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BioLiP
Download all results in tab-seperated text for 2564 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1001 6rn3:D (4.0) BS04 AGS N/A GO:0005524 ... N/A 31216466
    1002 6rn3:E (4.0) BS02 AGS N/A GO:0005524 ... N/A 31216466
    1003 6rn3:E (4.0) BS03 AGS N/A GO:0005524 ... N/A 31216466
    1004 6rn4:A (4.2) BS02 AGS N/A GO:0005524 ... N/A 31216466
    1005 6rn4:A (4.2) BS03 AGS N/A GO:0005524 ... N/A 31216466
    1006 6rn4:B (4.2) BS02 AGS N/A GO:0005524 ... N/A 31216466
    1007 6rn4:B (4.2) BS03 AGS N/A GO:0005524 ... N/A 31216466
    1008 6rn4:B (4.2) BS04 AGS N/A GO:0005524 ... N/A 31216466
    1009 6rn4:C (4.2) BS02 AGS N/A GO:0005524 ... N/A 31216466
    1010 6rn4:C (4.2) BS03 AGS N/A GO:0005524 ... N/A 31216466
    1011 6rn4:C (4.2) BS04 AGS N/A GO:0005524 ... N/A 31216466
    1012 6rn4:D (4.2) BS02 AGS N/A GO:0005524 ... N/A 31216466
    1013 6rn4:D (4.2) BS03 AGS N/A GO:0005524 ... N/A 31216466
    1014 6rn4:D (4.2) BS04 AGS N/A GO:0005524 ... N/A 31216466
    1015 6rn4:E (4.2) BS02 AGS N/A GO:0005524 ... N/A 31216466
    1016 6rn4:E (4.2) BS03 AGS N/A GO:0005524 ... N/A 31216466
    1017 6rn4:F (4.2) BS01 AGS N/A GO:0005524 ... N/A 31216466
    1018 6s6v:C (3.5) BS01 AGS ? GO:0000014 ... P13458 31492634
    1019 6s6v:C (3.5) BS03 AGS ? GO:0000014 ... P13458 31492634
    1020 6s6v:D (3.5) BS01 AGS ? GO:0000014 ... P13458 31492634
    1021 6s6v:D (3.5) BS02 AGS ? GO:0000014 ... P13458 31492634
    1022 6sdx:A (2.645) BS01 AGS 7.4.2.8 GO:0005524 ... P0A1B9 31393998
    1023 6sky:A (2.8) BS01 AGS 2.7.11.1 GO:0000781 ... G0S4S9 31740028
    1024 6sky:B (2.8) BS01 AGS 2.7.11.1 GO:0000781 ... G0S4S9 31740028
    1025 6skz:A (3.4) BS01 AGS 2.7.11.1 GO:0000781 ... G0S4S9 31740028
    1026 6sl0:A (3.7) BS01 AGS 2.7.11.1 GO:0000781 ... G0S4S9 31740028
    1027 6sl0:B (3.7) BS01 AGS 2.7.11.1 GO:0000781 ... G0S4S9 31740028
    1028 6sl1:A (3.6) BS01 AGS 2.7.11.1 GO:0000781 ... G0S4S9 31740028
    1029 6t4h:A (2.9) BS01 AGS 7.4.2.8 GO:0005524 ... Q183M9 32858965
    1030 6t8b:A (3.65) BS03 AGS ? GO:0000166 ... Q9I0M3 32513722
    1031 6t8b:B (3.65) BS02 AGS ? GO:0000166 ... Q9I0M3 32513722
    1032 6t8b:C (3.65) BS03 AGS ? GO:0000166 ... Q9I0M3 32513722
    1033 6tmx:A (5.8) BS01 AGS ? GO:0005524 ... Q2Z0T5 32339190
    1034 6tmx:B (5.8) BS01 AGS ? GO:0005524 ... Q2Z0T5 32339190
    1035 6tmx:C (5.8) BS01 AGS ? GO:0005524 ... Q2Z0T5 32339190
    1036 6tmx:D (5.8) BS01 AGS ? GO:0005524 ... Q2Z0T5 32339190
    1037 6tmx:E (5.8) BS01 AGS ? GO:0005524 ... Q2Z0T5 32339190
    1038 6tmx:F (5.8) BS01 AGS ? GO:0005524 ... Q2Z0T5 32339190
    1039 6tmx:G (5.8) BS01 AGS ? GO:0005524 ... Q2Z0T5 32339190
    1040 6tmx:H (5.8) BS01 AGS ? GO:0005524 ... Q2Z0T5 32339190
    1041 6tmx:I (5.8) BS01 AGS ? GO:0005524 ... Q2Z0T5 32339190
    1042 6tmx:J (5.8) BS01 AGS ? GO:0005524 ... Q2Z0T5 32339190
    1043 6tmx:K (5.8) BS01 AGS ? GO:0005524 ... Q2Z0T5 32339190
    1044 6tmx:L (5.8) BS01 AGS ? GO:0005524 ... Q2Z0T5 32339190
    1045 6tmx:M (5.8) BS01 AGS ? GO:0005524 ... Q2Z0T5 32339190
    1046 6tmx:N (5.8) BS01 AGS ? GO:0005524 ... Q2Z0T5 32339190
    1047 6tsz:U (1.9) BS01 AGS 2.7.11.1 GO:0004672 ... Q96C45 32814032
    1048 6ui4:A (2.65) BS03 AGS ? GO:0003774 ... I1RCT2 32163521
    1049 6uks:A (3.2) BS01 AGS ? GO:0005524 ... Q9CZP5 32042153
    1050 6uks:A (3.2) BS02 AGS ? GO:0005524 ... Q9CZP5 32042153
