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BioLiP
Download all results in tab-seperated text for 12079 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    11001 8qw3:F (1.255) BS01 ADP N/A N/A Q13232 N/A
    11002 8qxs:A (3.12) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11003 8qxs:B (3.12) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11004 8qxs:C (3.12) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11005 8qxs:D (3.12) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11006 8qxs:E (3.12) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11007 8qxs:F (3.12) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11008 8qxs:G (3.12) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11009 8qxs:H (3.12) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11010 8qxs:I (3.12) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11011 8qxs:J (3.12) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11012 8qxs:K (3.12) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11013 8qxs:L (3.12) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11014 8qxs:M (3.12) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11015 8qxs:N (3.12) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11016 8qxt:A (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11017 8qxt:B (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11018 8qxt:C (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11019 8qxt:D (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11020 8qxt:E (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11021 8qxt:F (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11022 8qxt:G (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11023 8qxt:H (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11024 8qxt:I (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11025 8qxt:J (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11026 8qxt:K (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11027 8qxt:L (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11028 8qxt:M (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11029 8qxt:N (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11030 8qxu:H (12.0) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11031 8qxu:I (12.0) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11032 8qxu:J (12.0) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11033 8qxu:K (12.0) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11034 8qxu:L (12.0) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11035 8qxu:M (12.0) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11036 8qxu:N (12.0) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11037 8qxv:H (13.6) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11038 8qxv:I (13.6) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11039 8qxv:J (13.6) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11040 8qxv:K (13.6) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11041 8qxv:L (13.6) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11042 8qxv:M (13.6) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11043 8qxv:N (13.6) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    11044 8qyp:A (2.759) BS01 ADP ? GO:0003774 ... Q9BE39 38014327
    11045 8qyq:A (2.61) BS01 ADP ? GO:0003774 ... Q9BE39 38014327
    11046 8qyq:B (2.61) BS01 ADP ? GO:0003774 ... Q9BE39 38014327
    11047 8qyr:B (1.8) BS03 ADP ? GO:0003774 ... Q9BE39 38014327
