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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 12079 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    11201 8sg9:Q (2.9) BS01 ADP ? GO:0002199 ... P50990 37852256
    11202 8sg9:Z (2.9) BS01 ADP ? GO:0003723 ... P40227 37852256
    11203 8sg9:a (2.9) BS01 ADP ? GO:0000242 ... P17987 37852256
    11204 8sg9:b (2.9) BS01 ADP ? GO:0002199 ... P78371 37852256
    11205 8sg9:d (2.9) BS01 ADP ? GO:0002199 ... P50991 37852256
    11206 8sg9:e (2.9) BS01 ADP ? GO:0003730 ... P48643 37852256
    11207 8sg9:g (2.9) BS01 ADP ? GO:0002199 ... P49368 37852256
    11208 8sg9:h (2.9) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11209 8sg9:q (2.9) BS01 ADP ? GO:0002199 ... P50990 37852256
    11210 8sg9:z (2.9) BS01 ADP ? GO:0003723 ... P40227 37852256
    11211 8sgc:A (2.9) BS01 ADP ? GO:0000242 ... P17987 37852256
    11212 8sgc:B (2.9) BS01 ADP ? GO:0002199 ... P78371 37852256
    11213 8sgc:D (2.9) BS01 ADP ? GO:0002199 ... P50991 37852256
    11214 8sgc:E (2.9) BS01 ADP ? GO:0003730 ... P48643 37852256
    11215 8sgc:G (2.9) BS01 ADP ? GO:0002199 ... P49368 37852256
    11216 8sgc:H (2.9) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11217 8sgc:Q (2.9) BS01 ADP ? GO:0002199 ... P50990 37852256
    11218 8sgc:Z (2.9) BS01 ADP ? GO:0003723 ... P40227 37852256
    11219 8sgc:a (2.9) BS01 ADP ? GO:0000242 ... P17987 37852256
    11220 8sgc:b (2.9) BS01 ADP ? GO:0002199 ... P78371 37852256
    11221 8sgc:d (2.9) BS01 ADP ? GO:0002199 ... P50991 37852256
    11222 8sgc:e (2.9) BS01 ADP ? GO:0003730 ... P48643 37852256
    11223 8sgc:g (2.9) BS01 ADP ? GO:0002199 ... P49368 37852256
    11224 8sgc:h (2.9) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11225 8sgc:q (2.9) BS01 ADP ? GO:0002199 ... P50990 37852256
    11226 8sgc:z (2.9) BS01 ADP ? GO:0003723 ... P40227 37852256
    11227 8sgl:A (2.9) BS01 ADP ? GO:0000242 ... P17987 37852256
    11228 8sgl:B (2.9) BS01 ADP ? GO:0002199 ... P78371 37852256
    11229 8sgl:D (2.9) BS01 ADP ? GO:0002199 ... P50991 37852256
    11230 8sgl:E (2.9) BS01 ADP ? GO:0003730 ... P48643 37852256
    11231 8sgl:G (2.9) BS01 ADP ? GO:0002199 ... P49368 37852256
    11232 8sgl:H (2.9) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11233 8sgl:Q (2.9) BS01 ADP ? GO:0002199 ... P50990 37852256
    11234 8sgl:Z (2.9) BS01 ADP ? GO:0003723 ... P40227 37852256
    11235 8sgl:a (2.9) BS01 ADP ? GO:0000242 ... P17987 37852256
    11236 8sgl:b (2.9) BS01 ADP ? GO:0002199 ... P78371 37852256
    11237 8sgl:d (2.9) BS01 ADP ? GO:0002199 ... P50991 37852256
    11238 8sgl:e (2.9) BS01 ADP ? GO:0003730 ... P48643 37852256
    11239 8sgl:g (2.9) BS01 ADP ? GO:0002199 ... P49368 37852256
    11240 8sgl:h (2.9) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11241 8sgl:q (2.9) BS01 ADP ? GO:0002199 ... P50990 37852256
    11242 8sgl:z (2.9) BS01 ADP ? GO:0003723 ... P40227 37852256
    11243 8sgq:A (3.7) BS01 ADP ? GO:0000242 ... P17987 37852256
    11244 8sgq:B (3.7) BS01 ADP ? GO:0002199 ... P78371 37852256
    11245 8sgq:D (3.7) BS01 ADP ? GO:0002199 ... P50991 37852256
    11246 8sgq:E (3.7) BS01 ADP ? GO:0003730 ... P48643 37852256
    11247 8sgq:G (3.7) BS01 ADP ? GO:0002199 ... P49368 37852256
    11248 8sgq:H (3.7) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11249 8sgq:Q (3.7) BS01 ADP ? GO:0002199 ... P50990 37852256
