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BioLiP
Download all results in tab-seperated text for 2564 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    801 6lt4:I (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    802 6lt4:I (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    803 6lt4:J (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    804 6lt4:J (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    805 6lt4:K (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    806 6lt4:K (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    807 6lt4:L (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    808 6lt4:L (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    809 6lt4:M (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    810 6lt4:M (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    811 6lt4:N (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    812 6lt4:N (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    813 6m6b:M (4.1) BS03 AGS 3.6.4.- GO:0000716 ... Q72KB4 33068413
    814 6nyb:A (4.1) BS01 AGS 2.7.11.1 GO:0000165 ... P15056 31581174
    815 6o1x:A (2.46) BS03 AGS ? GO:0000166 ... Q1PLI0 N/A
    816 6oax:A (2.9) BS02 AGS ? GO:0005515 ... P63284 31160557
    817 6oax:A (2.9) BS03 AGS ? GO:0005515 ... P63284 31160557
    818 6oax:B (2.9) BS02 AGS ? GO:0005515 ... P63284 31160557
    819 6oax:B (2.9) BS03 AGS ? GO:0005515 ... P63284 31160557
    820 6oax:B (2.9) BS04 AGS ? GO:0005515 ... P63284 31160557
    821 6oax:C (2.9) BS02 AGS ? GO:0005515 ... P63284 31160557
    822 6oax:C (2.9) BS03 AGS ? GO:0005515 ... P63284 31160557
    823 6oax:C (2.9) BS04 AGS ? GO:0005515 ... P63284 31160557
    824 6oax:D (2.9) BS02 AGS ? GO:0005515 ... P63284 31160557
    825 6oax:D (2.9) BS03 AGS ? GO:0005515 ... P63284 31160557
    826 6oax:D (2.9) BS04 AGS ? GO:0005515 ... P63284 31160557
    827 6oax:E (2.9) BS02 AGS ? GO:0005515 ... P63284 31160557
    828 6oax:E (2.9) BS03 AGS ? GO:0005515 ... P63284 31160557
    829 6oay:B (3.3) BS02 AGS ? GO:0005515 ... P63284 31160557
    830 6oay:C (3.3) BS02 AGS ? GO:0005515 ... P63284 31160557
    831 6oay:C (3.3) BS03 AGS ? GO:0005515 ... P63284 31160557
    832 6oay:D (3.3) BS02 AGS ? GO:0005515 ... P63284 31160557
    833 6oay:D (3.3) BS03 AGS ? GO:0005515 ... P63284 31160557
    834 6oay:D (3.3) BS04 AGS ? GO:0005515 ... P63284 31160557
    835 6oay:E (3.3) BS02 AGS ? GO:0005515 ... P63284 31160557
    836 6oay:E (3.3) BS03 AGS ? GO:0005515 ... P63284 31160557
    837 6of2:B (2.9) BS01 AGS ? GO:0006396 ... G0S263 31488907
    838 6of2:E (2.9) BS01 AGS ? GO:0006396 ... G0S263 31488907
    839 6of3:B (3.0) BS01 AGS ? GO:0006396 ... G0S263 31488907
    840 6of3:E (3.0) BS01 AGS ? GO:0006396 ... G0S263 31488907
    841 6og1:A (3.3) BS01 AGS ? GO:0005515 ... P63284 31160557
    842 6po1:A (4.2) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    843 6po1:B (4.2) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    844 6po1:C (4.2) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    845 6po1:D (4.2) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    846 6po1:D (4.2) BS03 AGS ? GO:0005524 ... P0A6H1 32108573
    847 6po1:E (4.2) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    848 6po1:E (4.2) BS03 AGS ? GO:0005524 ... P0A6H1 32108573
