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BioLiP
Download all results in tab-seperated text for 2564 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1401 7nku:C (3.4) BS01 AGS 3.6.4.10 GO:0005515 ... P32794 34108481
    1402 7nku:C (3.4) BS02 AGS 3.6.4.10 GO:0005515 ... P32794 34108481
    1403 7nku:D (3.4) BS01 AGS 3.6.4.10 GO:0005515 ... P32794 34108481
    1404 7nku:D (3.4) BS02 AGS 3.6.4.10 GO:0005515 ... P32794 34108481
    1405 7nku:E (3.4) BS01 AGS 3.6.4.10 GO:0005515 ... P32794 34108481
    1406 7nku:E (3.4) BS02 AGS 3.6.4.10 GO:0005515 ... P32794 34108481
    1407 7nku:F (3.4) BS02 AGS 3.6.4.10 GO:0005515 ... P32794 34108481
    1408 7nku:F (3.4) BS03 AGS 3.6.4.10 GO:0005515 ... P32794 34108481
    1409 7npf:A (4.5) BS01 AGS ? GO:0000166 ... Q9KKJ2 34453062
    1410 7npf:A (4.5) BS02 AGS ? GO:0000166 ... Q9KKJ2 34453062
    1411 7npf:B (4.5) BS02 AGS ? GO:0000166 ... Q9KKJ2 34453062
    1412 7npf:B (4.5) BS04 AGS ? GO:0000166 ... Q9KKJ2 34453062
    1413 7npf:C (4.5) BS02 AGS ? GO:0000166 ... Q9KKJ2 34453062
    1414 7npf:C (4.5) BS03 AGS ? GO:0000166 ... Q9KKJ2 34453062
    1415 7npf:D (4.5) BS02 AGS ? GO:0000166 ... Q9KKJ2 34453062
    1416 7npf:D (4.5) BS04 AGS ? GO:0000166 ... Q9KKJ2 34453062
    1417 7npf:E (4.5) BS02 AGS ? GO:0000166 ... Q9KKJ2 34453062
    1418 7npf:E (4.5) BS03 AGS ? GO:0000166 ... Q9KKJ2 34453062
    1419 7npf:F (4.5) BS03 AGS ? GO:0000166 ... Q9KKJ2 34453062
    1420 7npf:F (4.5) BS05 AGS ? GO:0000166 ... Q9KKJ2 34453062
    1421 7npf:G (4.5) BS02 AGS ? GO:0000166 ... Q9KKJ2 34453062
    1422 7npf:G (4.5) BS03 AGS ? GO:0000166 ... Q9KKJ2 34453062
    1423 7npf:H (4.5) BS03 AGS ? GO:0000166 ... Q9KKJ2 34453062
    1424 7npf:H (4.5) BS05 AGS ? GO:0000166 ... Q9KKJ2 34453062
    1425 7oim:A (4.0) BS05 AGS 2.3.2.-
    2.3.2.27
    3.6.4.-    		 GO:0001525 ... E9Q555 N/A
    1426 7otp:A (3.4) BS01 AGS 2.7.11.1 GO:0000460 ... P78527 34987222
    1427 7pbl:A (3.2) BS01 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1428 7pbl:B (3.2) BS02 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1429 7pbl:C (3.2) BS01 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1430 7pbm:A (3.2) BS02 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1431 7pbm:B (3.2) BS02 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1432 7pbm:C (3.2) BS01 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1433 7pbn:B (3.2) BS02 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1434 7pbn:C (3.2) BS01 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1435 7pbo:B (2.9) BS02 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1436 7pbo:C (2.9) BS01 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1437 7pbp:B (3.2) BS02 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1438 7pbp:C (3.2) BS01 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1439 7pbp:D (3.2) BS01 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1440 7pbq:A (3.1) BS01 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1441 7pbq:B (3.1) BS01 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1442 7pbq:C (3.1) BS01 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1443 7pbq:D (3.1) BS01 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1444 7pbr:A (3.0) BS01 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1445 7pbr:B (3.0) BS02 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1446 7pbr:C (3.0) BS01 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1447 7pbr:D (3.0) BS01 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1448 7pbs:A (3.3) BS02 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1449 7pbs:B (3.3) BS02 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1450 7pbs:C (3.3) BS02 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1451 7pbs:D (3.3) BS02 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1452 7pbs:F (3.3) BS01 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1453 7pbt:A (3.3) BS01 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1454 7pbt:B (3.3) BS02 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1455 7pbt:C (3.3) BS02 AGS 3.6.4.12 GO:0000400 ... Q5M2B1 36002576
    1456 7pds:A (3.14) BS01 AGS ? N/A Q8VLX1 35871290
    1457 7pds:B (3.14) BS02 AGS ? N/A Q8VLX1 35871290
    1458 7pds:B (3.14) BS03 AGS ? N/A Q8VLX1 35871290
    1459 7pds:C (3.14) BS02 AGS ? N/A Q8VLX1 35871290
    1460 7pds:C (3.14) BS03 AGS ? N/A Q8VLX1 35871290
    1461 7pds:D (3.14) BS02 AGS ? N/A Q8VLX1 35871290
    1462 7pds:D (3.14) BS03 AGS ? N/A Q8VLX1 35871290
    1463 7pds:E (3.14) BS02 AGS ? N/A Q8VLX1 35871290
    1464 7pds:E (3.14) BS03 AGS ? N/A Q8VLX1 35871290
    1465 7pds:F (3.14) BS01 AGS ? N/A Q8VLX1 35871290
    1466 7pds:F (3.14) BS02 AGS ? N/A Q8VLX1 35871290
    1467 7pt6:2 (3.2) BS01 AGS 3.6.4.12 GO:0000727 ... P29469 35614055