    1051 6uks:B (3.2) BS01 AGS ? GO:0005524 ... Q9CZP5 32042153
    1052 6uks:B (3.2) BS02 AGS ? GO:0005524 ... Q9CZP5 32042153
    1053 6uks:C (3.2) BS01 AGS ? GO:0005524 ... Q9CZP5 32042153
    1054 6uks:C (3.2) BS02 AGS ? GO:0005524 ... Q9CZP5 32042153
    1055 6uks:D (3.2) BS01 AGS ? GO:0005524 ... Q9CZP5 32042153
    1056 6uks:D (3.2) BS02 AGS ? GO:0005524 ... Q9CZP5 32042153
    1057 6uks:E (3.2) BS01 AGS ? GO:0005524 ... Q9CZP5 32042153
    1058 6uks:E (3.2) BS02 AGS ? GO:0005524 ... Q9CZP5 32042153
    1059 6uks:F (3.2) BS01 AGS ? GO:0005524 ... Q9CZP5 32042153
    1060 6uks:F (3.2) BS02 AGS ? GO:0005524 ... Q9CZP5 32042153
    1061 6uks:G (3.2) BS01 AGS ? GO:0005524 ... Q9CZP5 32042153
    1062 6uks:G (3.2) BS02 AGS ? GO:0005524 ... Q9CZP5 32042153
    1063 6uqe:B (3.0) BS02 AGS ? GO:0005524 ... P0ABH9 32313240
    1064 6uqe:B (3.0) BS03 AGS ? GO:0005524 ... P0ABH9 32313240
    1065 6uqe:B (3.0) BS04 AGS ? GO:0005524 ... P0ABH9 32313240
    1066 6uqe:C (3.0) BS03 AGS ? GO:0005524 ... P0ABH9 32313240
    1067 6uqe:C (3.0) BS04 AGS ? GO:0005524 ... P0ABH9 32313240
    1068 6uqe:C (3.0) BS05 AGS ? GO:0005524 ... P0ABH9 32313240
    1069 6uqe:D (3.0) BS03 AGS ? GO:0005524 ... P0ABH9 32313240
    1070 6uqe:D (3.0) BS04 AGS ? GO:0005524 ... P0ABH9 32313240
    1071 6uqe:E (3.0) BS03 AGS ? GO:0005524 ... P0ABH9 32313240
    1072 6uqo:A (3.1) BS04 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    1073 6uqo:B (3.1) BS02 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    1074 6uqo:B (3.1) BS03 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    1075 6uqo:B (3.1) BS04 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    1076 6uqo:C (3.1) BS03 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    1077 6uqo:C (3.1) BS04 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    1078 6uqo:C (3.1) BS05 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    1079 6uqo:D (3.1) BS03 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    1080 6uqo:D (3.1) BS04 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    1081 6uqo:E (3.1) BS02 AGS 3.4.21.92 GO:0005524 ... P0ABH9 32313240
    1082 6v4l:C (3.8) BS01 AGS ? GO:0000166 ... Q87KD2 31992706
    1083 6v4l:C (3.8) BS02 AGS ? GO:0000166 ... Q87KD2 31992706
    1084 6v4l:D (3.8) BS01 AGS ? GO:0000166 ... Q87KD2 31992706
    1085 6v4l:D (3.8) BS02 AGS ? GO:0000166 ... Q87KD2 31992706
    1086 6vvo:A (3.4) BS01 AGS ? GO:0003677 ... P35251 N/A
    1087 6vvo:B (3.4) BS01 AGS ? GO:0003677 ... P35250 N/A
    1088 6vvo:C (3.4) BS01 AGS ? GO:0003677 ... P40937 N/A
    1089 6vvo:D (3.4) BS01 AGS ? GO:0003677 ... P35249 N/A
    1090 6w6e:A (3.7) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1091 6w6e:A (3.7) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1092 6w6e:B (3.7) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1093 6w6e:B (3.7) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1094 6w6e:C (3.7) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1095 6w6e:C (3.7) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1096 6w6e:C (3.7) BS04 AGS ? GO:0005524 ... P9WPD1 34038719
    1097 6w6e:D (3.7) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1098 6w6e:D (3.7) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1099 6w6e:D (3.7) BS04 AGS ? GO:0005524 ... P9WPD1 34038719
    1100 6w6e:D (3.7) BS05 AGS ? GO:0005524 ... P9WPD1 34038719
