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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 12079 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    10201 8fcr:F (4.12) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    10202 8fcr:F (4.12) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    10203 8fct:A (3.42) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    10204 8fct:A (3.42) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    10205 8fct:B (3.42) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    10206 8fct:B (3.42) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    10207 8fct:C (3.42) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    10208 8fct:C (3.42) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    10209 8fct:D (3.42) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    10210 8fct:D (3.42) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    10211 8fct:E (3.42) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    10212 8fct:E (3.42) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    10213 8fct:F (3.42) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    10214 8fct:F (3.42) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 37945741
    10215 8fcy:A (3.4) BS01 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    10216 8fcy:A (3.4) BS03 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    10217 8fcy:A (3.4) BS04 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    10218 8fd6:A (2.9) BS02 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    10219 8fd6:A (2.9) BS03 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    10220 8fd6:A (2.9) BS04 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    10221 8fdt:A (3.2) BS02 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    10222 8fdt:A (3.2) BS03 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    10223 8fdt:A (3.2) BS04 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    10224 8fdu:A (3.3) BS01 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    10225 8fdu:A (3.3) BS02 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    10226 8fkt:NI (2.81) BS02 ADP 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    10227 8fku:NI (2.82) BS02 ADP 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    10228 8fkv:NI (2.47) BS02 ADP 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    10229 8fkw:NI (2.5) BS02 ADP 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    10230 8fkx:NI (2.59) BS02 ADP 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    10231 8fky:NI (2.67) BS02 ADP 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    10232 8fl8:F (4.2) BS01 ADP 7.1.2.2 GO:0005515 ... P00830 38316880
    10233 8fny:A (2.22) BS02 ADP 2.7.11.20 GO:0004674 ... O00418 37068230
    10234 8fny:B (2.22) BS01 ADP ? GO:0000086 ... P0DP23 37068230
    10235 8fny:C (2.22) BS02 ADP 2.7.11.20 GO:0004674 ... O00418 37068230
    10236 8fny:D (2.22) BS01 ADP ? GO:0000086 ... P0DP23 37068230
    10237 8fs3:E (2.93) BS01 ADP ? GO:0000077 ... P38251 37205533
    10238 8fs4:E (2.94) BS02 ADP ? GO:0000077 ... P38251 37205533
    10239 8fs5:E (2.76) BS02 ADP ? GO:0000077 ... P38251 37205533
    10240 8fs6:E (2.9) BS02 ADP ? GO:0000077 ... P38251 37205533
    10241 8fs7:E (2.85) BS02 ADP ? GO:0000077 ... P38251 37205533
    10242 8fs8:E (3.04) BS02 ADP ? GO:0000077 ... P38251 37205533
    10243 8fth:A (3.17) BS01 ADP 3.6.4.12 GO:0004386 ... G0S163 37832548
    10244 8ftm:A (3.01) BS02 ADP 3.6.4.12 GO:0004386 ... G0S163 37832548
    10245 8fv8:AAA (2.05) BS01 ADP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    10246 8fv8:BBB (2.05) BS03 ADP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    10247 8fwi:A (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10248 8fwi:A (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10249 8fwi:B (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10250 8fwi:B (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10251 8fwi:C (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10252 8fwi:C (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10253 8fwi:D (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10254 8fwi:D (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10255 8fwi:E (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10256 8fwi:E (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10257 8fwi:F (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10258 8fwi:F (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10259 8fwi:G (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10260 8fwi:G (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10261 8fwi:H (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10262 8fwi:H (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10263 