    11048 8qyu:A (1.96) BS01 ADP ? GO:0003774 ... Q9BE39 38014327
    11049 8qyu:B (1.96) BS01 ADP ? GO:0003774 ... Q9BE39 38014327
    11050 8r64:F (3.2) BS03 ADP N/A N/A Q6PIW4 39071279
    11051 8r6a:A (2.4) BS01 ADP N/A N/A Q86Y01 39048679
    11052 8r6a:B (2.4) BS01 ADP N/A N/A Q86Y01 39048679
    11053 8r6b:A (2.5) BS01 ADP N/A N/A Q86Y01 39048679
    11054 8rev:A (3.1) BS04 ADP 3.6.4.12 GO:0003677 ... G0RZH0 38806694
    11055 8rfh:A (3.9) BS01 ADP ? GO:0006952 ... A0A0S3ANR1 N/A
    11056 8rfh:B (3.9) BS01 ADP ? GO:0006952 ... A0A0S3ANR1 N/A
    11057 8ri2:A (2.8) BS02 ADP 3.6.4.- N/A Q96P20 38175811
    11058 8rj4:A (2.11) BS01 ADP N/A GO:0000287 ... P69441 39121211
    11059 8rj4:A (2.11) BS02 ADP N/A GO:0000287 ... P69441 39121211
    11060 8rj4:B (2.11) BS01 ADP N/A GO:0000287 ... P69441 39121211
    11061 8rj4:B (2.11) BS02 ADP N/A GO:0000287 ... P69441 39121211
    11062 8rj4:C (2.11) BS01 ADP N/A GO:0000287 ... P69441 39121211
    11063 8rj4:C (2.11) BS02 ADP N/A GO:0000287 ... P69441 39121211
    11064 8rj4:D (2.11) BS01 ADP N/A GO:0000287 ... P69441 39121211
    11065 8rj4:D (2.11) BS02 ADP N/A GO:0000287 ... P69441 39121211
    11066 8rj6:A (1.9) BS02 ADP N/A GO:0000287 ... P69441 39121211
    11067 8rj6:B (1.9) BS01 ADP N/A GO:0000287 ... P69441 39121211
    11068 8rj9:A (1.59) BS01 ADP N/A GO:0000287 ... P69441 39121211
    11069 8rj9:A (1.59) BS02 ADP N/A GO:0000287 ... P69441 39121211
    11070 8rj9:B (1.59) BS01 ADP N/A GO:0000287 ... P69441 39121211
    11071 8rj9:B (1.59) BS02 ADP N/A GO:0000287 ... P69441 39121211
    11072 8rjf:A (3.1) BS01 ADP N/A N/A A0A0H3CDS2 39103374
    11073 8rjf:B (3.1) BS01 ADP N/A N/A A0A0H3CDS2 39103374
    11074 8rjf:C (3.1) BS01 ADP N/A N/A A0A0H3CDS2 39103374
    11075 8rjf:D (3.1) BS01 ADP N/A N/A A0A0H3CDS2 39103374
    11076 8rjf:E (3.1) BS01 ADP N/A N/A A0A0H3CDS2 39103374
    11077 8rjf:F (3.1) BS01 ADP N/A N/A A0A0H3CDS2 39103374
    11078 8rkd:C (3.8) BS01 ADP N/A N/A A0A0H3CDS2 39103374
    11079 8rkd:F (3.8) BS01 ADP N/A N/A A0A0H3CDS2 39103374
    11080 8roa:A (2.4355) BS01 ADP N/A N/A Q14683 39240714
    11081 8roa:C (2.4355) BS01 ADP N/A N/A Q14683 39240714
    11082 8roe:A (1.36) BS01 ADP N/A N/A Q14683 39240714
    11083 8rof:A (1.65) BS01 ADP N/A N/A Q14683 39240714
    11084 8roi:A (2.45) BS01 ADP N/A N/A Q9UQE7 39240714
    11085 8roj:A (3.0) BS01 ADP N/A N/A Q9UQE7 39240714
    11086 8rsb:A (3.4) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11087 8rsb:A (3.4) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11088 8rsb:B (3.4) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11089 8rsb:B (3.4) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11090 8rsb:C (3.4) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11091 8rsb:C (3.4) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11092 8rsb:D (3.4) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11093 8rsb:D (3.4) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11094 8rsb:E (3.4) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11095 8rsb:E (3.4) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11096 8rsb:F (3.4) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11097 8rsb:F (3.4) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11098 8rsc:A (3.6) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11099 8rsc:B (3.6) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11100 8rsc:C (3.6) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11101 8rsc:C (3.6) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11102 8rsc:D (3.6) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11103 8rsc:D (3.6) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11104 8rsc:E (3.6) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11105 8rsc:E (3.6) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11106 8rsc:F (3.6) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11107 8rsc:F (3.6) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    11108 8rtt:A (3.56) BS02 ADP 3.6.4.