    1101 6w6e:E (3.7) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1102 6w6e:F (3.7) BS01 AGS ? GO:0005524 ... P9WPD1 34038719
    1103 6w6g:A (3.1) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1104 6w6g:A (3.1) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1105 6w6g:B (3.1) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1106 6w6g:B (3.1) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1107 6w6g:B (3.1) BS04 AGS ? GO:0005524 ... P9WPD1 34038719
    1108 6w6g:C (3.1) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1109 6w6g:C (3.1) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1110 6w6g:C (3.1) BS04 AGS ? GO:0005524 ... P9WPD1 34038719
    1111 6w6g:D (3.1) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1112 6w6g:D (3.1) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1113 6w6g:D (3.1) BS04 AGS ? GO:0005524 ... P9WPD1 34038719
    1114 6w6g:E (3.1) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1115 6w6g:F (3.1) BS01 AGS ? GO:0005524 ... P9WPD1 34038719
    1116 6w6h:A (3.3) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1117 6w6h:A (3.3) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1118 6w6h:A (3.3) BS04 AGS ? GO:0005524 ... P9WPD1 34038719
    1119 6w6h:B (3.3) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1120 6w6h:B (3.3) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1121 6w6h:B (3.3) BS04 AGS ? GO:0005524 ... P9WPD1 34038719
    1122 6w6h:C (3.3) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1123 6w6h:C (3.3) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1124 6w6h:C (3.3) BS04 AGS ? GO:0005524 ... P9WPD1 34038719
    1125 6w6h:D (3.3) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1126 6w6h:D (3.3) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1127 6w6h:D (3.3) BS04 AGS ? GO:0005524 ... P9WPD1 34038719
    1128 6w6h:F (3.3) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1129 6w6h:F (3.3) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1130 6w6i:A (3.5) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1131 6w6i:A (3.5) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1132 6w6i:B (3.5) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1133 6w6i:B (3.5) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1134 6w6i:B (3.5) BS04 AGS ? GO:0005524 ... P9WPD1 34038719
    1135 6w6i:C (3.5) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1136 6w6i:C (3.5) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1137 6w6i:D (3.5) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1138 6w6i:D (3.5) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1139 6w6i:D (3.5) BS04 AGS ? GO:0005524 ... P9WPD1 34038719
    1140 6w6i:E (3.5) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1141 6w6i:F (3.5) BS01 AGS ? GO:0005524 ... P9WPD1 34038719
    1142 6w6j:A (3.2) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1143 6w6j:A (3.2) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1144 6w6j:B (3.2) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1145 6w6j:B (3.2) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1146 6w6j:B (3.2) BS04 AGS ? GO:0005524 ... P9WPD1 34038719
    1147 6w6j:C (3.2) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1148 6w6j:C (3.2) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1149 6w6j:D (3.2) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1150 6w6j:D (3.2) BS03 AGS ? GO:0005524 ... P9WPD1 34038719