    849 6po3:A (4.28) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    850 6po3:B (4.28) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    851 6po3:C (4.28) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    852 6po3:D (4.28) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    853 6po3:E (4.28) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    854 6po3:E (4.28) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    855 6pod:B (4.05) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    856 6pod:C (4.05) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    857 6pod:D (4.05) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    858 6pod:D (4.05) BS03 AGS ? GO:0005524 ... P0A6H1 32108573
    859 6pod:E (4.05) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    860 6pod:F (4.05) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    861 6pos:A (4.12) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    862 6pos:B (4.12) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    863 6pos:C (4.12) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    864 6pos:D (4.12) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    865 6pos:D (4.12) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    866 6pos:E (4.12) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    867 6pos:E (4.12) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    868 6pp5:A (3.98) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    869 6pp5:B (3.98) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    870 6pp5:C (3.98) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    871 6pp5:D (3.98) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    872 6pp5:E (3.98) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    873 6pp5:E (3.98) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    874 6pp6:A (4.28) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    875 6pp6:B (4.28) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    876 6pp6:C (4.28) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    877 6pp6:D (4.28) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    878 6pp6:E (4.28) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    879 6pp6:E (4.28) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    880 6pp7:B (4.05) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    881 6pp7:C (4.05) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    882 6pp7:D (4.05) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    883 6pp7:D (4.05) BS03 AGS ? GO:0005524 ... P0A6H1 32108573
    884 6pp7:E (4.05) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    885 6pp7:F (4.05) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    886 6pp8:A (4.12) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    887 6pp8:B (4.12) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    888 6pp8:C (4.12) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    889 6pp8:D (4.12) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    890 6pp8:D (4.12) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    891 6pp8:E (4.12) BS01 AGS ? GO:0005524 ... P0A6H1 32108573
    892 6pp8:E (4.12) BS02 AGS ? GO:0005524 ... P0A6H1 32108573
    893 6q0j:C (4.9) BS02 AGS 2.7.12.2 GO:0000165 ... Q02750 31581174
    894 6q0j:D (4.9) BS02 AGS 2.7.12.2 GO:0000165 ... Q02750 31581174
    895 6q0t:C (5.7) BS02 AGS 2.7.12.2 GO:0000165 ... Q02750 31581174