- GO:0000079 ... P60709 38603491
    11109 8rtt:B (3.56) BS03 ADP 3.6.4.- GO:0000079 ... P60709 38603491
    11110 8rtt:C (3.56) BS03 ADP 3.6.4.- GO:0000079 ... P60709 38603491
    11111 8rtt:D (3.56) BS02 ADP 3.6.4.- GO:0000079 ... P60709 38603491
    11112 8rty:A (6.25) BS01 ADP 3.6.4.- GO:0000079 ... P60709 38603491
    11113 8rty:B (6.25) BS03 ADP 3.6.4.- GO:0000079 ... P60709 38603491
    11114 8rty:C (6.25) BS03 ADP 3.6.4.- GO:0000079 ... P60709 38603491
    11115 8rty:D (6.25) BS02 ADP 3.6.4.- GO:0000079 ... P60709 38603491
    11116 8ru0:A (3.08) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38603491
    11117 8ru0:B (3.08) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38603491
    11118 8ru0:C (3.08) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38603491
    11119 8ru2:B (3.49) BS01 ADP 3.6.4.- GO:0000079 ... P60709 38603491
    11120 8ru2:C (3.49) BS01 ADP 3.6.4.- GO:0000079 ... P60709 38603491
    11121 8ru2:D (3.49) BS01 ADP 3.6.4.- GO:0000079 ... P60709 38603491
    11122 8rv2:A (3.41) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38603491
    11123 8rv2:B (3.41) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38603491
    11124 8rv2:C (3.41) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38603491
    11125 8s91:A (4.3) BS01 ADP 3.6.4.12 GO:0000724 ... Q9UJA3 37309874
    11126 8s91:B (4.3) BS01 ADP 3.6.4.12 GO:0000724 ... Q9UJA3 37309874
    11127 8s91:C (4.3) BS01 ADP 3.6.4.12 GO:0000724 ... Q9UJA3 37309874
    11128 8s91:D (4.3) BS01 ADP 3.6.4.12 GO:0000724 ... Q9NXL9 37309874
    11129 8s91:D (4.3) BS02 ADP 3.6.4.12 GO:0000724 ... Q9NXL9 37309874
    11130 8s91:E (4.3) BS01 ADP 3.6.4.12 GO:0000724 ... Q9NXL9 37309874
    11131 8s91:F (4.3) BS01 ADP 3.6.4.12 GO:0000724 ... Q9NXL9 37309874
    11132 8s94:A (3.94) BS01 ADP 3.6.4.12 GO:0000724 ... Q9UJA3 37309874
    11133 8s94:B (3.94) BS01 ADP 3.6.4.12 GO:0000724 ... Q9UJA3 37309874
    11134 8s94:C (3.94) BS01 ADP 3.6.4.12 GO:0000724 ... Q9UJA3 37309874
    11135 8s94:D (3.94) BS01 ADP 3.6.4.12 GO:0000724 ... Q9NXL9 37309874
    11136 8s94:E (3.94) BS01 ADP 3.6.4.12 GO:0000724 ... Q9NXL9 37309874
    11137 8s94:F (3.94) BS01 ADP 3.6.4.12 GO:0000724 ... Q9NXL9 37309874
    11138 8sbv:B (1.55) BS01 ADP 1.3.1.28 GO:0000166 ... A0A0H3FXS4 N/A
    11139 8sep:A (3.57) BS01 ADP ? GO:0003151 ... P11716 37192614
    11140 8sep:B (3.57) BS01 ADP ? GO:0003151 ... P11716 37192614
    11141 8sep:C (3.57) BS01 ADP ? GO:0003151 ... P11716 37192614
    11142 8sep:D (3.57) BS01 ADP ? GO:0003151 ... P11716 37192614
    11143 8sew:A (2.89) BS01 ADP ? GO:0003151 ... P11716 37192614
    11144 8sew:B (2.89) BS01 ADP ? GO:0003151 ... P11716 37192614
    11145 8sew:C (2.89) BS01 ADP ? GO:0003151 ... P11716 37192614
    11146 8sew:D (2.89) BS01 ADP ? GO:0003151 ... P11716 37192614
    11147 8sfe:A (3.36) BS01 ADP ? GO:0000242 ... P17987 37852256
    11148 8sfe:B (3.36) BS01 ADP ? GO:0002199 ... P78371 37852256
