4) BS01 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5178 7lmy:D (2.4) BS02 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5179 7lmy:E (2.4) BS01 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5180 7lmy:E (2.4) BS02 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5181 7lmy:F (2.4) BS01 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5182 7lmy:F (2.4) BS02 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5183 7lmz:A (3.06) BS03 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5184 7lmz:B (3.06) BS02 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5185 7lmz:B (3.06) BS04 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5186 7lmz:B (3.06) BS05 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5187 7lmz:C (3.06) BS02 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5188 7lmz:C (3.06) BS03 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5189 7lmz:C (3.06) BS04 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5190 7lmz:C (3.06) BS05 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5191 7lmz:D (3.06) BS02 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5192 7lmz:D (3.06) BS03 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5193 7lmz:D (3.06) BS05 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5194 7lmz:D (3.06) BS06 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5195 7lmz:E (3.06) BS02 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5196 7lmz:E (3.06) BS03 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5197 7lmz:F (3.06) BS02 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5198 7ln0:A (2.98) BS03 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5199 7ln0:B (2.98) BS02 ATP 3.6.4.6 GO:0000502 ... P55072 34262183
    5200 7ln0:B (2.98) BS05 ATP 3.6.4.6 GO:0000502 ... P55072 34262183

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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