8fwi:I (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10264 8fwi:I (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10265 8fwi:J (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10266 8fwi:J (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10267 8fwi:K (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10268 8fwi:K (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10269 8fwi:L (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10270 8fwi:L (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10271 8fwj:A (2.7) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10272 8fwj:A (2.7) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10273 8fwj:B (2.7) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10274 8fwj:B (2.7) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10275 8fwj:C (2.7) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10276 8fwj:C (2.7) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10277 8fwj:D (2.7) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10278 8fwj:D (2.7) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10279 8fwj:E (2.7) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10280 8fwj:E (2.7) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10281 8fwj:F (2.7) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10282 8fwj:F (2.7) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10283 8fwj:G (2.7) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10284 8fwj:G (2.7) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10285 8fwj:H (2.7) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10286 8fwj:H (2.7) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10287 8fwj:I (2.7) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10288 8fwj:I (2.7) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10289 8fwj:J (2.7) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10290 8fwj:J (2.7) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10291 8fwj:K (2.7) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10292 8fwj:K (2.7) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10293 8fwj:L (2.7) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10294 8fwj:L (2.7) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10295 8g1e:C (2.8) BS03 ADP 2.3.3.8 GO:0003824 ... P53396 37076498
    10296 8g1e:D (2.8) BS05 ADP 2.3.3.8 GO:0003824 ... P53396 37076498
    10297 8g1f:A (2.4) BS01 ADP 2.3.3.8 GO:0003824 ... P53396 37076498
    10298 8g1f:B (2.4) BS03 ADP 2.3.3.8 GO:0003824 ... P53396 37076498
    10299 8g1f:C (2.4) BS04 ADP 2.3.3.8 GO:0003824 ... P53396 37076498
    10300 8g1f:D (2.4) BS06 ADP 2.3.3.8 GO:0003824 ... P53396 37076498
    10301 8g5c:A (2.2) BS01 ADP 2.3.3.8 GO:0003824 ... P53396 37076498
    10302 8g5d:D (2.5) BS05 ADP 2.3.3.8 GO:0003824 ... P53396 37076498
    10303 8g6p:A (1.45) BS01 ADP 6.3.2.13 GO:0000287 ... G7CMG5 36944394
    10304 8gae:A (3.3) BS01 ADP ? GO:0001890 ... P08238 37069154
    10305 8gft:A (3.8) BS01 ADP ? GO:0001890 ... P08238 37069154
    10306 8gj0:B (2.9) BS03 ADP 2.7.7.7 GO:0003677 ... P06710 N/A
    10307 8gj0:C (2.9) BS03 ADP 2.7.7.7 GO:0003677 ... P06710 N/A
    10308 8gj0:D (2.9) BS03 ADP 2.7.7.7 GO:0003677 ... P06710 N/A
    10309 8gj1:B (3.0) BS03 ADP 2.7.7.7 GO:0003677 ... P06710 N/A
    10310 8gj1:C (3.0) BS03 ADP 2.7.7.7 GO:0003677 ... P06710 N/A
    10311 8gj1:D (3.0) BS03 ADP 2.7.7.7 GO:0003677 ... P06710 N/A
    10312 8gj2:B (2.6) BS02 ADP 2.7.7.7 GO:0003677 ... P06710 N/A
    10313 8gj2:C (2.6) BS02 ADP 2.7.7.7 GO:0003677 ... P06710 N/A
    10314 8gj2:D (2.6) BS02 ADP 2.7.7.7 GO:0003677 ... P06710 N/A
    10315 8gj3:B (2.8) BS03 ADP 2.7.7.7 GO:0003677 ... P06710 N/A
    10316 8gj3:C (2.8) BS03 ADP 2.7.7.7 GO:0003677 ... P06710 N/A
    10317 8gj3:D (2.8) BS03 ADP 2.7.7.7 GO:0003677 ... P06710 N/A
    10318 8gj8:A (2.3) BS01 ADP N/A GO:0003677 ... N/A 37488098
    10319 8gja:A (2.6) BS01 ADP N/A GO:0003677 ... N/A 37488098
    10320 8gja:B (2.6) BS01 ADP N/A GO:0003677 ... N/A 37488098
    10321 8gja:B (2.6) BS02 ADP N/A GO:0003677 ... N/A 37488098
    10322 8gja:C (2.6) BS01 ADP N/A GO:0003677 ... N/A 37488098
    10323 8gja:D (2.6) BS01 ADP N/A GO:0003677 ... N/A 37488098
    10324 8gja:D (2.6) BS02 ADP N/A GO:0003677 ... N/A 37488098
    10325 8gja:E (2.6) BS01 ADP N/A GO:0003677 ... N/A 37488098
    10326 8gja:F (2.6) BS01 ADP N/A GO:0003677 ... N/A 37488098
    10327 8gja:F (2.6) BS02 ADP N/A GO:0003677 ... N/A 37488098
    10328 8glu:E (3.57) BS01 ADP N/A GO:0003677 ... P05846 38834067
    10329 8glw:A (3.51) BS01 ADP N/A GO:0003677 ... P05846 38834067
    10330 8glw:B (3.51) BS01 ADP N/A GO:0003677 ... P05846 38834067
    10331 8glw:D (3.51) BS01 ADP N/A GO:0003677 ... P05846 38834067
    10332 8glw:E (3.51) BS03 ADP N/A GO:0003677 ... P05846 38834067