    896 6qpw:A (3.3) BS01 AGS ? GO:0005524 ... G0SGH3 32066964
    897 6qpw:C (3.3) BS01 AGS ? GO:0005524 ... P47037 32066964
    898 6qpw:C (3.3) BS03 AGS ? GO:0005524 ... P47037 32066964
    899 6qpw:E (3.3) BS01 AGS ? GO:0005524 ... G0SGH3
    Q12158
    32066964
    900 6qpw:E (3.3) BS02 AGS ? GO:0005524 ... G0SGH3
    Q12158
    32066964
    901 6qs4:A (4.2) BS02 AGS ? GO:0005524 ... E0J719 31216466
    902 6qs4:B (4.2) BS02 AGS ? GO:0005524 ... E0J719 31216466
    903 6qs4:C (4.2) BS02 AGS ? GO:0005524 ... E0J719 31216466
    904 6qs4:C (4.2) BS03 AGS ? GO:0005524 ... E0J719 31216466
    905 6qs4:C (4.2) BS04 AGS ? GO:0005524 ... E0J719 31216466
    906 6qs4:D (4.2) BS02 AGS ? GO:0005524 ... E0J719 31216466
    907 6qs4:D (4.2) BS03 AGS ? GO:0005524 ... E0J719 31216466
    908 6qs4:E (4.2) BS02 AGS ? GO:0005524 ... E0J719 31216466
    909 6qs4:E (4.2) BS03 AGS ? GO:0005524 ... E0J719 31216466
    910 6qs4:F (4.2) BS01 AGS ? GO:0005524 ... E0J719 31216466
    911 6qs6:A (3.9) BS02 AGS ? GO:0005515 ... P63284 31216466
    912 6qs6:A (3.9) BS04 AGS ? GO:0005515 ... P63284 31216466
    913 6qs6:B (3.9) BS02 AGS ? GO:0005515 ... P63284 31216466
    914 6qs6:B (3.9) BS03 AGS ? GO:0005515 ... P63284 31216466
    915 6qs6:B (3.9) BS04 AGS ? GO:0005515 ... P63284 31216466
    916 6qs6:C (3.9) BS02 AGS ? GO:0005515 ... P63284 31216466
    917 6qs6:C (3.9) BS03 AGS ? GO:0005515 ... P63284 31216466
    918 6qs6:C (3.9) BS04 AGS ? GO:0005515 ... P63284 31216466
    919 6qs6:D (3.9) BS02 AGS ? GO:0005515 ... P63284 31216466
    920 6qs6:D (3.9) BS03 AGS ? GO:0005515 ... P63284 31216466
    921 6qs6:E (3.9) BS02 AGS ? GO:0005515 ... P63284 31216466
    922 6qs6:E (3.9) BS03 AGS ? GO:0005515 ... P63284 31216466
    923 6qs7:A (3.8) BS02 AGS ? GO:0005515 ... P63284 31216466
    924 6qs7:A (3.8) BS03 AGS ? GO:0005515 ... P63284 31216466
    925 6qs7:B (3.8) BS02 AGS ? GO:0005515 ... P63284 31216466
    926 6qs7:B (3.8) BS03 AGS ? GO:0005515 ... P63284 31216466
    927 6qs7:B (3.8) BS04 AGS ? GO:0005515 ... P63284 31216466
    928 6qs7:C (3.8) BS02 AGS ? GO:0005515 ... P63284 31216466
    929 6qs7:C (3.8) BS03 AGS ? GO:0005515 ... P63284 31216466
    930 6qs7:C (3.8) BS05 AGS ? GO:0005515 ... P63284 31216466
    931 6qs7:C (3.8) BS06 AGS ? GO:0005515 ... P63284 31216466
    932 6qs7:D (3.8) BS02 AGS ? GO:0005515 ... P63284 31216466
    933 6qs7:D (3.8) BS03 AGS ? GO:0005515 ... P63284 31216466
    934 6qs7:D (3.8) BS05 AGS ? GO:0005515 ... P63284 31216466
    935 6qs7:E (3.8) BS02 AGS ? GO:0005515 ... P63284 31216466
    936 6qs7:E (3.8) BS03 AGS ? GO:0005515 ... P63284 31216466
    937 6qs7:F (3.8) BS02 AGS ? GO:0005515 ... P63284 31216466
    938 6qs8:A (3.9) BS02 AGS ? GO:0005515 ... P63284 31216466
    939 6qs8:A (3.9) BS03 AGS ? GO:0005515 ... P63284 31216466
    940 6qs8:B (3.9) BS02 AGS ? GO:0005515 ... P63284 31216466
    941 6qs8:B (3.9) BS03 AGS ? GO:0005515 ... P63284 31216466
    942 6qs8:B (3.9) BS04 AGS ? GO:0005515 ... P63284 31216466
    943 6qs8:C (3.9) BS02 AGS ? GO:0005515 ... P63284 31216466
    944 6qs8:C (3.9) BS03 AGS ? GO:0005515 ... P63284 31216466
    945 6qs8:C (3.9) BS05 AGS ? GO:0005515 ... P63284 31216466
    946 6qs8:C (3.9) BS06 AGS ? GO:0005515 ... P63284 31216466
    947 6qs8:D (3.9) BS02 AGS ? GO:0005515 ... P63284 31216466
    948 6qs8:D (3.9) BS03 AGS ? GO:0005515 ... P63284 31216466