    1468 7pt6:2 (3.2) BS03 AGS 3.6.4.12 GO:0000727 ... P29469 35614055
    1469 7pt6:2 (3.2) BS04 AGS 3.6.4.12 GO:0000727 ... P29469 35614055
    1470 7pt6:4 (3.2) BS01 AGS 3.6.4.12 GO:0000727 ... P30665 35614055
    1471 7pt6:4 (3.2) BS03 AGS 3.6.4.12 GO:0000727 ... P30665 35614055
    1472 7pt6:5 (3.2) BS02 AGS 3.6.4.12 GO:0000727 ... P29496 35614055
    1473 7pt6:6 (3.2) BS01 AGS 3.6.4.12 GO:0000727 ... P53091 35614055
    1474 7pt6:6 (3.2) BS02 AGS 3.6.4.12 GO:0000727 ... P53091 35614055
    1475 7pt6:6 (3.2) BS03 AGS 3.6.4.12 GO:0000727 ... P53091 35614055
    1476 7pt6:7 (3.2) BS01 AGS 3.6.4.12 GO:0000727 ... P38132 35614055
    1477 7pt6:8 (3.2) BS02 AGS 2.7.11.1 GO:0000727 ... P06243 35614055
    1478 7pt6:B (3.2) BS01 AGS 3.6.4.12 GO:0000727 ... P29469 35614055
    1479 7pt6:B (3.2) BS03 AGS 3.6.4.12 GO:0000727 ... P29469 35614055
    1480 7pt6:B (3.2) BS04 AGS 3.6.4.12 GO:0000727 ... P29469 35614055
    1481 7pt6:D (3.2) BS01 AGS 3.6.4.12 GO:0000727 ... P30665 35614055
    1482 7pt6:D (3.2) BS03 AGS 3.6.4.12 GO:0000727 ... P30665 35614055
    1483 7pt6:E (3.2) BS02 AGS 3.6.4.12 GO:0000727 ... P29496 35614055
    1484 7pt6:F (3.2) BS01 AGS 3.6.4.12 GO:0000727 ... P53091 35614055
    1485 7pt6:F (3.2) BS02 AGS 3.6.4.12 GO:0000727 ... P53091 35614055
    1486 7pt6:F (3.2) BS03 AGS 3.6.4.12 GO:0000727 ... P53091 35614055
    1487 7pt6:G (3.2) BS01 AGS 3.6.4.12 GO:0000727 ... P38132 35614055
    1488 7pt6:H (3.2) BS02 AGS 2.7.11.1 GO:0000727 ... P06243 35614055
    1489 7r7s:A (4.23) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34360842
    1490 7r7s:A (4.23) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34360842
    1491 7r7s:B (4.23) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34360842
    1492 7r7s:B (4.23) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34360842
    1493 7r7s:C (4.23) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34360842
    1494 7r7s:C (4.23) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34360842
    1495 7r7s:D (4.23) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34360842
    1496 7r7s:D (4.23) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34360842
    1497 7r7s:E (4.23) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34360842
    1498 7r7s:E (4.23) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34360842
    1499 7r7s:F (4.23) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34360842
    1500 7r7s:F (4.23) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34360842
    1501 7rl7:A (3.0) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1502 7rl7:A (3.0) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1503 7rl7:A (3.0) BS05 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1504 7rl7:B (3.0) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1505 7rl7:B (3.0) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1506 7rl7:C (3.0) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1507 7rl7:C (3.0) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1508 7rl7:C (3.0) BS05 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1509 7rl7:D (3.0) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1510 7rl7:D (3.0) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1511 7rl7:D (3.0) BS05 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1512 7rl7:E (3.0) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1513 7rl7:E (3.0) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1514 7rl7:E (3.0) BS05 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1515 7rl7:F (3.0) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1516 7rl7:F (3.0) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1517 7rla:A (3.1) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1518 7rla:A (3.1) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1519 7rla:A (3.1) BS03 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1520 7rla:B (3.1) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1521 7rla:B (3.1) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1522 7rla:B (3.1) BS03 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1523 7rla:C (3.1) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1524 7rla:C (3.1) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1525 7rla:C (3.1) BS03 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1526 7rla:D (3.1) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1527 7rla:D (3.1) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1528 7rla:D (3.1) BS03 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1529 7rla:E (3.1) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1530 7rla:E (3.1) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1531 7rla:E (3.1) BS03 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1532 7rla:F (3.1) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1533 7rla:F (3.1) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1534 7rla:F (3.1) BS03 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1535 7rlc:A (3.2) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1536 7rlc:A (3.2) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1537 7rlc:B (3.2) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1538 7rlc:B (3.2) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1539 7rlc:C (3.2) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1540 7rlc:C (3.2) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1541 7rlc:D (3.2) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1542 7rlc:D (3.2) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1543 7rlc:E (3.2) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1544 7rlc:E (3.2) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1545 7rlc:F (3.2) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1546 7rlc:F (3.2) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1547 7rlf:A (3.1) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1548 7rlf:A (3.1) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1549 7rlf:B (3.1) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1550 7rlf:B (3.1) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1551 7rlf:C (3.1) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1552 7rlf:C (3.1) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1553 7rlf:C (3.1) BS05 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1554 7rlf:D (3.1) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1555 7rlf:D (3.1) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1556 7rlf:E (3.1) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1557 7rlf:E (3.1) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1558 7rlf:F (3.1) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1559 7rlf:F (3.1) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1560 7rlh:A (3.0) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1561 7rlh:A (3.0) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1562 7rlh:B (3.0) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1563 7rlh:B (3.0) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1564 7rlh:C (3.0) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1565 7rlh:C (3.0) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1566 7rlh:C (3.0) BS04 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1567 7rlh:D (3.0) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1568 7rlh:D (3.0) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1569 7rlh:E (3.0) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1570 7rlh:E (3.0) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1571 7rlh:E (3.0) BS04 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1572 7rlh:F (3.0) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1573 7rlh:F (3.0) BS02 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1574 7rlj:A (3.8) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1575 7rlj:B (3.8) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1576 7rlj:C (3.8) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1577 7rlj:D (3.8) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1578 7rlj:E (3.8) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1579 7rlj:F (3.8) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1580 7rlj:G (3.8) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1581 7rlj:H (3.8) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1582 7rlj:I (3.8) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1583 7rlj:J (3.8) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1584 7rlj:K (3.8) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1585 7rlj:L (3.8) BS01 AGS 3.6.4.6 GO:0000502 ... P55072 34520757
    1586 7rr9:A (3.5) BS02 AGS 3.1.2.-
    7.6.2.-    		 GO:0000038 ... P33897 N/A
    1587 7rr9:B (3.5) BS01 AGS 3.1.2.-
    7.6.2.-    		 GO:0000038 ... P33897 N/A
    1588 7s5e:D (2.4) BS02 AGS 2.7.4.8 GO:0004385 ... B2FT06 N/A
    1589 7s5e:H (2.4) BS02 AGS 2.7.4.8 GO:0004385 ... B2FT06 N/A
    1590 7sgz:A (3.17) BS03 AGS ? GO:0000077 ... P32641 35314830
    1591 7sgz:B (3.17) BS01 AGS ? GO:0000077 ... P40339 35314830
    1592 7sgz:C (3.17) BS01 AGS ? GO:0000077 ... P38629 35314830
    1593 7sgz:D (3.17) BS01 AGS ? GO:0000076 ... P40348 35314830
    1594 7sgz:D (3.17) BS02 AGS ? GO:0000076 ... P40348 35314830
    1595 7sh2:A (3.23) BS03 AGS ? GO:0000077 ... P32641 35314830
    1596 7sh2:B (3.23) BS01 AGS ? GO:0000077 ... P40339 35314830
    1597 7sh2:C (3.23) BS01 AGS ? GO:0000077 ... P38629 35314830
    1598 7sh2:D (3.23) BS01 AGS ? GO:0000076 ... P40348 35314830
    1599 7sh2:D (3.23) BS02 AGS ? GO:0000076 ... P40348 35314830
    1600 7sh2:E (3.23) BS01 AGS ? GO:0000077 ... P38251 35314830
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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