    10333 8glw:F (3.51) BS02 ADP N/A GO:0003677 ... P05846 38834067
    10334 8glx:A (3.88) BS01 ADP N/A GO:0003677 ... P05846 38834067
    10335 8glx:B (3.88) BS02 ADP N/A GO:0003677 ... P05846 38834067
    10336 8glx:E (3.88) BS01 ADP N/A GO:0003677 ... P05846 38834067
    10337 8glx:F (3.88) BS02 ADP N/A GO:0003677 ... P05846 38834067
    10338 8gm4:A (2.12) BS01 ADP 2.7.11.20 GO:0004674 ... O00418 37172726
    10339 8gm4:B (2.12) BS01 ADP ? GO:0000086 ... P0DP23 37172726
    10340 8gm5:A (2.12) BS01 ADP 2.7.11.20 GO:0004674 ... O00418 37172726
    10341 8gm5:B (2.12) BS01 ADP ? GO:0000086 ... P0DP23 37172726
    10342 8grd:A (2.699) BS02 ADP 1.1.1.41 GO:0000287 ... P50213 36375638
    10343 8grd:B (2.699) BS01 ADP ? GO:0000287 ... O43837 36375638
    10344 8gsu:A (1.5) BS01 ADP 3.6.4.- GO:0000146 ... P68032 37009486
    10345 8gt1:A (1.35) BS01 ADP 3.6.4.- GO:0000146 ... P68032 37009486
    10346 8gt3:A (1.5) BS01 ADP 3.6.4.- GO:0000146 ... P68032 37009486
    10347 8gt5:A (1.4) BS01 ADP 3.6.4.- GO:0000146 ... P68032 37009486
    10348 8guw:A (2.7) BS01 ADP 2.7.11.1 GO:0000212 ... O14965
    Q8TEP8
    37083534
    10349 8guw:B (2.7) BS01 ADP 2.7.11.1 GO:0000212 ... O14965
    Q8TEP8
    37083534
    10350 8guw:C (2.7) BS01 ADP 2.7.11.1 GO:0000212 ... O14965
    Q8TEP8
    37083534
    10351 8gxx:A (3.0) BS01 ADP 7.1.2.2 GO:0005515 ... Q56403 36626983
    10352 8gyk:A (3.14) BS01 ADP ? GO:0000150 ... Q06609 37591853
    10353 8gyk:B (3.14) BS01 ADP ? GO:0000150 ... Q06609 37591853
    10354 8gyk:C (3.14) BS01 ADP ? GO:0000150 ... Q06609 37591853
    10355 8gyk:D (3.14) BS01 ADP ? GO:0000150 ... Q06609 37591853
    10356 8gyk:E (3.14) BS01 ADP ? GO:0000150 ... Q06609 37591853
    10357 8gyk:F (3.14) BS01 ADP ? GO:0000150 ... Q06609 37591853
    10358 8gyk:G (3.14) BS01 ADP ? GO:0000150 ... Q06609 37591853
    10359 8gyk:H (3.14) BS01 ADP ? GO:0000150 ... Q06609 37591853
    10360 8gym:B4 (2.96) BS01 ADP N/A N/A N/A 37248254
    10361 8gym:B8 (2.96) BS02 ADP ? N/A I7M855 37248254
    10362 8gym:B9 (2.96) BS01 ADP ? N/A Q233X7 37248254
    10363 8gym:b4 (2.96) BS01 ADP N/A N/A N/A 37248254
    10364 8gym:b8 (2.96) BS02 ADP ? N/A I7M855 37248254
    10365 8gym:b9 (2.96) BS01 ADP ? N/A Q233X7 37248254
    10366 8gzu:B4 (4.18) BS01 ADP N/A N/A N/A 37248254
    10367 8gzu:B8 (4.18) BS01 ADP ? N/A I7M855 37248254
    10368 8gzu:b4 (4.18) BS01 ADP N/A N/A N/A 37248254
    10369 8gzu:b8 (4.18) BS01 ADP ? N/A I7M855 37248254
    10370 8h3h:A (3.15) BS01 ADP 3.6.1.- GO:0005524 ... Q6PL18 37770645
    10371 8h5y:A (2.7001) BS02 ADP 3.6.4.12 GO:0003677 ... P33919 36614183
    10372 8h5y:B (2.7001) BS02 ADP 3.6.4.12 GO:0003677 ... P33919 36614183
    10373 8h77:A (3.2) BS01 ADP ? GO:0001890 ... P11499 36649707
    10374 8h77:B (3.2) BS01 ADP ? GO:0001890 ... P11499 36649707
    10375 8h9e:D (2.53) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    10376 8h9e:F (2.53) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    10377 8h9i:D (2.77) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    10378 8h9i:F (2.77) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    10379 8h9l:D (2.61) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    10380 8h9l:F (2.61) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    10381 8h9p:B (3.02) BS03 ADP ? GO:0001937 ... P25705 37244256
    10382 8h9p:D (3.02) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    10383 8h9p:F (3.02) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    10384 8h9s:D (2.53) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    10385 8h9s:F (2.53) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    10386 8h9t:D (2.77) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    10387 8h9t:F (2.77) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    10388 8h9u:D (2.61) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    10389 8h9u:F (2.61) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    10390 8h9v:B (3.02) BS03 ADP ? GO:0001937 ... P25705 37244256
    10391 8h9v:D (3.02) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    10392 8h9v:F (3.02) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    10393 8hac:A (2.32) BS01 ADP 3.6.-.- GO:0005524 ... B7G933 38867239
    10394 8hac:B (2.32) BS01 ADP 3.6.-.- GO:0005524 ... B7G933 38867239
    10395 8hh2:D (3.0) BS01 ADP 7.1.2.2 GO:0005515 ... P07677 N/A
    10396 8hh3:D (4.3) BS01 ADP 7.1.2.2 GO:0005515 ... P07677 N/A
    10397 8hh4:D (3.1) BS01 ADP 7.1.2.2 GO:0005515 ... P07677 N/A
    10398 8hh5:D (2.9) BS01 ADP 7.1.2.2 GO:0005515 ... P07677 N/A
    10399 8hh6:D (2.9) BS01 ADP 7.1.2.2 GO:0005515 ... P07677 N/A
    10400 8hh7:C (2.5) BS02 ADP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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