    11250 8sgq:Z (3.7) BS01 ADP ? GO:0003723 ... P40227 37852256
    11251 8sgq:a (3.7) BS01 ADP ? GO:0000242 ... P17987 37852256
    11252 8sgq:b (3.7) BS01 ADP ? GO:0002199 ... P78371 37852256
    11253 8sgq:d (3.7) BS01 ADP ? GO:0002199 ... P50991 37852256
    11254 8sgq:e (3.7) BS01 ADP ? GO:0003730 ... P48643 37852256
    11255 8sgq:g (3.7) BS01 ADP ? GO:0002199 ... P49368 37852256
    11256 8sgq:h (3.7) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11257 8sgq:q (3.7) BS01 ADP ? GO:0002199 ... P50990 37852256
    11258 8sgq:z (3.7) BS01 ADP ? GO:0003723 ... P40227 37852256
    11259 8sh9:A (2.7) BS01 ADP ? GO:0000242 ... P17987 37852256
    11260 8sh9:B (2.7) BS01 ADP ? GO:0002199 ... P78371 37852256
    11261 8sh9:D (2.7) BS01 ADP ? GO:0002199 ... P50991 37852256
    11262 8sh9:E (2.7) BS01 ADP ? GO:0003730 ... P48643 37852256
    11263 8sh9:G (2.7) BS01 ADP ? GO:0002199 ... P49368 37852256
    11264 8sh9:H (2.7) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11265 8sh9:Q (2.7) BS01 ADP ? GO:0002199 ... P50990 37852256
    11266 8sh9:Z (2.7) BS01 ADP ? GO:0003723 ... P40227 37852256
    11267 8sh9:a (2.7) BS01 ADP ? GO:0000242 ... P17987 37852256
    11268 8sh9:b (2.7) BS01 ADP ? GO:0002199 ... P78371 37852256
    11269 8sh9:d (2.7) BS01 ADP ? GO:0002199 ... P50991 37852256
    11270 8sh9:e (2.7) BS01 ADP ? GO:0003730 ... P48643 37852256
    11271 8sh9:g (2.7) BS01 ADP ? GO:0002199 ... P49368 37852256
    11272 8sh9:h (2.7) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11273 8sh9:q (2.7) BS01 ADP ? GO:0002199 ... P50990 37852256
    11274 8sh9:z (2.7) BS01 ADP ? GO:0003723 ... P40227 37852256
    11275 8sha:A (3.0) BS01 ADP ? GO:0000242 ... P17987 37852256
    11276 8sha:B (3.0) BS01 ADP ? GO:0002199 ... P78371 37852256
    11277 8sha:D (3.0) BS01 ADP ? GO:0002199 ... P50991 37852256
    11278 8sha:E (3.0) BS01 ADP ? GO:0003730 ... P48643 37852256
    11279 8sha:G (3.0) BS01 ADP ? GO:0002199 ... P49368 37852256
    11280 8sha:H (3.0) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11281 8sha:Q (3.0) BS01 ADP ? GO:0002199 ... P50990 37852256
    11282 8sha:Z (3.0) BS01 ADP ? GO:0003723 ... P40227 37852256
    11283 8sha:a (3.0) BS01 ADP ? GO:0000242 ... P17987 37852256
    11284 8sha:b (3.0) BS01 ADP ? GO:0002199 ... P78371 37852256
    11285 8sha:d (3.0) BS01 ADP ? GO:0002199 ... P50991 37852256
    11286 8sha:e (3.0) BS01 ADP ? GO:0003730 ... P48643 37852256
    11287 8sha:g (3.0) BS01 ADP ? GO:0002199 ... P49368 37852256
    11288 8sha:h (3.0) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11289 8sha:q (3.0) BS01 ADP ? GO:0002199 ... P50990 37852256
    11290 8sha:z (3.0) BS01 ADP ? GO:0003723 ... P40227 37852256
    11291 8shd:A (2.9) BS01 ADP ? GO:0000242 ... P17987 37852256
    11292 8shd:B (2.9) BS01 ADP ? GO:0002199 ... P78371 37852256
    11293 8shd:D (2.9) BS01 ADP ? GO:0002199 ... P50991 37852256
    11294 8shd:E (2.9) BS01 ADP ? GO:0003730 ... P48643 37852256
    11295 8shd:G (2.9) BS01 ADP ? GO:0002199 ... P49368 37852256
    11296 8shd:H (2.9) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11297 8shd:Q (2.9) BS01 ADP ? GO:0002199 ... P50990 37852256
    11298 8shd:Z (2.9) BS01 ADP ? GO:0003723 ... P40227 37852256
    11299 8shd:a (2.9) BS01 ADP ? GO:0000242 ... P17987 37852256
    11300 8shd:b (2.9) BS01 ADP ? GO:0002199 ... P78371 37852256