    949 6qs8:D (3.9) BS05 AGS ? GO:0005515 ... P63284 31216466
    950 6qs8:E (3.9) BS02 AGS ? GO:0005515 ... P63284 31216466
    951 6qs8:E (3.9) BS03 AGS ? GO:0005515 ... P63284 31216466
    952 6qs8:F (3.9) BS02 AGS ? GO:0005515 ... P63284 31216466
    953 6quz:A (3.21) BS01 AGS ? GO:0005515 ... Q9WYC3 31113958
    954 6quz:A (3.21) BS03 AGS ? GO:0005515 ... Q9WYC3 31113958
    955 6quz:B (3.21) BS01 AGS ? GO:0005515 ... Q9WYC4 31113958
    956 6quz:B (3.21) BS02 AGS ? GO:0005515 ... Q9WYC4 31113958
    957 6quz:C (3.21) BS01 AGS ? GO:0005515 ... Q9WYC3 31113958
    958 6quz:C (3.21) BS03 AGS ? GO:0005515 ... Q9WYC3 31113958
    959 6quz:D (3.21) BS01 AGS ? GO:0005515 ... Q9WYC4 31113958
    960 6quz:D (3.21) BS02 AGS ? GO:0005515 ... Q9WYC4 31113958
    961 6qv1:A (3.48) BS01 AGS ? GO:0005515 ... Q9WYC3 31113958
    962 6qv1:A (3.48) BS03 AGS ? GO:0005515 ... Q9WYC3 31113958
    963 6qv1:B (3.48) BS01 AGS ? GO:0005515 ... Q9WYC4 31113958
    964 6qv1:B (3.48) BS02 AGS ? GO:0005515 ... Q9WYC4 31113958
    965 6qv1:C (3.48) BS01 AGS ? GO:0005515 ... Q9WYC3 31113958
    966 6qv1:C (3.48) BS03 AGS ? GO:0005515 ... Q9WYC3 31113958
    967 6qv1:D (3.48) BS01 AGS ? GO:0005515 ... Q9WYC4 31113958
    968 6qv1:D (3.48) BS02 AGS ? GO:0005515 ... Q9WYC4 31113958
    969 6qv2:A (4.23) BS01 AGS ? GO:0005515 ... Q9WYC3 31113958
    970 6qv2:A (4.23) BS03 AGS ? GO:0005515 ... Q9WYC3 31113958
    971 6qv2:B (4.23) BS01 AGS ? GO:0005515 ... Q9WYC4 31113958
    972 6qv2:B (4.23) BS02 AGS ? GO:0005515 ... Q9WYC4 31113958
    973 6qv2:C (4.23) BS01 AGS ? GO:0005515 ... Q9WYC3 31113958
    974 6qv2:C (4.23) BS03 AGS ? GO:0005515 ... Q9WYC3 31113958
    975 6qv2:D (4.23) BS01 AGS ? GO:0005515 ... Q9WYC4 31113958
    976 6qv2:D (4.23) BS02 AGS ? GO:0005515 ... Q9WYC4 31113958
    977 6qv4:A (2.8) BS03 AGS ? GO:0003676 ... G0S0B9 31859026
    978 6qv4:A (2.8) BS04 AGS ? GO:0003676 ... G0S0B9 31859026
    979 6qv4:A (2.8) BS05 AGS ? GO:0003676 ... G0S0B9 31859026
    980 6rn2:A (6.2) BS02 AGS N/A GO:0005524 ... N/A 31216466
    981 6rn2:A (6.2) BS04 AGS N/A GO:0005524 ... N/A 31216466
    982 6rn2:B (6.2) BS02 AGS N/A GO:0005524 ... N/A 31216466
    983 6rn2:B (6.2) BS03 AGS N/A GO:0005524 ... N/A 31216466
    984 6rn2:B (6.2) BS04 AGS N/A GO:0005524 ... N/A 31216466
    985 6rn2:C (6.2) BS02 AGS N/A GO:0005524 ... N/A 31216466
    986 6rn2:C (6.2) BS03 AGS N/A GO:0005524 ... N/A 31216466
    987 6rn2:C (6.2) BS04 AGS N/A GO:0005524 ... N/A 31216466
    988 6rn2:D (6.2) BS02 AGS N/A GO:0005524 ... N/A 31216466
    989 6rn2:D (6.2) BS03 AGS N/A GO:0005524 ... N/A 31216466
    990 6rn2:E (6.2) BS01 AGS N/A GO:0005524 ... N/A 31216466
    991 6rn2:E (6.2) BS02 AGS N/A GO:0005524 ... N/A 31216466
    992 6rn3:A (4.0) BS02 AGS N/A GO:0005524 ... N/A 31216466
    993 6rn3:A (4.0) BS04 AGS N/A GO:0005524 ... N/A 31216466
    994 6rn3:B (4.0) BS02 AGS N/A GO:0005524 ... N/A 31216466
    995 6rn3:B (4.0) BS03 AGS N/A GO:0005524 ... N/A 31216466
    996 6rn3:C (4.0) BS02 AGS N/A GO:0005524 ... N/A 31216466
    997 6rn3:C (4.0) BS03 AGS N/A GO:0005524 ... N/A 31216466
    998 6rn3:C (4.0) BS04 AGS N/A GO:0005524 ... N/A 31216466
    999 6rn3:D (4.0) BS02 AGS N/A GO:0005524 ... N/A 31216466
    1000 6rn3:D (4.0) BS03 AGS N/A GO:0005524 ... N/A 31216466

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218