    11149 8sfe:D (3.36) BS01 ADP ? GO:0002199 ... P50991 37852256
    11150 8sfe:E (3.36) BS01 ADP ? GO:0003730 ... P48643 37852256
    11151 8sfe:G (3.36) BS01 ADP ? GO:0002199 ... P49368 37852256
    11152 8sfe:H (3.36) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11153 8sfe:Q (3.36) BS01 ADP ? GO:0002199 ... P50990 37852256
    11154 8sfe:Z (3.36) BS01 ADP ? GO:0003723 ... P40227 37852256
    11155 8sfe:a (3.36) BS01 ADP ? GO:0000242 ... P17987 37852256
    11156 8sfe:b (3.36) BS01 ADP ? GO:0002199 ... P78371 37852256
    11157 8sfe:d (3.36) BS01 ADP ? GO:0002199 ... P50991 37852256
    11158 8sfe:e (3.36) BS01 ADP ? GO:0003730 ... P48643 37852256
    11159 8sfe:g (3.36) BS01 ADP ? GO:0002199 ... P49368 37852256
    11160 8sfe:h (3.36) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11161 8sfe:q (3.36) BS01 ADP ? GO:0002199 ... P50990 37852256
    11162 8sfe:z (3.36) BS01 ADP ? GO:0003723 ... P40227 37852256
    11163 8sff:A (3.2) BS01 ADP ? GO:0000242 ... P17987 37852256
    11164 8sff:B (3.2) BS01 ADP ? GO:0002199 ... P78371 37852256
    11165 8sff:D (3.2) BS01 ADP ? GO:0002199 ... P50991 37852256
    11166 8sff:E (3.2) BS01 ADP ? GO:0003730 ... P48643 37852256
    11167 8sff:G (3.2) BS01 ADP ? GO:0002199 ... P49368 37852256
    11168 8sff:H (3.2) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11169 8sff:Q (3.2) BS01 ADP ? GO:0002199 ... P50990 37852256
    11170 8sff:Z (3.2) BS01 ADP ? GO:0003723 ... P40227 37852256
    11171 8sff:a (3.2) BS01 ADP ? GO:0000242 ... P17987 37852256
    11172 8sff:b (3.2) BS01 ADP ? GO:0002199 ... P78371 37852256
    11173 8sff:d (3.2) BS01 ADP ? GO:0002199 ... P50991 37852256
    11174 8sff:e (3.2) BS01 ADP ? GO:0003730 ... P48643 37852256
    11175 8sff:g (3.2) BS01 ADP ? GO:0002199 ... P49368 37852256
    11176 8sff:h (3.2) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11177 8sff:q (3.2) BS01 ADP ? GO:0002199 ... P50990 37852256
    11178 8sff:z (3.2) BS01 ADP ? GO:0003723 ... P40227 37852256
    11179 8sg8:A (3.0) BS01 ADP ? GO:0000242 ... P17987 37852256
    11180 8sg8:B (3.0) BS01 ADP ? GO:0002199 ... P78371 37852256
    11181 8sg8:D (3.0) BS01 ADP ? GO:0002199 ... P50991 37852256
    11182 8sg8:E (3.0) BS02 ADP ? GO:0003730 ... P48643 37852256
    11183 8sg8:G (3.0) BS01 ADP ? GO:0002199 ... P49368 37852256
    11184 8sg8:H (3.0) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11185 8sg8:Q (3.0) BS01 ADP ? GO:0002199 ... P50990 37852256
    11186 8sg8:Z (3.0) BS01 ADP ? GO:0003723 ... P40227 37852256
    11187 8sg8:a (3.0) BS01 ADP ? GO:0000242 ... P17987 37852256
    11188 8sg8:b (3.0) BS01 ADP ? GO:0002199 ... P78371 37852256
    11189 8sg8:d (3.0) BS01 ADP ? GO:0002199 ... P50991 37852256
    11190 8sg8:e (3.0) BS01 ADP ? GO:0003730 ... P48643 37852256
    11191 8sg8:g (3.0) BS01 ADP ? GO:0002199 ... P49368 37852256
    11192 8sg8:h (3.0) BS01 ADP ? GO:0005515 ... Q99832 37852256
    11193 8sg8:q (3.0) BS01 ADP ? GO:0002199 ... P50990 37852256
    11194 8sg8:z (3.0) BS01 ADP ? GO:0003723 ... P40227 37852256
    11195 8sg9:A (2.9) BS01 ADP ? GO:0000242 ... P17987 37852256
    11196 8sg9:B (2.9) BS01 ADP ? GO:0002199 ... P78371 37852256
    11197 8sg9:D (2.9) BS01 ADP ? GO:0002199 ... P50991 37852256
    11198 8sg9:E (2.9) BS01 ADP ? GO:0003730 ... P48643 37852256
    11199 8sg9:G (2.9) BS01 ADP ? GO:0002199 ... P49368 37852256
    11200 8sg9:H (2.9) BS01 ADP ? GO:0005515 ... Q99832 37852256

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218