    11301 8shd:d (2.9) BS01 ADP ? GO:0002199 ... P50991 37852256
    11302 8shd:e (2.9) BS01 ADP ? GO:0003730 ... P48643 37852256
    11303 8shd:g (2.9) BS01 ADP ? GO:0002199 ... P49368 37852256
    11304 8shd:h (2.9) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11305 8shd:q (2.9) BS01 ADP ? GO:0002199 ... P50990 37852256
    11306 8shd:z (2.9) BS01 ADP ? GO:0003723 ... P40227 37852256
    11307 8she:A (2.8) BS01 ADP ? GO:0000242 ... P17987 37852256
    11308 8she:B (2.8) BS01 ADP ? GO:0002199 ... P78371 37852256
    11309 8she:D (2.8) BS01 ADP ? GO:0002199 ... P50991 37852256
    11310 8she:E (2.8) BS01 ADP ? GO:0003730 ... P48643 37852256
    11311 8she:G (2.8) BS01 ADP ? GO:0002199 ... P49368 37852256
    11312 8she:H (2.8) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11313 8she:Q (2.8) BS01 ADP ? GO:0002199 ... P50990 37852256
    11314 8she:Z (2.8) BS01 ADP ? GO:0003723 ... P40227 37852256
    11315 8she:a (2.8) BS01 ADP ? GO:0000242 ... P17987 37852256
    11316 8she:b (2.8) BS01 ADP ? GO:0002199 ... P78371 37852256
    11317 8she:d (2.8) BS01 ADP ? GO:0002199 ... P50991 37852256
    11318 8she:e (2.8) BS01 ADP ? GO:0003730 ... P48643 37852256
    11319 8she:g (2.8) BS01 ADP ? GO:0002199 ... P49368 37852256
    11320 8she:h (2.8) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11321 8she:q (2.8) BS01 ADP ? GO:0002199 ... P50990 37852256
    11322 8she:z (2.8) BS01 ADP ? GO:0003723 ... P40227 37852256
    11323 8shf:A (3.0) BS01 ADP ? GO:0000242 ... P17987 37852256
    11324 8shf:B (3.0) BS01 ADP ? GO:0002199 ... P78371 37852256
    11325 8shf:D (3.0) BS01 ADP ? GO:0002199 ... P50991 37852256
    11326 8shf:E (3.0) BS01 ADP ? GO:0003730 ... P48643 37852256
    11327 8shf:G (3.0) BS01 ADP ? GO:0002199 ... P49368 37852256
    11328 8shf:H (3.0) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11329 8shf:Q (3.0) BS01 ADP ? GO:0002199 ... P50990 37852256
    11330 8shf:Z (3.0) BS01 ADP ? GO:0003723 ... P40227 37852256
    11331 8shf:a (3.0) BS01 ADP ? GO:0000242 ... P17987 37852256
    11332 8shf:b (3.0) BS01 ADP ? GO:0002199 ... P78371 37852256
    11333 8shf:d (3.0) BS01 ADP ? GO:0002199 ... P50991 37852256
    11334 8shf:e (3.0) BS01 ADP ? GO:0003730 ... P48643 37852256
    11335 8shf:g (3.0) BS01 ADP ? GO:0002199 ... P49368 37852256
    11336 8shf:h (3.0) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11337 8shf:q (3.0) BS01 ADP ? GO:0002199 ... P50990 37852256
    11338 8shf:z (3.0) BS01 ADP ? GO:0003723 ... P40227 37852256
    11339 8shg:A (2.8) BS01 ADP ? GO:0000242 ... P17987 37852256
    11340 8shg:B (2.8) BS01 ADP ? GO:0002199 ... P78371 37852256
    11341 8shg:D (2.8) BS01 ADP ? GO:0002199 ... P50991 37852256
    11342 8shg:E (2.8) BS01 ADP ? GO:0003730 ... P48643 37852256
    11343 8shg:G (2.8) BS01 ADP ? GO:0002199 ... P49368 37852256
    11344 8shg:H (2.8) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11345 8shg:Q (2.8) BS01 ADP ? GO:0002199 ... P50990 37852256
    11346 8shg:Z (2.8) BS01 ADP ? GO:0003723 ... P40227 37852256
    11347 8shg:a (2.8) BS01 ADP ? GO:0000242 ... P17987 37852256
    11348 8shg:b (2.8) BS01 ADP ? GO:0002199 ... P78371 37852256
    11349 8shg:d (2.8) BS01 ADP ? GO:0002199 ... P50991 37852256
    11350 8shg:e (2.8) BS01 ADP ? GO:0003730 ... P48643 37852256
    11351 8shg:g (2.8) BS01 ADP ? GO:0002199 ... P49368 37852256