    1151 6w6j:D (3.2) BS04 AGS ? GO:0005524 ... P9WPD1 34038719
    1152 6w6j:E (3.2) BS02 AGS ? GO:0005524 ... P9WPD1 34038719
    1153 6w6j:F (3.2) BS01 AGS ? GO:0005524 ... P9WPD1 34038719
    1154 6wgc:9 (4.3) BS01 AGS ? GO:0000082 ... P09119 32669428
    1155 6wgc:A (4.3) BS02 AGS ? GO:0003677 ... P54784 32669428
    1156 6wgc:D (4.3) BS02 AGS ? GO:0000808 ... P54791 32669428
    1157 6wgc:E (4.3) BS02 AGS ? GO:0000808 ... P50874 32669428
    1158 6wgg:9 (8.1) BS01 AGS ? GO:0000082 ... P09119 32669428
    1159 6wgg:A (8.1) BS02 AGS ? GO:0003677 ... P54784 32669428
    1160 6wgg:D (8.1) BS02 AGS ? GO:0000808 ... P54791 32669428
    1161 6wgg:E (8.1) BS02 AGS ? GO:0000808 ... P50874 32669428
    1162 6wgi:9 (10.0) BS01 AGS ? GO:0000082 ... P09119 32669428
    1163 6wgi:A (10.0) BS01 AGS ? GO:0003677 ... P54784 32669428
    1164 6wgi:D (10.0) BS01 AGS ? GO:0000808 ... P54791 32669428
    1165 6wgi:E (10.0) BS02 AGS ? GO:0000808 ... P50874 32669428
    1166 6wjd:A (4.8) BS01 AGS ? GO:0000502 ... P35998 32783951
    1167 6wjd:B (4.8) BS01 AGS ? GO:0000502 ... P62191 32783951
    1168 6wjd:D (4.8) BS01 AGS ? GO:0000502 ... P43686 32783951
    1169 6wjd:E (4.8) BS01 AGS ? GO:0000502 ... A0A087X2I1 32783951
    1170 6wjn:A (5.7) BS01 AGS ? GO:0000502 ... P35998 32783951
    1171 6wjn:B (5.7) BS01 AGS ? GO:0005524 ... P62191 32783951
    1172 6wjn:D (5.7) BS01 AGS ? GO:0000502 ... P43686 32783951
    1173 6wjn:E (5.7) BS01 AGS ? GO:0000502 ... P62333 32783951
    1174 6wjn:F (5.7) BS01 AGS ? GO:0000502 ... P17980 32783951
    1175 6wqh:A (3.6) BS02 AGS 3.4.21.53 GO:0004176 ... A0A059VAZ3 34563541
    1176 6wqh:B (3.6) BS02 AGS 3.4.21.53 GO:0004176 ... A0A059VAZ3 34563541
    1177 6wqh:C (3.6) BS02 AGS 3.4.21.53 GO:0004176 ... A0A059VAZ3 34563541
    1178 6wrf:A (3.14) BS02 AGS ? GO:0005524 ... P0A6H1 33089779
    1179 6wrf:B (3.14) BS02 AGS ? GO:0005524 ... P0A6H1 33089779
    1180 6wrf:C (3.14) BS02 AGS ? GO:0005524 ... P0A6H1 33089779
    1181 6wrf:D (3.14) BS01 AGS ? GO:0005524 ... P0A6H1 33089779
    1182 6wrf:E (3.14) BS01 AGS ? GO:0005524 ... P0A6H1 33089779
    1183 6wsg:B (3.16) BS02 AGS ? GO:0005524 ... P0A6H1 33089779
    1184 6wsg:C (3.16) BS02 AGS ? GO:0005524 ... P0A6H1 33089779
    1185 6wsg:D (3.16) BS02 AGS ? GO:0005524 ... P0A6H1 33089779
    1186 6wsg:E (3.16) BS02 AGS ? GO:0005524 ... P0A6H1 33089779
    1187 6wsg:E (3.16) BS03 AGS ? GO:0005524 ... P0A6H1 33089779
    1188 6wsg:F (3.16) BS01 AGS ? GO:0005524 ... P0A6H1 33089779
    1189 6xbz:J (2.8) BS01 AGS 2.7.11.22
    2.7.11.23
    GO:0000307 ... P50613 32855301
    1190 6xjh:C (3.6) BS01 AGS ? GO:0005524 ... X5EJW5 32998902
    1191 6xjh:C (3.6) BS03 AGS ? GO:0005524 ... X5EJW5 32998902
    1192 6xjh:D (3.6) BS01 AGS ? GO:0005524 ... X5EJW5 32998902
    1193 6xjh:D (3.6) BS02 AGS ? GO:0005524 ... X5EJW5 32998902
    1194 6xji:C (4.0) BS01 AGS ? GO:0005524 ... X5EJW5 32998902
    1195 6xji:C (4.0) BS03 AGS ? GO:0005524 ... X5EJW5 32998902
    1196 6xji:D (4.0) BS01 AGS ? GO:0005524 ... X5EJW5 32998902
    1197 6xji:D (4.0) BS02 AGS ? GO:0005524 ... X5EJW5 32998902
    1198 6xlg:A (2.71) BS01 AGS ? GO:0000492 ... P15108 N/A
    1199 6xlg:B (2.71) BS01 AGS ? GO:0000492 ... P15108 N/A
    1200 6xlh:A (2.83) BS01 AGS ? GO:0000492 ... P15108 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218