    11352 8shg:h (2.8) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11353 8shg:q (2.8) BS01 ADP ? GO:0002199 ... P50990 37852256
    11354 8shg:z (2.8) BS01 ADP ? GO:0003723 ... P40227 37852256
    11355 8shl:A (3.0) BS01 ADP ? GO:0000242 ... P17987 37852256
    11356 8shl:B (3.0) BS01 ADP ? GO:0002199 ... P78371 37852256
    11357 8shl:D (3.0) BS01 ADP ? GO:0002199 ... P50991 37852256
    11358 8shl:E (3.0) BS01 ADP ? GO:0003730 ... P48643 37852256
    11359 8shl:G (3.0) BS01 ADP ? GO:0002199 ... P49368 37852256
    11360 8shl:H (3.0) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11361 8shl:Q (3.0) BS01 ADP ? GO:0002199 ... P50990 37852256
    11362 8shl:Z (3.0) BS01 ADP ? GO:0003723 ... P40227 37852256
    11363 8shl:a (3.0) BS01 ADP ? GO:0000242 ... P17987 37852256
    11364 8shl:b (3.0) BS01 ADP ? GO:0002199 ... P78371 37852256
    11365 8shl:d (3.0) BS01 ADP ? GO:0002199 ... P50991 37852256
    11366 8shl:e (3.0) BS01 ADP ? GO:0003730 ... P48643 37852256
    11367 8shl:g (3.0) BS01 ADP ? GO:0002199 ... P49368 37852256
    11368 8shl:h (3.0) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11369 8shl:q (3.0) BS01 ADP ? GO:0002199 ... P50990 37852256
    11370 8shl:z (3.0) BS01 ADP ? GO:0003723 ... P40227 37852256
    11371 8shn:A (2.8) BS01 ADP ? GO:0000242 ... P17987 37852256
    11372 8shn:B (2.8) BS01 ADP ? GO:0002199 ... P78371 37852256
    11373 8shn:D (2.8) BS01 ADP ? GO:0002199 ... P50991 37852256
    11374 8shn:E (2.8) BS01 ADP ? GO:0003730 ... P48643 37852256
    11375 8shn:G (2.8) BS01 ADP ? GO:0002199 ... P49368 37852256
    11376 8shn:H (2.8) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11377 8shn:Q (2.8) BS01 ADP ? GO:0002199 ... P50990 37852256
    11378 8shn:Z (2.8) BS01 ADP ? GO:0003723 ... P40227 37852256
    11379 8shn:a (2.8) BS01 ADP ? GO:0000242 ... P17987 37852256
    11380 8shn:b (2.8) BS01 ADP ? GO:0002199 ... P78371 37852256
    11381 8shn:d (2.8) BS01 ADP ? GO:0002199 ... P50991 37852256
    11382 8shn:e (2.8) BS01 ADP ? GO:0003730 ... P48643 37852256
    11383 8shn:g (2.8) BS01 ADP ? GO:0002199 ... P49368 37852256
    11384 8shn:h (2.8) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11385 8shn:q (2.8) BS01 ADP ? GO:0002199 ... P50990 37852256
    11386 8shn:z (2.8) BS01 ADP ? GO:0003723 ... P40227 37852256
    11387 8sho:A (3.0) BS01 ADP ? GO:0000242 ... P17987 37852256
    11388 8sho:B (3.0) BS01 ADP ? GO:0002199 ... P78371 37852256
    11389 8sho:D (3.0) BS01 ADP ? GO:0002199 ... P50991 37852256
    11390 8sho:E (3.0) BS01 ADP ? GO:0003730 ... P48643 37852256
    11391 8sho:G (3.0) BS01 ADP ? GO:0002199 ... P49368 37852256
    11392 8sho:H (3.0) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11393 8sho:Q (3.0) BS01 ADP ? GO:0002199 ... P50990 37852256
    11394 8sho:Z (3.0) BS01 ADP ? GO:0003723 ... P40227 37852256
    11395 8sho:a (3.0) BS01 ADP ? GO:0000242 ... P17987 37852256
    11396 8sho:b (3.0) BS01 ADP ? GO:0002199 ... P78371 37852256
    11397 8sho:d (3.0) BS01 ADP ? GO:0002199 ... P50991 37852256
    11398 8sho:e (3.0) BS01 ADP ? GO:0003730 ... P48643 37852256
    11399 8sho:g (3.0) BS01 ADP ? GO:0002199 ... P49368 37852256
    11400 8sho:h (3.0) BS01 ADP ? GO:0005515 ... Q99832 37852256
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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